RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 MDH1BQ5I0G3 518 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 COLEC12Q5KU26 742 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 SLC27A1Q6PCB7 646 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 MPZL3Q6UWV2 235 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 SH3RF1Q7Z6J0 888 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 PPM1KQ8N3J5 372 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 NAT16Q8N8M0 369 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 DNAAF3Q8N9W5 541 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 KREMEN2Q8NCW0 462 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 TEKT4Q8WW24 435 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 SPON2Q9BUD6 331 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.11□□□□□ -1.91
NEDD4-208ENST00000508342 NKIRAS1Q9NYS0 192 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 TEKT2Q9UIF3 430 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 FBXO10Q9UK96 956 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 SPEF1Q9Y4P9 236 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 ASXL3Q9C0F0 2248 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 TMEM221A6NGB7 291 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 M0R296 226 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 AXIN1O15169 862 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 NVLO15381 856 aaKnown RBP3.11□□□□□ -1.91
NEDD4-208ENST00000508342 MGEA5O60502 916 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 PRMT3O60678 531 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 ITGB3P05106 788 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 FOSL1P15407 271 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 ATP5DP30049 168 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 NOS2P35228 1153 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 STAT1P42224 750 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 SCNN1GP51170 649 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 ZNF132P52740 706 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 UBE3AQ05086 875 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 PTK2Q05397 1052 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 ZNF852Q6ZMS4 543 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 CACUL1Q86Y37 369 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 CDC26Q8NHZ8 85 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 MAIP1Q8WWC4 291 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 RAD54LQ92698 747 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 HAUS8Q9BT25 410 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 TTPALQ9BTX7 342 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 KIFC3Q9BVG8 833 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 BACH2Q9BYV9 841 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 CIPCQ9C0C6 399 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 LSG1Q9H089 658 aaKnown RBP3.11□□□□□ -1.91
NEDD4-208ENST00000508342 NEUROD4Q9HD90 331 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 MYO1AQ9UBC5 1043 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 MUTYHQ9UIF7 546 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 INVSQ9Y283 1065 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 PCDHA2Q9Y5H9 948 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 ZNF318Q5VUA4 2279 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 M0QYV0 167 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 DFFAO00273 331 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 CUTAO60888 179 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 SNAI1O95863 264 aaPredicted RBP3.11□□□□□ -1.91
NEDD4-208ENST00000508342 RPN1P04843 607 aaKnown RBP3.11□□□□□ -1.91
NEDD4-208ENST00000508342 ZNF865P0CJ78 1059 aaPredicted RBP3.11□□□□□ -1.91
NEDD4-208ENST00000508342 TIE1P35590 1138 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 FLT3P36888 993 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 SLC11A2P49281 568 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 TUFMP49411 452 aaKnown RBP3.11□□□□□ -1.91
NEDD4-208ENST00000508342 GNG11P61952 73 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 FAM160A1Q05DH4 1040 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 CUL1Q13616 776 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 SIM2Q14190 667 aaPredicted RBP3.11□□□□□ -1.91
NEDD4-208ENST00000508342 PKN1Q16512 942 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 GOLGA7BQ2TAP0 167 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 OR6B2Q6IFH4 312 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 UBE2Q1Q7Z7E8 422 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 PHLDB2Q86SQ0 1253 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 ZSCAN30Q86W11 494 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 KSR1Q8IVT5 923 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 GJD3Q8N144 294 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 ARL6IP6Q8N6S5 226 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 MCUQ8NE86 351 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 MRPL38Q96DV4 380 aaKnown RBP3.11□□□□□ -1.91
NEDD4-208ENST00000508342 SAAL1Q96ER3 474 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 CCDC51Q96ER9 411 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 FGD4Q96M96 766 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 SLC39A2Q9NP94 309 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 SCN9AQ15858 1988 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 A0A1W2PPC1 479 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 SYNDIG1LA6NDD5 238 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 POTEMA6NI47 508 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 A6NJY4 79 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 H3BM21 787 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 INPP4BO15327 924 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 TSPAN3O60637 253 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 ATP1A1P05023 1023 aaKnown RBP3.11□□□□□ -1.91
NEDD4-208ENST00000508342 DAB2P98082 770 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 ZNF211Q13398 564 aaPredicted RBP3.11□□□□□ -1.91
NEDD4-208ENST00000508342 MTX1Q13505 466 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.11□□□□□ -1.91
NEDD4-208ENST00000508342 C2orf27AQ580R0 203 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 KHDRBS2Q5VWX1 349 aaKnown RBP3.11□□□□□ -1.91
NEDD4-208ENST00000508342 GRAMD4Q6IC98 578 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 TPGS1Q6ZTW0 290 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 ANKS4BQ8N8V4 417 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 SLC7A14Q8TBB6 771 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 NELFBQ8WX92 580 aa3.11□□□□□ -1.91
NEDD4-208ENST00000508342 DACT3Q96B18 629 aaPredicted RBP3.11□□□□□ -1.91
NEDD4-208ENST00000508342 C12orf42Q96LP6 360 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms