RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 PHKBQ93100 1093 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 TMEM47Q9BQJ4 181 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 ELOVL4Q9GZR5 314 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 PABPC3Q9H361 631 aaKnown RBP5.16□□□□□ -1.58
PTPN13-209ENST00000511467 ZNF180Q9UJW8 692 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 MAN1B1Q9UKM7 699 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 NRCAMQ92823 1304 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 F8W031 263 aaPredicted RBP5.16□□□□□ -1.58
PTPN13-209ENST00000511467 STAT5BP51692 787 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 HIRAP54198 1017 aaPredicted RBP5.16□□□□□ -1.58
PTPN13-209ENST00000511467 DRG2P55039 364 aaKnown RBP5.16□□□□□ -1.58
PTPN13-209ENST00000511467 KPNB1Q14974 876 aaKnown RBP5.16□□□□□ -1.58
PTPN13-209ENST00000511467 FAM83EQ2M2I3 478 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 CCDC153Q494R4 210 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 GPR158Q5T848 1215 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 DARS2Q6PI48 645 aaKnown RBP5.16□□□□□ -1.58
PTPN13-209ENST00000511467 UNC93AQ86WB7 457 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 AGR3Q8TD06 166 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 MAGED4Q96JG8 741 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 OLFM1Q99784 485 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 LXNQ9BS40 222 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 GOLPH3Q9H4A6 298 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 BCS1LQ9Y276 419 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 SQORQ9Y6N5 450 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 SCN5AQ14524 2016 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 ZNF318Q5VUA4 2279 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 CYP3A7-CYP3A51PA0A087WV96 503 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 FAM237AA0A1B0GTK4 181 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 C2orf81A6NN90 581 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 CRTAMO95727 393 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 COL6A1P12109 1028 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 CYP3A7P24462 503 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 GTF2A1P52655 376 aaPredicted RBP5.16□□□□□ -1.58
PTPN13-209ENST00000511467 ZNF33AQ06730 810 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 DIXDC1Q155Q3 683 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 ZSWIM7Q19AV6 140 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 INAVAQ3KP66 663 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 DEPDC1BQ8WUY9 529 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 SAMD11Q96NU1 681 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 TRIM9Q9C026 710 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 TBC1D13Q9NVG8 400 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 FETUBQ9UGM5 382 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 GTF3C4Q9UKN8 822 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 CDV3Q9UKY7 258 aaKnown RBP5.16□□□□□ -1.58
PTPN13-209ENST00000511467 SHOC2Q9UQ13 582 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 ITM2BQ9Y287 266 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 PCDHA5Q9Y5H7 936 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 MYO7BQ6PIF6 2116 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 UBA6A0AVT1 1052 aaPredicted RBP5.16□□□□□ -1.58
PTPN13-209ENST00000511467 POTEMA6NI47 508 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 ENO4A6NNW6 628 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 DPYSL4O14531 572 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 OPHN1O60890 802 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 MED24O75448 989 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 DDX6P26196 483 aaKnown RBP eCLIP5.16□□□□□ -1.58
PTPN13-209ENST00000511467 GRK3P35626 688 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 AGAP9Q5VTM2 703 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 BTBD8Q5XKL5 378 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 POTEHQ6S545 545 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 POTEGQ6S5H5 508 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 RAPH1Q70E73 1250 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 ZNF438Q7Z4V0 828 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 SNX32Q86XE0 403 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 YAF2Q8IY57 180 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 DNAJB8Q8NHS0 232 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 ATL1Q8WXF7 558 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 SPATA33Q96N06 139 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 EIF2AK1Q9BQI3 630 aaKnown RBP5.16□□□□□ -1.58
PTPN13-209ENST00000511467 MXRA8Q9BRK3 442 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 CACNA2D2Q9NY47 1150 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 AKAP7Q9P0M2 348 aaPredicted RBP5.16□□□□□ -1.58
PTPN13-209ENST00000511467 ATG2BQ96BY7 2078 aa5.15□□□□□ -1.58
PTPN13-209ENST00000511467 PFDN1O60925 122 aa5.15□□□□□ -1.58
PTPN13-209ENST00000511467 RPS6KA5O75582 802 aa5.15□□□□□ -1.58
PTPN13-209ENST00000511467 CXCR2P25025 360 aa5.15□□□□□ -1.58
PTPN13-209ENST00000511467 RAB15P59190 212 aa5.15□□□□□ -1.58
PTPN13-209ENST00000511467 FOXO4P98177 505 aa5.15□□□□□ -1.58
PTPN13-209ENST00000511467 FLOT2Q14254 428 aa5.15□□□□□ -1.58
PTPN13-209ENST00000511467 RFTN2Q52LD8 501 aaPredicted RBP5.15□□□□□ -1.58
PTPN13-209ENST00000511467 DAB2IPQ5VWQ8 1189 aa5.15□□□□□ -1.58
PTPN13-209ENST00000511467 MRNIPQ6NTE8 343 aa5.15□□□□□ -1.58
PTPN13-209ENST00000511467 CC2D1AQ6P1N0 951 aaPredicted RBP5.15□□□□□ -1.58
PTPN13-209ENST00000511467 LVRNQ6Q4G3 990 aa5.15□□□□□ -1.58
PTPN13-209ENST00000511467 SYT10Q6XYQ8 523 aa5.15□□□□□ -1.58
PTPN13-209ENST00000511467 LCORLQ8N3X6 602 aa5.15□□□□□ -1.58
PTPN13-209ENST00000511467 OSBPL9Q96SU4 736 aa5.15□□□□□ -1.58
PTPN13-209ENST00000511467 FAM207AQ9NSI2 230 aaPredicted RBP5.15□□□□□ -1.58
PTPN13-209ENST00000511467 ANKFY1Q9P2R3 1169 aa5.15□□□□□ -1.58
PTPN13-209ENST00000511467 AMACRQ9UHK6 382 aa5.15□□□□□ -1.58
PTPN13-209ENST00000511467 SOX13Q9UN79 622 aa5.15□□□□□ -1.58
PTPN13-209ENST00000511467 TNPO3Q9Y5L0 923 aaKnown RBP5.15□□□□□ -1.58
PTPN13-209ENST00000511467 MYOFQ9NZM1 2061 aa5.15□□□□□ -1.58
PTPN13-209ENST00000511467 CYP27B1O15528 508 aa5.15□□□□□ -1.58
PTPN13-209ENST00000511467 CTIFO43310 598 aaKnown RBP5.15□□□□□ -1.58
PTPN13-209ENST00000511467 GSPT1P15170 499 aaKnown RBP5.15□□□□□ -1.58
PTPN13-209ENST00000511467 PTX3P26022 381 aaPredicted RBP5.15□□□□□ -1.58
PTPN13-209ENST00000511467 TPP2P29144 1249 aaPredicted RBP5.15□□□□□ -1.58
PTPN13-209ENST00000511467 EPHB1P54762 984 aa5.15□□□□□ -1.58
PTPN13-209ENST00000511467 POLR2FP61218 127 aaKnown RBP5.15□□□□□ -1.58
PTPN13-209ENST00000511467 KRT33BQ14525 404 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms