RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 MAGED2Q9UNF1 606 aaPredicted RBP22.23■■□□□ 1.15
SDCBP-209ENST00000522243 PIAS3Q9Y6X2 628 aa22.23■■□□□ 1.15
SDCBP-209ENST00000522243 UBE4BO95155 1302 aa22.23■■□□□ 1.15
SDCBP-209ENST00000522243 DENND4CQ5VZ89 1909 aa22.23■■□□□ 1.15
SDCBP-209ENST00000522243 CACNA1IQ9P0X4 2223 aa22.22■■□□□ 1.15
SDCBP-209ENST00000522243 MAN2B1O00754 1011 aa22.22■■□□□ 1.15
SDCBP-209ENST00000522243 LAMTOR5O43504 91 aa22.22■■□□□ 1.15
SDCBP-209ENST00000522243 DLATP10515 647 aaKnown RBP22.22■■□□□ 1.15
SDCBP-209ENST00000522243 CYP2F1P24903 491 aa22.22■■□□□ 1.15
SDCBP-209ENST00000522243 CDC25CP30307 473 aa22.22■■□□□ 1.15
SDCBP-209ENST00000522243 MYO1EQ12965 1108 aa22.22■■□□□ 1.15
SDCBP-209ENST00000522243 FZD5Q13467 585 aa22.22■■□□□ 1.15
SDCBP-209ENST00000522243 WDR49Q8IV35 697 aa22.22■■□□□ 1.15
SDCBP-209ENST00000522243 TTC8Q8TAM2 541 aa22.22■■□□□ 1.15
SDCBP-209ENST00000522243 CSGALNACT1Q8TDX6 532 aa22.22■■□□□ 1.15
SDCBP-209ENST00000522243 FAM3CQ92520 227 aa22.22■■□□□ 1.15
SDCBP-209ENST00000522243 CLDN23Q96B33 292 aa22.22■■□□□ 1.15
SDCBP-209ENST00000522243 CCDC127Q96BQ5 260 aa22.22■■□□□ 1.15
SDCBP-209ENST00000522243 ZFYVE19Q96K21 471 aa22.22■■□□□ 1.15
SDCBP-209ENST00000522243 SMG9Q9H0W8 520 aaKnown RBP22.22■■□□□ 1.15
SDCBP-209ENST00000522243 TRPV5Q9NQA5 729 aa22.22■■□□□ 1.15
SDCBP-209ENST00000522243 OBSL1O75147 1896 aa22.22■■□□□ 1.15
SDCBP-209ENST00000522243 PVALEFA0A1B0GWK0 134 aa22.21■■□□□ 1.15
SDCBP-209ENST00000522243 ARNTLO00327 626 aa22.21■■□□□ 1.15
SDCBP-209ENST00000522243 CHADO15335 359 aa22.21■■□□□ 1.15
SDCBP-209ENST00000522243 PRAMEF12O95522 483 aa22.21■■□□□ 1.15
SDCBP-209ENST00000522243 HMGA1P17096 107 aaKnown RBP22.21■■□□□ 1.15
SDCBP-209ENST00000522243 TNNI1P19237 187 aa22.21■■□□□ 1.15
SDCBP-209ENST00000522243 CCNE1P24864 410 aa22.21■■□□□ 1.15
SDCBP-209ENST00000522243 LHX1P48742 406 aa22.21■■□□□ 1.15
SDCBP-209ENST00000522243 DDR2Q16832 855 aa22.21■■□□□ 1.15
SDCBP-209ENST00000522243 HS2ST1Q7LGA3 356 aa22.21■■□□□ 1.15
SDCBP-209ENST00000522243 TRAPPC11Q7Z392 1133 aa22.21■■□□□ 1.15
SDCBP-209ENST00000522243 ADSSL1Q8N142 457 aa22.21■■□□□ 1.15
SDCBP-209ENST00000522243 XXYLT1Q8NBI6 393 aa22.21■■□□□ 1.15
SDCBP-209ENST00000522243 FNBP1Q96RU3 617 aa22.21■■□□□ 1.15
SDCBP-209ENST00000522243 PKMYT1Q99640 499 aa22.21■■□□□ 1.15
SDCBP-209ENST00000522243 SLC46A2Q9BY10 475 aa22.21■■□□□ 1.15
SDCBP-209ENST00000522243 ZDHHC9Q9Y397 364 aa22.21■■□□□ 1.15
SDCBP-209ENST00000522243 ZNF638Q14966 1978 aaKnown RBP22.2■■□□□ 1.14
SDCBP-209ENST00000522243 FANCMQ8IYD8 2048 aa22.2■■□□□ 1.14
SDCBP-209ENST00000522243 A0A1B0GVL5 298 aa22.2■■□□□ 1.14
SDCBP-209ENST00000522243 MYBPHLA2RUH7 354 aa22.2■■□□□ 1.14
SDCBP-209ENST00000522243 SLC38A8A6NNN8 435 aa22.2■■□□□ 1.14
SDCBP-209ENST00000522243 GABRDO14764 452 aa22.2■■□□□ 1.14
SDCBP-209ENST00000522243 ACTN4O43707 911 aaKnown RBP22.2■■□□□ 1.14
SDCBP-209ENST00000522243 ATP2C2O75185 946 aa22.2■■□□□ 1.14
SDCBP-209ENST00000522243 CST3P01034 146 aaPredicted RBP22.2■■□□□ 1.14
SDCBP-209ENST00000522243 F11P03951 625 aa22.2■■□□□ 1.14
SDCBP-209ENST00000522243 LMO2P25791 158 aa22.2■■□□□ 1.14
SDCBP-209ENST00000522243 SOX9P48436 509 aa22.2■■□□□ 1.14
SDCBP-209ENST00000522243 NLRP12P59046 1061 aa22.2■■□□□ 1.14
SDCBP-209ENST00000522243 CSTF1Q05048 431 aaKnown RBP22.2■■□□□ 1.14
SDCBP-209ENST00000522243 CYP24A1Q07973 514 aa22.2■■□□□ 1.14
SDCBP-209ENST00000522243 FCHO2Q0JRZ9 810 aa22.2■■□□□ 1.14
SDCBP-209ENST00000522243 TMEM150AQ86TG1 271 aa22.2■■□□□ 1.14
SDCBP-209ENST00000522243 LEO1Q8WVC0 666 aaPredicted RBP22.2■■□□□ 1.14
SDCBP-209ENST00000522243 PAGE5Q96GU1 130 aa22.2■■□□□ 1.14
SDCBP-209ENST00000522243 CGRRF1Q99675 332 aa22.2■■□□□ 1.14
SDCBP-209ENST00000522243 KIF26AQ9ULI4 1882 aaPredicted RBP22.2■■□□□ 1.14
SDCBP-209ENST00000522243 KLRC4O43908 158 aa22.19■■□□□ 1.14
SDCBP-209ENST00000522243 SLFN14P0C7P3 912 aa22.19■■□□□ 1.14
SDCBP-209ENST00000522243 CSH1P0DML2 217 aa22.19■■□□□ 1.14
SDCBP-209ENST00000522243 CSH2P0DML3 217 aa22.19■■□□□ 1.14
SDCBP-209ENST00000522243 PCSK1P29120 753 aa22.19■■□□□ 1.14
SDCBP-209ENST00000522243 MAGEA9P43362 315 aa22.19■■□□□ 1.14
SDCBP-209ENST00000522243 PSMC1P62191 440 aaKnown RBP22.19■■□□□ 1.14
SDCBP-209ENST00000522243 PSMD6Q15008 389 aa22.19■■□□□ 1.14
SDCBP-209ENST00000522243 KNOP1Q1ED39 458 aaKnown RBP22.19■■□□□ 1.14
SDCBP-209ENST00000522243 BMT2Q1RMZ1 405 aa22.19■■□□□ 1.14
SDCBP-209ENST00000522243 TSSK4Q6SA08 328 aa22.19■■□□□ 1.14
SDCBP-209ENST00000522243 SPATA2LQ8IUW3 424 aaPredicted RBP22.19■■□□□ 1.14
SDCBP-209ENST00000522243 SCN4BQ8IWT1 228 aa22.19■■□□□ 1.14
SDCBP-209ENST00000522243 ZNF687Q8N1G0 1237 aa22.19■■□□□ 1.14
SDCBP-209ENST00000522243 MAB21L3Q8N8X9 362 aa22.19■■□□□ 1.14
SDCBP-209ENST00000522243 SPATA18Q8TC71 538 aa22.19■■□□□ 1.14
SDCBP-209ENST00000522243 KBTBD7Q8WVZ9 684 aa22.19■■□□□ 1.14
SDCBP-209ENST00000522243 SPATA32Q96LK8 384 aa22.19■■□□□ 1.14
SDCBP-209ENST00000522243 MMS19Q96T76 1030 aa22.19■■□□□ 1.14
SDCBP-209ENST00000522243 SYT15Q9BQS2 421 aa22.19■■□□□ 1.14
SDCBP-209ENST00000522243 LMAN1LQ9HAT1 526 aa22.19■■□□□ 1.14
SDCBP-209ENST00000522243 PDGFRBP09619 1106 aa22.18■■□□□ 1.14
SDCBP-209ENST00000522243 PFKFB1P16118 471 aa22.18■■□□□ 1.14
SDCBP-209ENST00000522243 RPS9P46781 194 aaKnown RBP22.18■■□□□ 1.14
SDCBP-209ENST00000522243 KPNA1P52294 538 aaPredicted RBP22.18■■□□□ 1.14
SDCBP-209ENST00000522243 SNRPFP62306 86 aaKnown RBP22.18■■□□□ 1.14
SDCBP-209ENST00000522243 RPL10AP62906 217 aaKnown RBP22.18■■□□□ 1.14
SDCBP-209ENST00000522243 STK4Q13043 487 aa22.18■■□□□ 1.14
SDCBP-209ENST00000522243 KMT5BQ4FZB7 885 aa22.18■■□□□ 1.14
SDCBP-209ENST00000522243 TXNDC8Q6A555 127 aa22.18■■□□□ 1.14
SDCBP-209ENST00000522243 ZC3H14Q6PJT7 736 aaKnown RBP22.18■■□□□ 1.14
SDCBP-209ENST00000522243 DPH6Q7L8W6 267 aa22.18■■□□□ 1.14
SDCBP-209ENST00000522243 BPIFB1Q8TDL5 484 aa22.18■■□□□ 1.14
SDCBP-209ENST00000522243 ZNF516Q92618 1163 aa22.18■■□□□ 1.14
SDCBP-209ENST00000522243 OBP2AQ9NY56 170 aa22.18■■□□□ 1.14
SDCBP-209ENST00000522243 GTSE1Q9NYZ3 720 aa22.18■■□□□ 1.14
SDCBP-209ENST00000522243 FBXO4Q9UKT5 387 aa22.18■■□□□ 1.14
SDCBP-209ENST00000522243 EXOC3O60645 756 aa22.17■■□□□ 1.14
SDCBP-209ENST00000522243 LMNAP02545 664 aaKnown RBP22.17■■□□□ 1.14
SDCBP-209ENST00000522243 MTAPQ13126 283 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms