RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 MIF4GDA9UHW6 222 aaKnown RBP10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 K7ENM7 598 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 LMNAP02545 664 aaKnown RBP10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 SP4Q02446 784 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 CDC16Q13042 620 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 MFSD5Q6N075 450 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 MARK2Q7KZI7 788 aaKnown RBP10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 TRABD2AQ86V40 505 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 RAVER1Q8IY67 606 aaKnown RBP10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 RBM15BQ8NDT2 890 aaKnown RBP10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 ECSITQ9BQ95 431 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 MANSC1Q9H8J5 431 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 CNGB3Q9NQW8 809 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 AKAP11Q9UKA4 1901 aa10.58□□□□□ -0.71
PDGFRB-207ENST00000520579 TOM1L1O75674 476 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 WFS1O76024 890 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 OXSR1O95747 527 aaPredicted RBP10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 BAG3O95817 575 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 MT-ND3P03897 115 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 MSL3P1P0C860 447 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 PEX2P28328 305 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 IL6STP40189 918 aaPredicted RBP10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 PRKCIP41743 596 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 AQP4P55087 323 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 AP1B1Q10567 949 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 AGAP9Q5VTM2 703 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 DUS1LQ6P1R4 473 aaKnown RBP10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 KLC3Q6P597 504 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 CLEC4GQ6UXB4 293 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 RHPN2Q8IUC4 686 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 SEPT12Q8IYM1 358 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 INPP5DQ92835 1189 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 APOL6Q9BWW8 343 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 PCYOX1Q9UHG3 505 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 EDIL3O43854 480 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 FAM155BO75949 473 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 POTEJP0CG39 1038 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 ITIH2P19823 946 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 BMPR2Q13873 1038 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 CLPPQ16740 277 aaPredicted RBP10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 SFT2D3Q587I9 215 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 CCDC174Q6PII3 467 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 LRRC43Q8N309 656 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 CCDC33Q8N5R6 958 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 ZNF280CQ8ND82 737 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 NAT14Q8WUY8 206 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 CFAP36Q96G28 342 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 CBWD1Q9BRT8 395 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 TMEM121Q9BTD3 319 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 ANO3Q9BYT9 981 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 GLT8D2Q9H1C3 349 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 HOMER2Q9NSB8 354 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 STARD13Q9Y3M8 1113 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 TIMM22Q9Y584 194 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 ABCB11O95342 1321 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 ARFGEF2Q9Y6D5 1785 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 TGFB1I1O43294 461 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 LPXNO60711 386 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 PPP1R11O60927 126 aaPredicted RBP10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 PHEXP78562 749 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 GSTM4Q03013 218 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 C11orf63Q6NUN7 778 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 PRR23CQ6ZRP0 262 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 CFAP57Q96MR6 1250 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 DCUN1D5Q9BTE7 237 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 KIFC3Q9BVG8 833 aa10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 LARSQ9P2J5 1176 aaKnown RBP10.58□□□□□ -0.72
PDGFRB-207ENST00000520579 CAPN8A6NHC0 703 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 CYB561D2O14569 222 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 RIMBP2O15034 1052 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 DGKIO75912 1065 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 NFAT5O94916 1531 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 CFBP00751 764 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 VDRP11473 427 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 NCF2P19878 526 aaPredicted RBP10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 TCN1P20061 433 aaPredicted RBP10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 S100A1P23297 94 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 VARSP26640 1264 aaKnown RBP10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 BASP1P80723 227 aaKnown RBP10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 PPP3CAQ08209 521 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 CETN1Q12798 172 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 CYLC2Q14093 348 aaPredicted RBP10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 RALGPS1Q5JS13 557 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 TMTC4Q5T4D3 741 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 PTAR1Q7Z6K3 402 aaPredicted RBP10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 RNF169Q8NCN4 708 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 DQX1Q8TE96 717 aaKnown RBP10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 PYROXD1Q8WU10 500 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 IFT122Q9HBG6 1241 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 PCDHA2Q9Y5H9 948 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 KDM3AQ9Y4C1 1321 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 EML1O00423 815 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 WDR46O15213 610 aaKnown RBP10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 TOP3BO95985 862 aaKnown RBP10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 PCYT1AP49585 367 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 JAM2P57087 298 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 AP2B1P63010 937 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 STAT4Q14765 748 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 NKX1-1Q15270 411 aaPredicted RBP10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 EDRF1Q3B7T1 1238 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms