RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 SMARCB1Q12824 385 aa15.33■□□□□ 0.05
RAB28-205ENST00000508274 DUOXA2Q1HG44 320 aa15.33■□□□□ 0.05
RAB28-205ENST00000508274 BMT2Q1RMZ1 405 aa15.33■□□□□ 0.05
RAB28-205ENST00000508274 WDR49Q8IV35 697 aa15.33■□□□□ 0.05
RAB28-205ENST00000508274 MFSD6LQ8IWD5 586 aa15.33■□□□□ 0.05
RAB28-205ENST00000508274 TMEM86AQ8N2M4 240 aa15.33■□□□□ 0.05
RAB28-205ENST00000508274 TOP6BLQ8N6T0 577 aa15.33■□□□□ 0.05
RAB28-205ENST00000508274 IRF7Q92985 503 aa15.33■□□□□ 0.05
RAB28-205ENST00000508274 PAGE5Q96GU1 130 aa15.33■□□□□ 0.05
RAB28-205ENST00000508274 HPDLQ96IR7 371 aa15.33■□□□□ 0.05
RAB28-205ENST00000508274 LRRC3BQ96PB8 259 aa15.33■□□□□ 0.05
RAB28-205ENST00000508274 ACBD6Q9BR61 282 aa15.33■□□□□ 0.05
RAB28-205ENST00000508274 KIAA1586Q9HCI6 787 aa15.33■□□□□ 0.05
RAB28-205ENST00000508274 GTF3C4Q9UKN8 822 aa15.33■□□□□ 0.05
RAB28-205ENST00000508274 GREB1Q4ZG55 1949 aa15.33■□□□□ 0.04
RAB28-205ENST00000508274 ARNTLO00327 626 aa15.32■□□□□ 0.04
RAB28-205ENST00000508274 GABRDO14764 452 aa15.32■□□□□ 0.04
RAB28-205ENST00000508274 PRPF40AO75400 957 aaKnown RBP15.32■□□□□ 0.04
RAB28-205ENST00000508274 HMGA1P17096 107 aaKnown RBP15.32■□□□□ 0.04
RAB28-205ENST00000508274 CYP2F1P24903 491 aa15.32■□□□□ 0.04
RAB28-205ENST00000508274 MYL7Q01449 175 aa15.32■□□□□ 0.04
RAB28-205ENST00000508274 STK4Q13043 487 aa15.32■□□□□ 0.04
RAB28-205ENST00000508274 PSMD6Q15008 389 aa15.32■□□□□ 0.04
RAB28-205ENST00000508274 SURF1Q15526 300 aa15.32■□□□□ 0.04
RAB28-205ENST00000508274 HS2ST1Q7LGA3 356 aa15.32■□□□□ 0.04
RAB28-205ENST00000508274 TRAPPC11Q7Z392 1133 aa15.32■□□□□ 0.04
RAB28-205ENST00000508274 TMEM150AQ86TG1 271 aa15.32■□□□□ 0.04
RAB28-205ENST00000508274 MAML2Q8IZL2 1156 aaPredicted RBP15.32■□□□□ 0.04
RAB28-205ENST00000508274 XXYLT1Q8NBI6 393 aa15.32■□□□□ 0.04
RAB28-205ENST00000508274 KIAA0895Q8NCT3 520 aa15.32■□□□□ 0.04
RAB28-205ENST00000508274 KBTBD7Q8WVZ9 684 aa15.32■□□□□ 0.04
RAB28-205ENST00000508274 CCDC127Q96BQ5 260 aa15.32■□□□□ 0.04
RAB28-205ENST00000508274 SPATA32Q96LK8 384 aa15.32■□□□□ 0.04
RAB28-205ENST00000508274 CGRRF1Q99675 332 aa15.32■□□□□ 0.04
RAB28-205ENST00000508274 BCO2Q9BYV7 579 aa15.32■□□□□ 0.04
RAB28-205ENST00000508274 SMG9Q9H0W8 520 aaKnown RBP15.32■□□□□ 0.04
RAB28-205ENST00000508274 GZF1Q9H116 711 aaPredicted RBP15.32■□□□□ 0.04
RAB28-205ENST00000508274 NDRG2Q9UN36 371 aaKnown RBP15.32■□□□□ 0.04
RAB28-205ENST00000508274 FAM186AA6NE01 2351 aa15.32■□□□□ 0.04
RAB28-205ENST00000508274 ZNF263O14978 683 aa15.32■□□□□ 0.04
RAB28-205ENST00000508274 ATP2C2O75185 946 aa15.32■□□□□ 0.04
RAB28-205ENST00000508274 FGF19O95750 216 aa15.32■□□□□ 0.04
RAB28-205ENST00000508274 CST3P01034 146 aaPredicted RBP15.32■□□□□ 0.04
RAB28-205ENST00000508274 TNNI1P19237 187 aa15.32■□□□□ 0.04
RAB28-205ENST00000508274 CMA1P23946 247 aa15.32■□□□□ 0.04
RAB28-205ENST00000508274 PSMC1P62191 440 aaKnown RBP15.32■□□□□ 0.04
RAB28-205ENST00000508274 KRT85P78386 507 aa15.32■□□□□ 0.04
RAB28-205ENST00000508274 MYO1EQ12965 1108 aa15.32■□□□□ 0.04
RAB28-205ENST00000508274 FZD5Q13467 585 aa15.32■□□□□ 0.04
RAB28-205ENST00000508274 TAF12Q16514 161 aa15.32■□□□□ 0.04
RAB28-205ENST00000508274 NFE2Q16621 373 aaPredicted RBP15.32■□□□□ 0.04
RAB28-205ENST00000508274 DDR2Q16832 855 aa15.32■□□□□ 0.04
RAB28-205ENST00000508274 KNOP1Q1ED39 458 aaKnown RBP15.32■□□□□ 0.04
RAB28-205ENST00000508274 KMT5BQ4FZB7 885 aa15.32■□□□□ 0.04
RAB28-205ENST00000508274 ARHGAP15Q53QZ3 475 aa15.32■□□□□ 0.04
RAB28-205ENST00000508274 ZNF852Q6ZMS4 543 aa15.32■□□□□ 0.04
RAB28-205ENST00000508274 NKD2Q969F2 451 aaPredicted RBP15.32■□□□□ 0.04
RAB28-205ENST00000508274 ZFYVE19Q96K21 471 aa15.32■□□□□ 0.04
RAB28-205ENST00000508274 FNBP1Q96RU3 617 aa15.32■□□□□ 0.04
RAB28-205ENST00000508274 OSBPL6Q9BZF3 934 aa15.32■□□□□ 0.04
RAB28-205ENST00000508274 SPATA6Q9NWH7 488 aaPredicted RBP15.32■□□□□ 0.04
RAB28-205ENST00000508274 MAGED2Q9UNF1 606 aaPredicted RBP15.32■□□□□ 0.04
RAB28-205ENST00000508274 HPSEQ9Y251 543 aa15.32■□□□□ 0.04
RAB28-205ENST00000508274 R3HCC1Q9Y3T6 440 aaKnown RBP15.32■□□□□ 0.04
RAB28-205ENST00000508274 PIAS3Q9Y6X2 628 aa15.32■□□□□ 0.04
RAB28-205ENST00000508274 R4GN57 208 aa15.32■□□□□ 0.04
RAB28-205ENST00000508274 ANAPC1Q9H1A4 1944 aa15.31■□□□□ 0.04
RAB28-205ENST00000508274 PTPRZ1P23471 2315 aaPredicted RBP15.31■□□□□ 0.04
RAB28-205ENST00000508274 MYBPHLA2RUH7 354 aa15.31■□□□□ 0.04
RAB28-205ENST00000508274 SP9P0CG40 484 aa15.31■□□□□ 0.04
RAB28-205ENST00000508274 LMO2P25791 158 aa15.31■□□□□ 0.04
RAB28-205ENST00000508274 CDC25CP30307 473 aa15.31■□□□□ 0.04
RAB28-205ENST00000508274 LHX1P48742 406 aa15.31■□□□□ 0.04
RAB28-205ENST00000508274 CASP4P49662 377 aa15.31■□□□□ 0.04
RAB28-205ENST00000508274 SNRPFP62306 86 aaKnown RBP15.31■□□□□ 0.04
RAB28-205ENST00000508274 FCHO2Q0JRZ9 810 aa15.31■□□□□ 0.04
RAB28-205ENST00000508274 LIMS2Q7Z4I7 341 aa15.31■□□□□ 0.04
RAB28-205ENST00000508274 C12orf56Q8IXR9 622 aa15.31■□□□□ 0.04
RAB28-205ENST00000508274 ZNF687Q8N1G0 1237 aa15.31■□□□□ 0.04
RAB28-205ENST00000508274 PLEKHO2Q8TD55 490 aa15.31■□□□□ 0.04
RAB28-205ENST00000508274 ZNF516Q92618 1163 aa15.31■□□□□ 0.04
RAB28-205ENST00000508274 GCNAQ96QF7 691 aa15.31■□□□□ 0.04
RAB28-205ENST00000508274 SLC46A2Q9BY10 475 aa15.31■□□□□ 0.04
RAB28-205ENST00000508274 TASP1Q9H6P5 420 aa15.31■□□□□ 0.04
RAB28-205ENST00000508274 TRPV5Q9NQA5 729 aa15.31■□□□□ 0.04
RAB28-205ENST00000508274 EXOC1Q9NV70 894 aa15.31■□□□□ 0.04
RAB28-205ENST00000508274 NME7Q9Y5B8 376 aa15.31■□□□□ 0.04
RAB28-205ENST00000508274 EXOC3O60645 756 aa15.3■□□□□ 0.04
RAB28-205ENST00000508274 TADA3O75528 432 aa15.3■□□□□ 0.04
RAB28-205ENST00000508274 F11P03951 625 aa15.3■□□□□ 0.04
RAB28-205ENST00000508274 PCSK1P29120 753 aa15.3■□□□□ 0.04
RAB28-205ENST00000508274 SOX9P48436 509 aa15.3■□□□□ 0.04
RAB28-205ENST00000508274 NDUFA8P51970 172 aa15.3■□□□□ 0.04
RAB28-205ENST00000508274 NLRP12P59046 1061 aa15.3■□□□□ 0.04
RAB28-205ENST00000508274 YAF2Q8IY57 180 aa15.3■□□□□ 0.04
RAB28-205ENST00000508274 SPATA18Q8TC71 538 aa15.3■□□□□ 0.04
RAB28-205ENST00000508274 FAM3CQ92520 227 aa15.3■□□□□ 0.04
RAB28-205ENST00000508274 E2F7Q96AV8 911 aa15.3■□□□□ 0.04
RAB28-205ENST00000508274 CLDN23Q96B33 292 aa15.3■□□□□ 0.04
RAB28-205ENST00000508274 MMS19Q96T76 1030 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms