RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 ERCC4Q92889 916 aaPredicted RBP19.15■□□□□ 0.66
TRAPPC9-211ENST00000521700 SMARCD2Q92925 531 aa19.15■□□□□ 0.66
TRAPPC9-211ENST00000521700 TIGD1Q96MW7 591 aa19.15■□□□□ 0.66
TRAPPC9-211ENST00000521700 MRPL45Q9BRJ2 306 aaKnown RBP19.15■□□□□ 0.66
TRAPPC9-211ENST00000521700 GPR88Q9GZN0 384 aa19.15■□□□□ 0.66
TRAPPC9-211ENST00000521700 ZFP14Q9HCL3 533 aa19.15■□□□□ 0.66
TRAPPC9-211ENST00000521700 NME7Q9Y5B8 376 aa19.15■□□□□ 0.66
TRAPPC9-211ENST00000521700 MUC6Q6W4X9 2439 aa19.15■□□□□ 0.66
TRAPPC9-211ENST00000521700 MAPK13O15264 365 aa19.14■□□□□ 0.65
TRAPPC9-211ENST00000521700 PI15O43692 258 aa19.14■□□□□ 0.65
TRAPPC9-211ENST00000521700 TACC1O75410 805 aa19.14■□□□□ 0.65
TRAPPC9-211ENST00000521700 FAM163BP0C2L3 166 aa19.14■□□□□ 0.65
TRAPPC9-211ENST00000521700 NR2F2P24468 414 aa19.14■□□□□ 0.65
TRAPPC9-211ENST00000521700 CYP2F1P24903 491 aa19.14■□□□□ 0.65
TRAPPC9-211ENST00000521700 GABRR2P28476 465 aa19.14■□□□□ 0.65
TRAPPC9-211ENST00000521700 GPR15P49685 360 aa19.14■□□□□ 0.65
TRAPPC9-211ENST00000521700 BIRC3Q13489 604 aa19.14■□□□□ 0.65
TRAPPC9-211ENST00000521700 ZCWPW2Q504Y3 356 aa19.14■□□□□ 0.65
TRAPPC9-211ENST00000521700 C1orf220Q5T0J3 134 aa19.14■□□□□ 0.65
TRAPPC9-211ENST00000521700 STXBP5Q5T5C0 1151 aa19.14■□□□□ 0.65
TRAPPC9-211ENST00000521700 SYAP1Q96A49 352 aaPredicted RBP19.14■□□□□ 0.65
TRAPPC9-211ENST00000521700 SYT15Q9BQS2 421 aa19.14■□□□□ 0.65
TRAPPC9-211ENST00000521700 ATXN3LQ9H3M9 355 aa19.14■□□□□ 0.65
TRAPPC9-211ENST00000521700 IL21Q9HBE4 155 aa19.14■□□□□ 0.65
TRAPPC9-211ENST00000521700 ABCB6Q9NP58 842 aa19.14■□□□□ 0.65
TRAPPC9-211ENST00000521700 CRTAC1Q9NQ79 661 aa19.14■□□□□ 0.65
TRAPPC9-211ENST00000521700 ARHGEF3Q9NR81 526 aa19.14■□□□□ 0.65
TRAPPC9-211ENST00000521700 RMND1Q9NWS8 449 aa19.14■□□□□ 0.65
TRAPPC9-211ENST00000521700 NXF1Q9UBU9 619 aaKnown RBP19.14■□□□□ 0.65
TRAPPC9-211ENST00000521700 CDH9Q9ULB4 789 aa19.14■□□□□ 0.65
TRAPPC9-211ENST00000521700 PCDHA5Q9Y5H7 936 aa19.14■□□□□ 0.65
TRAPPC9-211ENST00000521700 GADD45BO75293 160 aaPredicted RBP19.13■□□□□ 0.65
TRAPPC9-211ENST00000521700 AKAP3O75969 853 aa19.13■□□□□ 0.65
TRAPPC9-211ENST00000521700 VNN1O95497 513 aa19.13■□□□□ 0.65
TRAPPC9-211ENST00000521700 FGF19O95750 216 aa19.13■□□□□ 0.65
TRAPPC9-211ENST00000521700 HMGA1P17096 107 aaKnown RBP19.13■□□□□ 0.65
TRAPPC9-211ENST00000521700 AOC1P19801 751 aa19.13■□□□□ 0.65
TRAPPC9-211ENST00000521700 GNL1P36915 607 aaPredicted RBP19.13■□□□□ 0.65
TRAPPC9-211ENST00000521700 VIPR2P41587 438 aa19.13■□□□□ 0.65
TRAPPC9-211ENST00000521700 PSMC1P62191 440 aaKnown RBP19.13■□□□□ 0.65
TRAPPC9-211ENST00000521700 TNNC1P63316 161 aa19.13■□□□□ 0.65
TRAPPC9-211ENST00000521700 ADAM9Q13443 819 aa19.13■□□□□ 0.65
TRAPPC9-211ENST00000521700 DDR2Q16832 855 aa19.13■□□□□ 0.65
TRAPPC9-211ENST00000521700 SDHAF4Q5VUM1 108 aa19.13■□□□□ 0.65
TRAPPC9-211ENST00000521700 SPATA2LQ8IUW3 424 aaPredicted RBP19.13■□□□□ 0.65
TRAPPC9-211ENST00000521700 SPATA20Q8TB22 786 aa19.13■□□□□ 0.65
TRAPPC9-211ENST00000521700 GSDMAQ96QA5 445 aa19.13■□□□□ 0.65
TRAPPC9-211ENST00000521700 PRRX2Q99811 253 aa19.13■□□□□ 0.65
TRAPPC9-211ENST00000521700 MKNK1Q9BUB5 465 aa19.13■□□□□ 0.65
TRAPPC9-211ENST00000521700 VRTNQ9H8Y1 702 aa19.13■□□□□ 0.65
TRAPPC9-211ENST00000521700 TRPV4Q9HBA0 871 aa19.13■□□□□ 0.65
TRAPPC9-211ENST00000521700 STK25O00506 426 aa19.12■□□□□ 0.65
TRAPPC9-211ENST00000521700 IKBKBO14920 756 aa19.12■□□□□ 0.65
TRAPPC9-211ENST00000521700 SMC2O95347 1197 aa19.12■□□□□ 0.65
TRAPPC9-211ENST00000521700 RPL13P26373 211 aaKnown RBP19.12■□□□□ 0.65
TRAPPC9-211ENST00000521700 PRCPP42785 496 aa19.12■□□□□ 0.65
TRAPPC9-211ENST00000521700 VAMP7P51809 220 aa19.12■□□□□ 0.65
TRAPPC9-211ENST00000521700 RPL10AP62906 217 aaKnown RBP19.12■□□□□ 0.65
TRAPPC9-211ENST00000521700 NCOA4Q13772 614 aa19.12■□□□□ 0.65
TRAPPC9-211ENST00000521700 TAF12Q16514 161 aa19.12■□□□□ 0.65
TRAPPC9-211ENST00000521700 ZACNQ401N2 412 aa19.12■□□□□ 0.65
TRAPPC9-211ENST00000521700 CFAP221Q4G0U5 840 aa19.12■□□□□ 0.65
TRAPPC9-211ENST00000521700 ZNF658Q5TYW1 1059 aaPredicted RBP19.12■□□□□ 0.65
TRAPPC9-211ENST00000521700 SV2AQ7L0J3 742 aa19.12■□□□□ 0.65
TRAPPC9-211ENST00000521700 STKLD1Q8NE28 680 aa19.12■□□□□ 0.65
TRAPPC9-211ENST00000521700 OR6B3Q8NGW1 331 aa19.12■□□□□ 0.65
TRAPPC9-211ENST00000521700 ELMO3Q96BJ8 720 aa19.12■□□□□ 0.65
TRAPPC9-211ENST00000521700 FUBP3Q96I24 572 aaKnown RBP eCLIP19.12■□□□□ 0.65
TRAPPC9-211ENST00000521700 SNX25Q9H3E2 840 aa19.12■□□□□ 0.65
TRAPPC9-211ENST00000521700 SLITRK6Q9H5Y7 841 aa19.12■□□□□ 0.65
TRAPPC9-211ENST00000521700 TBC1D17Q9HA65 648 aa19.12■□□□□ 0.65
TRAPPC9-211ENST00000521700 NCANO14594 1321 aa19.11■□□□□ 0.65
TRAPPC9-211ENST00000521700 HOXD11P31277 338 aaPredicted RBP19.11■□□□□ 0.65
TRAPPC9-211ENST00000521700 PSMC2P35998 433 aaKnown RBP19.11■□□□□ 0.65
TRAPPC9-211ENST00000521700 NUBP1P53384 320 aa19.11■□□□□ 0.65
TRAPPC9-211ENST00000521700 PFKPQ01813 784 aa19.11■□□□□ 0.65
TRAPPC9-211ENST00000521700 TCF15Q12870 199 aa19.11■□□□□ 0.65
TRAPPC9-211ENST00000521700 GRM2Q14416 872 aa19.11■□□□□ 0.65
TRAPPC9-211ENST00000521700 ZNF699Q32M78 642 aa19.11■□□□□ 0.65
TRAPPC9-211ENST00000521700 SLC44A4Q53GD3 710 aa19.11■□□□□ 0.65
TRAPPC9-211ENST00000521700 GPR158Q5T848 1215 aa19.11■□□□□ 0.65
TRAPPC9-211ENST00000521700 PHLDB3Q6NSJ2 640 aa19.11■□□□□ 0.65
TRAPPC9-211ENST00000521700 VITQ6UXI7 678 aa19.11■□□□□ 0.65
TRAPPC9-211ENST00000521700 C4orf50Q6ZRC1 276 aa19.11■□□□□ 0.65
TRAPPC9-211ENST00000521700 TMEM150AQ86TG1 271 aa19.11■□□□□ 0.65
TRAPPC9-211ENST00000521700 GPIHBP1Q8IV16 184 aa19.11■□□□□ 0.65
TRAPPC9-211ENST00000521700 ELOA2Q8IYF1 753 aaPredicted RBP19.11■□□□□ 0.65
TRAPPC9-211ENST00000521700 FAM186BQ8IYM0 893 aa19.11■□□□□ 0.65
TRAPPC9-211ENST00000521700 SMARCE1Q969G3 411 aa19.11■□□□□ 0.65
TRAPPC9-211ENST00000521700 MYLPFQ96A32 169 aa19.11■□□□□ 0.65
TRAPPC9-211ENST00000521700 MAGEC2Q9UBF1 373 aaPredicted RBP19.11■□□□□ 0.65
TRAPPC9-211ENST00000521700 HOOK1Q9UJC3 728 aaKnown RBP19.11■□□□□ 0.65
TRAPPC9-211ENST00000521700 F11P03951 625 aa19.1■□□□□ 0.65
TRAPPC9-211ENST00000521700 CSH1P0DML2 217 aa19.1■□□□□ 0.65
TRAPPC9-211ENST00000521700 CSH2P0DML3 217 aa19.1■□□□□ 0.65
TRAPPC9-211ENST00000521700 PSMC3P17980 439 aa19.1■□□□□ 0.65
TRAPPC9-211ENST00000521700 CDC25CP30307 473 aa19.1■□□□□ 0.65
TRAPPC9-211ENST00000521700 MAGEA11P43364 429 aa19.1■□□□□ 0.65
TRAPPC9-211ENST00000521700 CDH8P55286 799 aa19.1■□□□□ 0.65
TRAPPC9-211ENST00000521700 STARD6P59095 220 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms