RNA–Protein interactions for RNA: ENST00000510195.1

SNF8-208, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-208ENST00000510195 FAM126AQ9BYI3 521 aaPredicted RBP28.64■■■□□ 2.18
SNF8-208ENST00000510195 CHRDQ9H2X0 955 aa28.64■■■□□ 2.18
SNF8-208ENST00000510195 SNX9Q9Y5X1 595 aa28.64■■■□□ 2.18
SNF8-208ENST00000510195 TICRRQ7Z2Z1 1910 aa28.64■■■□□ 2.18
SNF8-208ENST00000510195 TNNC2P02585 160 aa28.63■■■□□ 2.17
SNF8-208ENST00000510195 CSH1P0DML2 217 aa28.63■■■□□ 2.17
SNF8-208ENST00000510195 CSH2P0DML3 217 aa28.63■■■□□ 2.17
SNF8-208ENST00000510195 DDX6P26196 483 aaKnown RBP eCLIP28.63■■■□□ 2.173e-6■□□□□ 10
SNF8-208ENST00000510195 PCSK1P29120 753 aa28.63■■■□□ 2.17
SNF8-208ENST00000510195 PLCB2Q00722 1185 aa28.63■■■□□ 2.17
SNF8-208ENST00000510195 EHHADHQ08426 723 aa28.63■■■□□ 2.17
SNF8-208ENST00000510195 CBWD2Q8IUF1 395 aa28.63■■■□□ 2.17
SNF8-208ENST00000510195 WDR49Q8IV35 697 aa28.63■■■□□ 2.17
SNF8-208ENST00000510195 GIPC2Q8TF65 315 aa28.63■■■□□ 2.17
SNF8-208ENST00000510195 NELL1Q92832 810 aa28.63■■■□□ 2.17
SNF8-208ENST00000510195 PRMT8Q9NR22 394 aaPredicted RBP28.63■■■□□ 2.17
SNF8-208ENST00000510195 TMLHEQ9NVH6 421 aa28.63■■■□□ 2.17
SNF8-208ENST00000510195 CGNQ9P2M7 1197 aaKnown RBP28.63■■■□□ 2.17
SNF8-208ENST00000510195 NDRG2Q9UN36 371 aaKnown RBP28.63■■■□□ 2.17
SNF8-208ENST00000510195 PCDHA7Q9UN72 937 aa28.63■■■□□ 2.17
SNF8-208ENST00000510195 PVALEFA0A1B0GWK0 134 aa28.62■■■□□ 2.17
SNF8-208ENST00000510195 KINO60870 393 aaKnown RBP28.62■■■□□ 2.17
SNF8-208ENST00000510195 PRPF40AO75400 957 aaKnown RBP28.62■■■□□ 2.17
SNF8-208ENST00000510195 ME1P48163 572 aa28.62■■■□□ 2.17
SNF8-208ENST00000510195 RPL10AP62906 217 aaKnown RBP28.62■■■□□ 2.17
SNF8-208ENST00000510195 CSTF1Q05048 431 aaKnown RBP28.62■■■□□ 2.17
SNF8-208ENST00000510195 FOXD4L5Q5VV16 416 aaPredicted RBP28.62■■■□□ 2.17
SNF8-208ENST00000510195 RESP18Q5W5W9 173 aa28.62■■■□□ 2.17
SNF8-208ENST00000510195 LIMS2Q7Z4I7 341 aa28.62■■■□□ 2.17
SNF8-208ENST00000510195 FOXD4L4Q8WXT5 416 aaPredicted RBP28.62■■■□□ 2.17
SNF8-208ENST00000510195 FUBP3Q96I24 572 aaKnown RBP eCLIP28.62■■■□□ 2.17
SNF8-208ENST00000510195 PKMYT1Q99640 499 aa28.62■■■□□ 2.17
SNF8-208ENST00000510195 HMGA1P17096 107 aaKnown RBP28.61■■■□□ 2.17
SNF8-208ENST00000510195 MTAPQ13126 283 aa28.61■■■□□ 2.17
SNF8-208ENST00000510195 PPP2R5DQ14738 602 aa28.61■■■□□ 2.17
SNF8-208ENST00000510195 CFAP221Q4G0U5 840 aa28.61■■■□□ 2.17
SNF8-208ENST00000510195 ADGRF2Q8IZF7 708 aa28.61■■■□□ 2.17
SNF8-208ENST00000510195 CMTM8Q8IZV2 173 aa28.61■■■□□ 2.17
SNF8-208ENST00000510195 CELF5Q8N6W0 485 aaKnown RBP28.61■■■□□ 2.17
SNF8-208ENST00000510195 ZBTB44Q8NCP5 570 aa28.61■■■□□ 2.17
SNF8-208ENST00000510195 BPIFB1Q8TDL5 484 aa28.61■■■□□ 2.17
SNF8-208ENST00000510195 HPDLQ96IR7 371 aa28.61■■■□□ 2.17
SNF8-208ENST00000510195 PI4K2AQ9BTU6 479 aa28.61■■■□□ 2.17
SNF8-208ENST00000510195 SLC46A2Q9BY10 475 aa28.61■■■□□ 2.17
SNF8-208ENST00000510195 AGPAT3Q9NRZ7 376 aa28.61■■■□□ 2.17
SNF8-208ENST00000510195 THG1LQ9NWX6 298 aaKnown RBP28.61■■■□□ 2.17
SNF8-208ENST00000510195 ZSCAN32Q9NX65 697 aa28.61■■■□□ 2.17
SNF8-208ENST00000510195 UXTQ9UBK9 157 aaPredicted RBP28.61■■■□□ 2.17
SNF8-208ENST00000510195 TGFB1I1O43294 461 aa28.6■■■□□ 2.17
SNF8-208ENST00000510195 F11P03951 625 aa28.6■■■□□ 2.17
SNF8-208ENST00000510195 CCNE1P24864 410 aa28.6■■■□□ 2.17
SNF8-208ENST00000510195 NLRP12P59046 1061 aa28.6■■■□□ 2.17
SNF8-208ENST00000510195 CYP4F8P98187 520 aa28.6■■■□□ 2.17
SNF8-208ENST00000510195 SNRNP35Q16560 246 aaKnown RBP28.6■■■□□ 2.17
SNF8-208ENST00000510195 SOWAHAQ2M3V2 549 aa28.6■■■□□ 2.17
SNF8-208ENST00000510195 HS2ST1Q7LGA3 356 aa28.6■■■□□ 2.17
SNF8-208ENST00000510195 RALGPS2Q86X27 583 aaPredicted RBP28.6■■■□□ 2.17
SNF8-208ENST00000510195 OR5B17Q8NGF7 314 aa28.6■■■□□ 2.17
SNF8-208ENST00000510195 ATRIPQ8WXE1 791 aa28.6■■■□□ 2.17
SNF8-208ENST00000510195 LRRC3BQ96PB8 259 aa28.6■■■□□ 2.17
SNF8-208ENST00000510195 LMAN1LQ9HAT1 526 aa28.6■■■□□ 2.17
SNF8-208ENST00000510195 RCOR1Q9UKL0 485 aa28.6■■■□□ 2.17
SNF8-208ENST00000510195 MYBPHLA2RUH7 354 aa28.59■■■□□ 2.17
SNF8-208ENST00000510195 KPNA1P52294 538 aaPredicted RBP28.59■■■□□ 2.17
SNF8-208ENST00000510195 LMBRD2Q68DH5 695 aaPredicted RBP28.59■■■□□ 2.17
SNF8-208ENST00000510195 SCARA3Q6AZY7 606 aa28.59■■■□□ 2.17
SNF8-208ENST00000510195 TMEM150AQ86TG1 271 aa28.59■■■□□ 2.17
SNF8-208ENST00000510195 SCFD1Q8WVM8 642 aa28.59■■■□□ 2.17
SNF8-208ENST00000510195 TRMT2BQ96GJ1 504 aaKnown RBP28.59■■■□□ 2.17
SNF8-208ENST00000510195 GTF3C4Q9UKN8 822 aa28.59■■■□□ 2.17
SNF8-208ENST00000510195 OTOGLQ3ZCN5 2332 aa28.59■■■□□ 2.17
SNF8-208ENST00000510195 PRAMEF12O95522 483 aa28.58■■■□□ 2.17
SNF8-208ENST00000510195 FAM163BP0C2L3 166 aa28.58■■■□□ 2.17
SNF8-208ENST00000510195 CHRNB1P11230 501 aa28.58■■■□□ 2.17
SNF8-208ENST00000510195 AVPR1AP37288 418 aa28.58■■■□□ 2.17
SNF8-208ENST00000510195 CDR1P51861 262 aa28.58■■■□□ 2.17
SNF8-208ENST00000510195 NRLP54845 237 aa28.58■■■□□ 2.17
SNF8-208ENST00000510195 LRRC32Q14392 662 aa28.58■■■□□ 2.17
SNF8-208ENST00000510195 BMT2Q1RMZ1 405 aa28.58■■■□□ 2.17
SNF8-208ENST00000510195 FOXD4L6Q3SYB3 417 aaPredicted RBP28.58■■■□□ 2.17
SNF8-208ENST00000510195 FAM171BQ6P995 826 aa28.58■■■□□ 2.17
SNF8-208ENST00000510195 FOXD4L3Q6VB84 417 aaPredicted RBP28.58■■■□□ 2.17
SNF8-208ENST00000510195 SPATA2LQ8IUW3 424 aaPredicted RBP28.58■■■□□ 2.17
SNF8-208ENST00000510195 C12orf56Q8IXR9 622 aa28.58■■■□□ 2.17
SNF8-208ENST00000510195 XXYLT1Q8NBI6 393 aa28.58■■■□□ 2.17
SNF8-208ENST00000510195 SUMF1Q8NBK3 374 aa28.58■■■□□ 2.17
SNF8-208ENST00000510195 MYRFLQ96LU7 910 aa28.58■■■□□ 2.17
SNF8-208ENST00000510195 FNBP1Q96RU3 617 aa28.58■■■□□ 2.17
SNF8-208ENST00000510195 KIF9Q9HAQ2 790 aa28.58■■■□□ 2.17
SNF8-208ENST00000510195 DENND4CQ5VZ89 1909 aa28.58■■■□□ 2.17
SNF8-208ENST00000510195 PTPRJQ12913 1337 aa28.58■■■□□ 2.17
SNF8-208ENST00000510195 ACAT1P24752 427 aaKnown RBP28.57■■■□□ 2.16
SNF8-208ENST00000510195 PSMD6Q15008 389 aa28.57■■■□□ 2.16
SNF8-208ENST00000510195 MAPRE1Q15691 268 aaKnown RBP28.57■■■□□ 2.16
SNF8-208ENST00000510195 C4orf50Q6ZRC1 276 aa28.57■■■□□ 2.16
SNF8-208ENST00000510195 TRAPPC11Q7Z392 1133 aa28.57■■■□□ 2.16
SNF8-208ENST00000510195 OSTM1Q86WC4 334 aa28.57■■■□□ 2.16
SNF8-208ENST00000510195 RUBCNQ92622 972 aa28.57■■■□□ 2.16
SNF8-208ENST00000510195 MRPS31Q92665 395 aaKnown RBP28.57■■■□□ 2.16
SNF8-208ENST00000510195 FAM84AQ96KN4 292 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms