RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 PI4K2AQ9BTU6 479 aa19.26■□□□□ 0.67
TPM3-220ENST00000509601 LTB4R2Q9NPC1 389 aa19.26■□□□□ 0.67
TPM3-220ENST00000509601 TRPV5Q9NQA5 729 aa19.26■□□□□ 0.67
TPM3-220ENST00000509601 CGNQ9P2M7 1197 aaKnown RBP19.26■□□□□ 0.67
TPM3-220ENST00000509601 GTF3C4Q9UKN8 822 aa19.26■□□□□ 0.67
TPM3-220ENST00000509601 MYBPHLA2RUH7 354 aa19.25■□□□□ 0.67
TPM3-220ENST00000509601 PRPF40AO75400 957 aaKnown RBP19.25■□□□□ 0.67
TPM3-220ENST00000509601 DLATP10515 647 aaKnown RBP19.25■□□□□ 0.67
TPM3-220ENST00000509601 LMO2P25791 158 aa19.25■□□□□ 0.67
TPM3-220ENST00000509601 MYL7Q01449 175 aa19.25■□□□□ 0.67
TPM3-220ENST00000509601 MYO1EQ12965 1108 aa19.25■□□□□ 0.67
TPM3-220ENST00000509601 PSMD2Q13200 908 aa19.25■□□□□ 0.67
TPM3-220ENST00000509601 FAM171BQ6P995 826 aa19.25■□□□□ 0.67
TPM3-220ENST00000509601 TPRG1Q6ZUI0 275 aa19.25■□□□□ 0.67
TPM3-220ENST00000509601 HS2ST1Q7LGA3 356 aa19.25■□□□□ 0.67
TPM3-220ENST00000509601 TMEM150AQ86TG1 271 aa19.25■□□□□ 0.67
TPM3-220ENST00000509601 ADGRF2Q8IZF7 708 aa19.25■□□□□ 0.67
TPM3-220ENST00000509601 ZNF687Q8N1G0 1237 aa19.25■□□□□ 0.67
TPM3-220ENST00000509601 PLEKHO2Q8TD55 490 aa19.25■□□□□ 0.67
TPM3-220ENST00000509601 DEPDC1BQ8WUY9 529 aa19.25■□□□□ 0.67
TPM3-220ENST00000509601 IRF7Q92985 503 aa19.25■□□□□ 0.67
TPM3-220ENST00000509601 E2F7Q96AV8 911 aa19.25■□□□□ 0.67
TPM3-220ENST00000509601 CCDC127Q96BQ5 260 aa19.25■□□□□ 0.67
TPM3-220ENST00000509601 SLITRK6Q9H5Y7 841 aa19.25■□□□□ 0.67
TPM3-220ENST00000509601 DMAC2Q9NW81 257 aa19.25■□□□□ 0.67
TPM3-220ENST00000509601 USP25Q9UHP3 1055 aa19.25■□□□□ 0.67
TPM3-220ENST00000509601 ARNTLO00327 626 aa19.24■□□□□ 0.67
TPM3-220ENST00000509601 ATP2C2O75185 946 aa19.24■□□□□ 0.67
TPM3-220ENST00000509601 FGF19O95750 216 aa19.24■□□□□ 0.67
TPM3-220ENST00000509601 F11P03951 625 aa19.24■□□□□ 0.67
TPM3-220ENST00000509601 TNNI1P19237 187 aa19.24■□□□□ 0.67
TPM3-220ENST00000509601 CYP2F1P24903 491 aa19.24■□□□□ 0.67
TPM3-220ENST00000509601 TARSP26639 723 aaKnown RBP19.24■□□□□ 0.67
TPM3-220ENST00000509601 WEE1P30291 646 aa19.24■□□□□ 0.67
TPM3-220ENST00000509601 NDUFA8P51970 172 aa19.24■□□□□ 0.67
TPM3-220ENST00000509601 CYP4F8P98187 520 aa19.24■□□□□ 0.67
TPM3-220ENST00000509601 UBXN2BQ14CS0 331 aa19.24■□□□□ 0.67
TPM3-220ENST00000509601 VEPH1Q14D04 833 aa19.24■□□□□ 0.67
TPM3-220ENST00000509601 DDR2Q16832 855 aa19.24■□□□□ 0.67
TPM3-220ENST00000509601 GPR158Q5T848 1215 aa19.24■□□□□ 0.67
TPM3-220ENST00000509601 SDHAF4Q5VUM1 108 aa19.24■□□□□ 0.67
TPM3-220ENST00000509601 FRMD5Q7Z6J6 570 aa19.24■□□□□ 0.67
TPM3-220ENST00000509601 C1orf210Q8IVY1 113 aa19.24■□□□□ 0.67
TPM3-220ENST00000509601 MAML2Q8IZL2 1156 aaPredicted RBP19.24■□□□□ 0.67
TPM3-220ENST00000509601 TMEM174Q8WUU8 243 aa19.24■□□□□ 0.67
TPM3-220ENST00000509601 CLDN23Q96B33 292 aa19.24■□□□□ 0.67
TPM3-220ENST00000509601 NELL2Q99435 816 aa19.24■□□□□ 0.67
TPM3-220ENST00000509601 CGRRF1Q99675 332 aa19.24■□□□□ 0.67
TPM3-220ENST00000509601 SLC46A2Q9BY10 475 aa19.24■□□□□ 0.67
TPM3-220ENST00000509601 TASP1Q9H6P5 420 aa19.24■□□□□ 0.67
TPM3-220ENST00000509601 NME7Q9Y5B8 376 aa19.24■□□□□ 0.67
TPM3-220ENST00000509601 ZNF263O14978 683 aa19.23■□□□□ 0.67
TPM3-220ENST00000509601 FCHO2Q0JRZ9 810 aa19.23■□□□□ 0.67
TPM3-220ENST00000509601 ZNF852Q6ZMS4 543 aa19.23■□□□□ 0.67
TPM3-220ENST00000509601 ASCL5Q7RTU5 278 aa19.23■□□□□ 0.67
TPM3-220ENST00000509601 STKLD1Q8NE28 680 aa19.23■□□□□ 0.67
TPM3-220ENST00000509601 FNBP1Q96RU3 617 aa19.23■□□□□ 0.67
TPM3-220ENST00000509601 KCTD10Q9H3F6 313 aa19.23■□□□□ 0.67
TPM3-220ENST00000509601 ABCB6Q9NP58 842 aa19.23■□□□□ 0.67
TPM3-220ENST00000509601 R3HCC1Q9Y3T6 440 aaKnown RBP19.23■□□□□ 0.67
TPM3-220ENST00000509601 A0A1W2PQ27 194 aa19.22■□□□□ 0.67
TPM3-220ENST00000509601 A0A1W2PQ64 194 aa19.22■□□□□ 0.67
TPM3-220ENST00000509601 A0A1W2PQD8 194 aa19.22■□□□□ 0.67
TPM3-220ENST00000509601 CHADO15335 359 aa19.22■□□□□ 0.67
TPM3-220ENST00000509601 GFRA3O60609 400 aa19.22■□□□□ 0.67
TPM3-220ENST00000509601 EXOC3O60645 756 aa19.22■□□□□ 0.67
TPM3-220ENST00000509601 MYL1P05976 194 aa19.22■□□□□ 0.67
TPM3-220ENST00000509601 FAM163BP0C2L3 166 aa19.22■□□□□ 0.67
TPM3-220ENST00000509601 WARSP23381 471 aaKnown RBP19.22■□□□□ 0.67
TPM3-220ENST00000509601 PCSK1P29120 753 aa19.22■□□□□ 0.67
TPM3-220ENST00000509601 CDC25CP30307 473 aa19.22■□□□□ 0.67
TPM3-220ENST00000509601 SYKP43405 635 aa19.22■□□□□ 0.67
TPM3-220ENST00000509601 CASP4P49662 377 aa19.22■□□□□ 0.67
TPM3-220ENST00000509601 NLRP12P59046 1061 aa19.22■□□□□ 0.67
TPM3-220ENST00000509601 TAF12Q16514 161 aa19.22■□□□□ 0.67
TPM3-220ENST00000509601 ARHGAP15Q53QZ3 475 aa19.22■□□□□ 0.67
TPM3-220ENST00000509601 MRPL45Q9BRJ2 306 aaKnown RBP19.22■□□□□ 0.67
TPM3-220ENST00000509601 SCAND2PQ9GZW5 306 aaPredicted RBP19.22■□□□□ 0.67
TPM3-220ENST00000509601 CRTAC1Q9NQ79 661 aa19.22■□□□□ 0.67
TPM3-220ENST00000509601 EXOC1Q9NV70 894 aa19.22■□□□□ 0.67
TPM3-220ENST00000509601 PDGFRBP09619 1106 aa19.21■□□□□ 0.67
TPM3-220ENST00000509601 PRR29P0C7W0 189 aa19.21■□□□□ 0.67
TPM3-220ENST00000509601 CLDN10P78369 228 aa19.21■□□□□ 0.67
TPM3-220ENST00000509601 CFAP221Q4G0U5 840 aa19.21■□□□□ 0.67
TPM3-220ENST00000509601 SLC9A9Q8IVB4 645 aa19.21■□□□□ 0.67
TPM3-220ENST00000509601 GOLGA5Q8TBA6 731 aa19.21■□□□□ 0.67
TPM3-220ENST00000509601 PARD3BQ8TEW8 1205 aa19.21■□□□□ 0.67
TPM3-220ENST00000509601 BCO2Q9BYV7 579 aa19.21■□□□□ 0.67
TPM3-220ENST00000509601 GOLPH3LQ9H4A5 285 aa19.21■□□□□ 0.67
TPM3-220ENST00000509601 OBP2AQ9NY56 170 aa19.21■□□□□ 0.67
TPM3-220ENST00000509601 CDH9Q9ULB4 789 aa19.21■□□□□ 0.67
TPM3-220ENST00000509601 FAM186AA6NE01 2351 aa19.2■□□□□ 0.66
TPM3-220ENST00000509601 MIA3Q5JRA6 1907 aa19.2■□□□□ 0.66
TPM3-220ENST00000509601 PRR23AA6NEV1 266 aa19.2■□□□□ 0.66
TPM3-220ENST00000509601 MAN2B1O00754 1011 aa19.2■□□□□ 0.66
TPM3-220ENST00000509601 PDXKO00764 312 aa19.2■□□□□ 0.66
TPM3-220ENST00000509601 TACC1O75410 805 aa19.2■□□□□ 0.66
TPM3-220ENST00000509601 NOL4O94818 638 aa19.2■□□□□ 0.66
TPM3-220ENST00000509601 PRAMEF12O95522 483 aa19.2■□□□□ 0.66
TPM3-220ENST00000509601 STAU1O95793 577 aaKnown RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms