RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 SYT10Q6XYQ8 523 aa9.06□□□□□ -0.96
VAPB-206ENST00000520497 TRIM72Q6ZMU5 477 aa9.06□□□□□ -0.96
VAPB-206ENST00000520497 ZNF365Q70YC5 407 aa9.06□□□□□ -0.96
VAPB-206ENST00000520497 CRYBG2Q8N1P7 616 aa9.06□□□□□ -0.96
VAPB-206ENST00000520497 HASPINQ8TF76 798 aa9.06□□□□□ -0.96
VAPB-206ENST00000520497 SECISBP2LQ93073 1101 aaKnown RBP9.06□□□□□ -0.96
VAPB-206ENST00000520497 CALR3Q96L12 384 aaKnown RBP9.06□□□□□ -0.96
VAPB-206ENST00000520497 FAM193BQ96PV7 902 aaPredicted RBP9.06□□□□□ -0.96
VAPB-206ENST00000520497 PACSIN1Q9BY11 444 aa9.06□□□□□ -0.96
VAPB-206ENST00000520497 DNAI2Q9GZS0 605 aa9.06□□□□□ -0.96
VAPB-206ENST00000520497 CWH43Q9H720 699 aa9.06□□□□□ -0.96
VAPB-206ENST00000520497 MARCH5Q9NX47 278 aa9.06□□□□□ -0.96
VAPB-206ENST00000520497 MTMR10Q9NXD2 777 aa9.06□□□□□ -0.96
VAPB-206ENST00000520497 TAS2R14Q9NYV8 317 aa9.06□□□□□ -0.96
VAPB-206ENST00000520497 KIAA1257Q9ULG3 409 aa9.06□□□□□ -0.96
VAPB-206ENST00000520497 GUCA1BQ9UMX6 200 aa9.06□□□□□ -0.96
VAPB-206ENST00000520497 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.06□□□□□ -0.96
VAPB-206ENST00000520497 TFR2Q9UP52 801 aa9.06□□□□□ -0.96
VAPB-206ENST00000520497 NCANO14594 1321 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 ANAPC1Q9H1A4 1944 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 ARHGEF37A1IGU5 675 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 ANKRD62A6NC57 917 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 A8MXQ7 604 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 I3L4J1 428 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 O00370 1275 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 NRP1O14786 923 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 HCRTO43612 131 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 UPP2O95045 317 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 LSM8O95777 96 aaKnown RBP9.05□□□□□ -0.96
VAPB-206ENST00000520497 EFEMP2O95967 443 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 FGBP02675 491 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 GALTP07902 379 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 VDRP11473 427 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 CD19P15391 556 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 LMO2P25791 158 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 GNL1P36915 607 aaPredicted RBP9.05□□□□□ -0.96
VAPB-206ENST00000520497 OR1G1P47890 313 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 LHX1P48742 406 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 SLC11A1P49279 550 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 NUBP1P53384 320 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 GALCP54803 685 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 NAP1L1P55209 391 aaKnown RBP9.05□□□□□ -0.96
VAPB-206ENST00000520497 STILQ15468 1287 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 CNGA2Q16280 664 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 PKDCCQ504Y2 493 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 SGO2Q562F6 1265 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 ZNF569Q5MCW4 686 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 ARHGAP17Q68EM7 881 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 ACAD10Q6JQN1 1059 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 LCLAT1Q6UWP7 414 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 DSTYKQ6XUX3 929 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 OTOP2Q7RTS6 562 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 DNAAF5Q86Y56 855 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 RNF10Q8N5U6 811 aaKnown RBP9.05□□□□□ -0.96
VAPB-206ENST00000520497 TRIM58Q8NG06 486 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 OR6B3Q8NGW1 331 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 CYFIP2Q96F07 1278 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 GUCD1Q96NT3 240 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 NOX5Q96PH1 765 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 NAPGQ99747 312 aaPredicted RBP9.05□□□□□ -0.96
VAPB-206ENST00000520497 RTP3Q9BQQ7 232 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.05□□□□□ -0.96
VAPB-206ENST00000520497 SNX25Q9H3E2 840 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 DPEP3Q9H4B8 488 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 SEPT11Q9NVA2 429 aaKnown RBP9.05□□□□□ -0.96
VAPB-206ENST00000520497 TRIM10Q9UDY6 481 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 ADAM28Q9UKQ2 775 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 DSEQ9UL01 958 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 PCDHB8Q9UN66 801 aa9.05□□□□□ -0.96
VAPB-206ENST00000520497 COL4A4P53420 1690 aaPredicted RBP9.04□□□□□ -0.96
VAPB-206ENST00000520497 A0A0A6YYK5 440 aaPredicted RBP9.04□□□□□ -0.96
VAPB-206ENST00000520497 SYN3O14994 580 aa9.04□□□□□ -0.96
VAPB-206ENST00000520497 ATMINO43313 823 aaPredicted RBP9.04□□□□□ -0.96
VAPB-206ENST00000520497 MED7O43513 233 aa9.04□□□□□ -0.96
VAPB-206ENST00000520497 URI1O94763 535 aaPredicted RBP9.04□□□□□ -0.96
VAPB-206ENST00000520497 GJB5O95377 273 aa9.04□□□□□ -0.96
VAPB-206ENST00000520497 FTLP02792 175 aaPredicted RBP9.04□□□□□ -0.96
VAPB-206ENST00000520497 H2AFZP0C0S5 128 aa9.04□□□□□ -0.96
VAPB-206ENST00000520497 TMEM253P0C7T8 217 aa9.04□□□□□ -0.96
VAPB-206ENST00000520497 BCAR1P56945 870 aa9.04□□□□□ -0.96
VAPB-206ENST00000520497 HTRA4P83105 476 aaPredicted RBP9.04□□□□□ -0.96
VAPB-206ENST00000520497 PTP4A2Q12974 167 aa9.04□□□□□ -0.96
VAPB-206ENST00000520497 PPP1R26Q5T8A7 1209 aaPredicted RBP9.04□□□□□ -0.96
VAPB-206ENST00000520497 KIAA0319Q5VV43 1072 aa9.04□□□□□ -0.96
VAPB-206ENST00000520497 NAA35Q5VZE5 725 aa9.04□□□□□ -0.96
VAPB-206ENST00000520497 H2AFVQ71UI9 128 aa9.04□□□□□ -0.96
VAPB-206ENST00000520497 MON1BQ7L1V2 547 aa9.04□□□□□ -0.96
VAPB-206ENST00000520497 TMCO2Q7Z6W1 182 aaPredicted RBP9.04□□□□□ -0.96
VAPB-206ENST00000520497 ACOT1Q86TX2 421 aa9.04□□□□□ -0.96
VAPB-206ENST00000520497 TMEM173Q86WV6 379 aaPredicted RBP9.04□□□□□ -0.96
VAPB-206ENST00000520497 PHF13Q86YI8 300 aaPredicted RBP9.04□□□□□ -0.96
VAPB-206ENST00000520497 CMTR2Q8IYT2 770 aaKnown RBP9.04□□□□□ -0.96
VAPB-206ENST00000520497 RNF168Q8IYW5 571 aaPredicted RBP9.04□□□□□ -0.96
VAPB-206ENST00000520497 WDTC1Q8N5D0 677 aa9.04□□□□□ -0.96
VAPB-206ENST00000520497 C12orf29Q8N999 325 aa9.04□□□□□ -0.96
VAPB-206ENST00000520497 B3GALNT2Q8NCR0 500 aa9.04□□□□□ -0.96
VAPB-206ENST00000520497 BCL7CQ8WUZ0 217 aaPredicted RBP9.04□□□□□ -0.96
VAPB-206ENST00000520497 CTNNBL1Q8WYA6 563 aaPredicted RBP9.04□□□□□ -0.96
VAPB-206ENST00000520497 HERVK_113Q902F9 699 aa9.04□□□□□ -0.96
VAPB-206ENST00000520497 TNIP3Q96KP6 325 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms