RNA–Protein interactions for RNA: ENST00000514219.1

TRIM41-206, Transcript of tripartite motif containing 41, humanhuman

TSL 5

Gene TRIM41, Length 459 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-206ENST00000514219 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.95■□□□□ 0.3
TRIM41-206ENST00000514219 EPS8L1Q8TE68 723 aa16.95■□□□□ 0.3
TRIM41-206ENST00000514219 CALR3Q96L12 384 aaKnown RBP16.95■□□□□ 0.3
TRIM41-206ENST00000514219 ACBD6Q9BR61 282 aa16.95■□□□□ 0.3
TRIM41-206ENST00000514219 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.95■□□□□ 0.3
TRIM41-206ENST00000514219 TSGA10Q9BZW7 698 aa16.95■□□□□ 0.3
TRIM41-206ENST00000514219 GPR88Q9GZN0 384 aa16.95■□□□□ 0.3
TRIM41-206ENST00000514219 HAUS4Q9H6D7 363 aa16.95■□□□□ 0.3
TRIM41-206ENST00000514219 PUF60Q9UHX1 559 aaKnown RBP16.95■□□□□ 0.3
TRIM41-206ENST00000514219 POLIQ9UNA4 740 aa16.95■□□□□ 0.3
TRIM41-206ENST00000514219 ZNF318Q5VUA4 2279 aa16.95■□□□□ 0.3
TRIM41-206ENST00000514219 C5orf42Q9H799 3197 aa16.95■□□□□ 0.3
TRIM41-206ENST00000514219 LCHNA4D1U4 455 aa16.94■□□□□ 0.3
TRIM41-206ENST00000514219 OR6C75A6NL08 312 aa16.94■□□□□ 0.3
TRIM41-206ENST00000514219 EIF3CLB5ME19 914 aaKnown RBP16.94■□□□□ 0.3
TRIM41-206ENST00000514219 GABRDO14764 452 aa16.94■□□□□ 0.3
TRIM41-206ENST00000514219 PPEF2O14830 753 aa16.94■□□□□ 0.3
TRIM41-206ENST00000514219 THAP12O43422 761 aa16.94■□□□□ 0.3
TRIM41-206ENST00000514219 CD19P15391 556 aa16.94■□□□□ 0.3
TRIM41-206ENST00000514219 KCNA5P22460 613 aa16.94■□□□□ 0.3
TRIM41-206ENST00000514219 MSNP26038 577 aaKnown RBP16.94■□□□□ 0.3
TRIM41-206ENST00000514219 SLC11A1P49279 550 aa16.94■□□□□ 0.3
TRIM41-206ENST00000514219 KIF11P52732 1056 aa16.94■□□□□ 0.3
TRIM41-206ENST00000514219 USP41Q3LFD5 358 aa16.94■□□□□ 0.3
TRIM41-206ENST00000514219 TIGD5Q53EQ6 642 aa16.94■□□□□ 0.3
TRIM41-206ENST00000514219 KIAA1841Q6NSI8 718 aa16.94■□□□□ 0.3
TRIM41-206ENST00000514219 FUT10Q6P4F1 479 aa16.94■□□□□ 0.3
TRIM41-206ENST00000514219 CRYBG2Q8N1P7 616 aa16.94■□□□□ 0.3
TRIM41-206ENST00000514219 SP7Q8TDD2 431 aaPredicted RBP16.94■□□□□ 0.3
TRIM41-206ENST00000514219 KAT5Q92993 513 aa16.94■□□□□ 0.3
TRIM41-206ENST00000514219 FAM84AQ96KN4 292 aa16.94■□□□□ 0.3
TRIM41-206ENST00000514219 HEXIM2Q96MH2 286 aaKnown RBP16.94■□□□□ 0.3
TRIM41-206ENST00000514219 EIF3CQ99613 913 aaKnown RBP16.94■□□□□ 0.3
TRIM41-206ENST00000514219 AGPAT1Q99943 283 aa16.94■□□□□ 0.3
TRIM41-206ENST00000514219 CXCL16Q9H2A7 254 aa16.94■□□□□ 0.3
TRIM41-206ENST00000514219 SEPT11Q9NVA2 429 aaKnown RBP16.94■□□□□ 0.3
TRIM41-206ENST00000514219 L1RE1Q9UN81 338 aa16.94■□□□□ 0.3
TRIM41-206ENST00000514219 SCN1AP35498 2009 aa16.93■□□□□ 0.3
TRIM41-206ENST00000514219 SPTLC1O15269 473 aa16.93■□□□□ 0.3
TRIM41-206ENST00000514219 OAZ2O95190 189 aa16.93■□□□□ 0.3
TRIM41-206ENST00000514219 NDUFA10O95299 355 aa16.93■□□□□ 0.3
TRIM41-206ENST00000514219 GZMAP12544 262 aa16.93■□□□□ 0.3
TRIM41-206ENST00000514219 EIF4A3P38919 411 aaKnown RBP16.93■□□□□ 0.3
TRIM41-206ENST00000514219 CCZ1BP86790 482 aa16.93■□□□□ 0.3
TRIM41-206ENST00000514219 CCZ1P86791 482 aaPredicted RBP16.93■□□□□ 0.3
TRIM41-206ENST00000514219 NFE2Q16621 373 aaPredicted RBP16.93■□□□□ 0.3
TRIM41-206ENST00000514219 HGSNATQ68CP4 663 aa16.93■□□□□ 0.3
TRIM41-206ENST00000514219 PTCRAQ6ISU1 281 aaPredicted RBP16.93■□□□□ 0.3
TRIM41-206ENST00000514219 FAM117BQ6P1L5 589 aa16.93■□□□□ 0.3
TRIM41-206ENST00000514219 WDR59Q6PJI9 974 aa16.93■□□□□ 0.3
TRIM41-206ENST00000514219 C4orf50Q6ZRC1 276 aa16.93■□□□□ 0.3
TRIM41-206ENST00000514219 COLGALT1Q8NBJ5 622 aa16.93■□□□□ 0.3
TRIM41-206ENST00000514219 TMEM35BQ8NCS4 154 aa16.93■□□□□ 0.3
TRIM41-206ENST00000514219 CLP1Q92989 425 aaKnown RBP16.93■□□□□ 0.3
TRIM41-206ENST00000514219 IGSF21Q96ID5 467 aa16.93■□□□□ 0.3
TRIM41-206ENST00000514219 TTPALQ9BTX7 342 aa16.93■□□□□ 0.3
TRIM41-206ENST00000514219 CWH43Q9H720 699 aa16.93■□□□□ 0.3
TRIM41-206ENST00000514219 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.93■□□□□ 0.3
TRIM41-206ENST00000514219 DDX43Q9NXZ2 648 aaKnown RBP16.93■□□□□ 0.3
TRIM41-206ENST00000514219 ARHGAP20Q9P2F6 1191 aa16.93■□□□□ 0.3
TRIM41-206ENST00000514219 DNAJB4Q9UDY4 337 aa16.93■□□□□ 0.3
TRIM41-206ENST00000514219 INTUQ9ULD6 942 aa16.93■□□□□ 0.3
TRIM41-206ENST00000514219 PCDHGC3Q9UN70 934 aa16.93■□□□□ 0.3
TRIM41-206ENST00000514219 EPN1Q9Y6I3 576 aaPredicted RBP16.93■□□□□ 0.3
TRIM41-206ENST00000514219 RNF225M0QZC1 329 aaPredicted RBP16.92■□□□□ 0.3
TRIM41-206ENST00000514219 DCXO43602 365 aa16.92■□□□□ 0.3
TRIM41-206ENST00000514219 URODP06132 367 aa16.92■□□□□ 0.3
TRIM41-206ENST00000514219 RB1P06400 928 aa16.92■□□□□ 0.3
TRIM41-206ENST00000514219 SETSIPP0DME0 302 aa16.92■□□□□ 0.3
TRIM41-206ENST00000514219 CLCN1P35523 988 aa16.92■□□□□ 0.3
TRIM41-206ENST00000514219 NSFP46459 744 aaKnown RBP16.92■□□□□ 0.3
TRIM41-206ENST00000514219 RAD23BP54727 409 aa16.92■□□□□ 0.3
TRIM41-206ENST00000514219 UBE3AQ05086 875 aa16.92■□□□□ 0.3
TRIM41-206ENST00000514219 WSCD1Q658N2 575 aa16.92■□□□□ 0.3
TRIM41-206ENST00000514219 SLC47A2Q86VL8 602 aa16.92■□□□□ 0.3
TRIM41-206ENST00000514219 B3GALNT2Q8NCR0 500 aa16.92■□□□□ 0.3
TRIM41-206ENST00000514219 C3orf58Q8NDZ4 430 aa16.92■□□□□ 0.3
TRIM41-206ENST00000514219 C2orf15Q8WU43 125 aaKnown RBP16.92■□□□□ 0.3
TRIM41-206ENST00000514219 SYT15Q9BQS2 421 aa16.92■□□□□ 0.3
TRIM41-206ENST00000514219 LHX5Q9H2C1 402 aa16.92■□□□□ 0.3
TRIM41-206ENST00000514219 NOCTQ9UK39 431 aaKnown RBP16.92■□□□□ 0.3
TRIM41-206ENST00000514219 AJAP1Q9UKB5 411 aaPredicted RBP16.92■□□□□ 0.3
TRIM41-206ENST00000514219 LZTS1Q9Y250 596 aa16.92■□□□□ 0.3
TRIM41-206ENST00000514219 ZKSCAN5Q9Y2L8 839 aa16.92■□□□□ 0.3
TRIM41-206ENST00000514219 MRPL42Q9Y6G3 142 aaKnown RBP16.92■□□□□ 0.3
TRIM41-206ENST00000514219 GRXCR2A6NFK2 248 aa16.91■□□□□ 0.3
TRIM41-206ENST00000514219 RBAK-RBAKDNI3L0D1 243 aa16.91■□□□□ 0.3
TRIM41-206ENST00000514219 LCA5LO95447 670 aa16.91■□□□□ 0.3
TRIM41-206ENST00000514219 MYBL1P10243 752 aa16.91■□□□□ 0.3
TRIM41-206ENST00000514219 FGFR3P22607 806 aa16.91■□□□□ 0.3
TRIM41-206ENST00000514219 RAP1GAPP47736 663 aa16.91■□□□□ 0.3
TRIM41-206ENST00000514219 GATMP50440 423 aa16.91■□□□□ 0.3
TRIM41-206ENST00000514219 BCAT1P54687 386 aa16.91■□□□□ 0.3
TRIM41-206ENST00000514219 CDH8P55286 799 aa16.91■□□□□ 0.3
TRIM41-206ENST00000514219 CNGA2Q16280 664 aa16.91■□□□□ 0.3
TRIM41-206ENST00000514219 IFI16Q16666 785 aaKnown RBP16.91■□□□□ 0.3
TRIM41-206ENST00000514219 FAM171A1Q5VUB5 890 aa16.91■□□□□ 0.3
TRIM41-206ENST00000514219 ARHGAP17Q68EM7 881 aa16.91■□□□□ 0.3
TRIM41-206ENST00000514219 TMCO2Q7Z6W1 182 aaPredicted RBP16.91■□□□□ 0.3
TRIM41-206ENST00000514219 KIAA1328Q86T90 577 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms