RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 IL31Q6EBC2 164 aa16.9■□□□□ 0.3
USP42-207ENST00000521713 TMEM154Q6P9G4 183 aa16.9■□□□□ 0.3
USP42-207ENST00000521713 CHSY1Q86X52 802 aa16.9■□□□□ 0.3
USP42-207ENST00000521713 MMGT1Q8N4V1 131 aa16.9■□□□□ 0.3
USP42-207ENST00000521713 UBA3Q8TBC4 463 aa16.9■□□□□ 0.3
USP42-207ENST00000521713 YME1L1Q96TA2 773 aa16.9■□□□□ 0.3
USP42-207ENST00000521713 DPP7Q9UHL4 492 aa16.9■□□□□ 0.3
USP42-207ENST00000521713 GTF3C4Q9UKN8 822 aa16.9■□□□□ 0.3
USP42-207ENST00000521713 ATP11BQ9Y2G3 1177 aa16.9■□□□□ 0.3
USP42-207ENST00000521713 SLC4A7Q9Y6M7 1214 aa16.9■□□□□ 0.3
USP42-207ENST00000521713 UBR1Q8IWV7 1749 aa16.9■□□□□ 0.3
USP42-207ENST00000521713 URODP06132 367 aa16.9■□□□□ 0.3
USP42-207ENST00000521713 ATICP31939 592 aa16.9■□□□□ 0.3
USP42-207ENST00000521713 C10orf120Q5SQS8 335 aa16.9■□□□□ 0.3
USP42-207ENST00000521713 SLC5A5Q92911 643 aa16.9■□□□□ 0.3
USP42-207ENST00000521713 BTBD6Q96KE9 485 aa16.9■□□□□ 0.3
USP42-207ENST00000521713 CYP3A43Q9HB55 503 aa16.9■□□□□ 0.3
USP42-207ENST00000521713 AK9Q5TCS8 1911 aa16.9■□□□□ 0.3
USP42-207ENST00000521713 NCAM1P13591 858 aa16.9■□□□□ 0.3
USP42-207ENST00000521713 MAPRE2Q15555 327 aa16.9■□□□□ 0.3
USP42-207ENST00000521713 WDR49Q8IV35 697 aa16.9■□□□□ 0.3
USP42-207ENST00000521713 SPIRE2Q8WWL2 714 aa16.9■□□□□ 0.3
USP42-207ENST00000521713 DCUN1D1Q96GG9 259 aa16.9■□□□□ 0.3
USP42-207ENST00000521713 OSMRQ99650 979 aa16.9■□□□□ 0.3
USP42-207ENST00000521713 SMYD3Q9H7B4 428 aa16.9■□□□□ 0.3
USP42-207ENST00000521713 SARS2Q9NP81 518 aaKnown RBP16.9■□□□□ 0.3
USP42-207ENST00000521713 RARRES1P49788 294 aa16.9■□□□□ 0.3
USP42-207ENST00000521713 NFE2Q16621 373 aaPredicted RBP16.9■□□□□ 0.3
USP42-207ENST00000521713 PTGISQ16647 500 aa16.9■□□□□ 0.3
USP42-207ENST00000521713 HIF1AQ16665 826 aa16.9■□□□□ 0.3
USP42-207ENST00000521713 PPHLN1Q8NEY8 458 aaKnown RBP16.9■□□□□ 0.3
USP42-207ENST00000521713 CBWD1Q9BRT8 395 aa16.9■□□□□ 0.3
USP42-207ENST00000521713 ROPN1BQ9BZX4 212 aaPredicted RBP16.9■□□□□ 0.3
USP42-207ENST00000521713 ROPN1Q9HAT0 212 aaPredicted RBP16.9■□□□□ 0.3
USP42-207ENST00000521713 TRIM17Q9Y577 477 aa16.9■□□□□ 0.3
USP42-207ENST00000521713 MYPNQ86TC9 1320 aa16.9■□□□□ 0.3
USP42-207ENST00000521713 PABPC5Q96DU9 382 aaKnown RBP16.89■□□□□ 0.29
USP42-207ENST00000521713 FOXP3Q9BZS1 431 aa16.89■□□□□ 0.29
USP42-207ENST00000521713 MTMR12Q9C0I1 747 aa16.89■□□□□ 0.29
USP42-207ENST00000521713 MUC3BQ9H195 1237 aa16.89■□□□□ 0.29
USP42-207ENST00000521713 CYB561D2O14569 222 aa16.89■□□□□ 0.29
USP42-207ENST00000521713 ZNF286BP0CG31 522 aa16.89■□□□□ 0.29
USP42-207ENST00000521713 LHX1P48742 406 aa16.89■□□□□ 0.29
USP42-207ENST00000521713 CYP4A22Q5TCH4 519 aa16.89■□□□□ 0.29
USP42-207ENST00000521713 WDR93Q6P2C0 686 aa16.89■□□□□ 0.29
USP42-207ENST00000521713 ATP6V0D2Q8N8Y2 350 aa16.89■□□□□ 0.29
USP42-207ENST00000521713 CDC26Q8NHZ8 85 aa16.89■□□□□ 0.29
USP42-207ENST00000521713 THAP11Q96EK4 314 aa16.89■□□□□ 0.29
USP42-207ENST00000521713 FAM129AQ9BZQ8 928 aa16.89■□□□□ 0.29
USP42-207ENST00000521713 UBA6A0AVT1 1052 aaPredicted RBP16.89■□□□□ 0.29
USP42-207ENST00000521713 GRAP2O75791 330 aa16.89■□□□□ 0.29
USP42-207ENST00000521713 AP1G2O75843 785 aa16.89■□□□□ 0.29
USP42-207ENST00000521713 CABYRO75952 493 aa16.89■□□□□ 0.29
USP42-207ENST00000521713 CCDC15Q0P6D6 951 aa16.89■□□□□ 0.29
USP42-207ENST00000521713 NOGQ13253 232 aa16.89■□□□□ 0.29
USP42-207ENST00000521713 MFSD10Q14728 455 aa16.89■□□□□ 0.29
USP42-207ENST00000521713 TRIM65Q6PJ69 517 aa16.89■□□□□ 0.29
USP42-207ENST00000521713 ARHGEF26Q96DR7 871 aa16.89■□□□□ 0.29
USP42-207ENST00000521713 PALMDQ9NP74 551 aa16.89■□□□□ 0.29
USP42-207ENST00000521713 ADGRB2O60241 1585 aa16.89■□□□□ 0.29
USP42-207ENST00000521713 RNF103-CHMP3A0A140T963 221 aa16.89■□□□□ 0.29
USP42-207ENST00000521713 TCP11X1B4DZS4 312 aa16.89■□□□□ 0.29
USP42-207ENST00000521713 SMAPO00193 183 aa16.89■□□□□ 0.29
USP42-207ENST00000521713 CDH16O75309 829 aa16.89■□□□□ 0.29
USP42-207ENST00000521713 CYP3A4P08684 503 aa16.89■□□□□ 0.29
USP42-207ENST00000521713 RAG1P15918 1043 aa16.89■□□□□ 0.29
USP42-207ENST00000521713 AXLP30530 894 aa16.89■□□□□ 0.29
USP42-207ENST00000521713 MTHFD1LQ6UB35 978 aa16.89■□□□□ 0.29
USP42-207ENST00000521713 KDM7AQ6ZMT4 941 aa16.89■□□□□ 0.29
USP42-207ENST00000521713 SLC26A7Q8TE54 656 aa16.89■□□□□ 0.29
USP42-207ENST00000521713 OSBPL8Q9BZF1 889 aa16.89■□□□□ 0.29
USP42-207ENST00000521713 MRGBPQ9NV56 204 aa16.89■□□□□ 0.29
USP42-207ENST00000521713 ZFATQ9P243 1243 aa16.89■□□□□ 0.29
USP42-207ENST00000521713 DCTN4Q9UJW0 460 aa16.89■□□□□ 0.29
USP42-207ENST00000521713 ATP9BO43861 1147 aa16.88■□□□□ 0.29
USP42-207ENST00000521713 F9P00740 461 aa16.88■□□□□ 0.29
USP42-207ENST00000521713 YY1P25490 414 aa16.88■□□□□ 0.29
USP42-207ENST00000521713 MORF4L2Q15014 288 aa16.88■□□□□ 0.29
USP42-207ENST00000521713 SEZ6Q53EL9 994 aa16.88■□□□□ 0.29
USP42-207ENST00000521713 OTOP1Q7RTM1 612 aa16.88■□□□□ 0.29
USP42-207ENST00000521713 NUDCD3Q8IVD9 361 aa16.88■□□□□ 0.29
USP42-207ENST00000521713 MRPS31Q92665 395 aaKnown RBP16.88■□□□□ 0.29
USP42-207ENST00000521713 NDFIP2Q9NV92 336 aa16.88■□□□□ 0.29
USP42-207ENST00000521713 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.88■□□□□ 0.29
USP42-207ENST00000521713 PLA2G4AP47712 749 aa16.88■□□□□ 0.29
USP42-207ENST00000521713 SLC11A2P49281 568 aa16.88■□□□□ 0.29
USP42-207ENST00000521713 RGMBQ6NW40 437 aa16.88■□□□□ 0.29
USP42-207ENST00000521713 CYB5D1Q6P9G0 228 aa16.88■□□□□ 0.29
USP42-207ENST00000521713 C4orf22Q6V702 233 aa16.88■□□□□ 0.29
USP42-207ENST00000521713 ZNF410Q86VK4 478 aa16.88■□□□□ 0.29
USP42-207ENST00000521713 LCA5Q86VQ0 697 aa16.88■□□□□ 0.29
USP42-207ENST00000521713 RAB42Q8N4Z0 105 aa16.88■□□□□ 0.29
USP42-207ENST00000521713 ZNF518BQ9C0D4 1074 aa16.88■□□□□ 0.29
USP42-207ENST00000521713 C2CD2LO14523 706 aa16.88■□□□□ 0.29
USP42-207ENST00000521713 CHN1P15882 459 aa16.88■□□□□ 0.29
USP42-207ENST00000521713 CNTN2Q02246 1040 aa16.88■□□□□ 0.29
USP42-207ENST00000521713 POU5F1BQ06416 359 aa16.88■□□□□ 0.29
USP42-207ENST00000521713 KPNB1Q14974 876 aaKnown RBP16.88■□□□□ 0.29
USP42-207ENST00000521713 UGP2Q16851 508 aa16.88■□□□□ 0.29
USP42-207ENST00000521713 CENPPQ6IPU0 288 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms