RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 CUEDC2Q9H467 287 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 PLEKHA5Q9HAU0 1116 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 VPS45Q9NRW7 570 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 USP40Q9NVE5 1235 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 DTLQ9NZJ0 730 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 PGAP2Q9UHJ9 254 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 POLHQ9Y253 713 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 SPATA31D1Q6ZQQ2 1576 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 PITPNM2Q9BZ72 1349 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 C15orf38-AP3S2A0A0A6YYH1 394 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 C1orf232A0A0U1RR37 186 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 SMIM23A6NLE4 172 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 ST8SIA5O15466 376 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 FKBP6O75344 327 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 KRT5P13647 590 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 SYN1P17600 705 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 JAK1P23458 1154 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 MTHFRP42898 656 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 ARHGDIBP52566 201 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 LSM11P83369 360 aaKnown RBP eCLIP11.31□□□□□ -0.61e-7■■■■■ 32.8
PDLIM5-210ENST00000508216 KRT17Q04695 432 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 TRIM28Q13263 835 aaKnown RBP11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 DGKDQ16760 1214 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 GTF2IRD2BQ6EKJ0 949 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 BLOC1S2Q6QNY1 142 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 C15orf52Q6ZUT6 534 aaKnown RBP11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 ARPINQ7Z6K5 226 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 NOP9Q86U38 636 aaKnown RBP11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 GTF2IRD2Q86UP8 949 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 LINC00518Q8N0U6 118 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 CNTROBQ8N137 903 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 TSGA13Q96PP4 275 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 OR2B2Q9GZK3 357 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 MYLK2Q9H1R3 596 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 TMEM206Q9H813 350 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 SDHAF3Q9NRP4 125 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 FGFR1OP2Q9NVK5 253 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 PIH1D1Q9NWS0 290 aaKnown RBP11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 NDE1Q9NXR1 346 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 MRPL39Q9NYK5 338 aaKnown RBP11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 CACNG2Q9Y698 323 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 A0A1W2PQC6 194 aa11.3□□□□□ -0.6
PDLIM5-210ENST00000508216 SH2B2O14492 632 aaPredicted RBP11.3□□□□□ -0.6
PDLIM5-210ENST00000508216 MAGEB2O15479 319 aa11.3□□□□□ -0.6
PDLIM5-210ENST00000508216 PI15O43692 258 aa11.3□□□□□ -0.6
PDLIM5-210ENST00000508216 MAGEC1O60732 1142 aa11.3□□□□□ -0.6
PDLIM5-210ENST00000508216 RPS17P08708 135 aaKnown RBP11.3□□□□□ -0.6
PDLIM5-210ENST00000508216 ANPEPP15144 967 aa11.3□□□□□ -0.6
PDLIM5-210ENST00000508216 BMP6P22004 513 aa11.3□□□□□ -0.6
PDLIM5-210ENST00000508216 DNAJB2P25686 324 aa11.3□□□□□ -0.6
PDLIM5-210ENST00000508216 ALDH3B2P48448 385 aa11.3□□□□□ -0.6
PDLIM5-210ENST00000508216 IRX4P78413 519 aa11.3□□□□□ -0.6
PDLIM5-210ENST00000508216 LRRC63Q05C16 580 aa11.3□□□□□ -0.6
PDLIM5-210ENST00000508216 IDI1Q13907 227 aa11.3□□□□□ -0.6
PDLIM5-210ENST00000508216 SMU1Q2TAY7 513 aa11.3□□□□□ -0.6
PDLIM5-210ENST00000508216 C5orf22Q49AR2 442 aa11.3□□□□□ -0.6
PDLIM5-210ENST00000508216 NANOGP8Q6NSW7 305 aa11.3□□□□□ -0.6
PDLIM5-210ENST00000508216 PDXDC2PQ6P474 469 aa11.3□□□□□ -0.6
PDLIM5-210ENST00000508216 ATG9AQ7Z3C6 839 aa11.3□□□□□ -0.6
PDLIM5-210ENST00000508216 HAUS6Q7Z4H7 955 aa11.3□□□□□ -0.6
PDLIM5-210ENST00000508216 AKAP14Q86UN6 197 aa11.3□□□□□ -0.6
PDLIM5-210ENST00000508216 CDAN1Q8IWY9 1227 aa11.3□□□□□ -0.6
PDLIM5-210ENST00000508216 SIMC1Q8NDZ2 872 aa11.3□□□□□ -0.6
PDLIM5-210ENST00000508216 SPATA20Q8TB22 786 aa11.3□□□□□ -0.6
PDLIM5-210ENST00000508216 SH3RF3Q8TEJ3 882 aaPredicted RBP11.3□□□□□ -0.6
PDLIM5-210ENST00000508216 TP53INP1Q96A56 240 aa11.3□□□□□ -0.6
PDLIM5-210ENST00000508216 SH3KBP1Q96B97 665 aa11.3□□□□□ -0.6
PDLIM5-210ENST00000508216 LRRC37BQ96QE4 947 aa11.3□□□□□ -0.6
PDLIM5-210ENST00000508216 CCDC113Q9H0I3 377 aa11.3□□□□□ -0.6
PDLIM5-210ENST00000508216 EBF3Q9H4W6 596 aa11.3□□□□□ -0.6
PDLIM5-210ENST00000508216 THG1LQ9NWX6 298 aaKnown RBP11.3□□□□□ -0.6
PDLIM5-210ENST00000508216 GPRC5BQ9NZH0 403 aa11.3□□□□□ -0.6
PDLIM5-210ENST00000508216 SUCOQ9UBS9 1254 aaKnown RBP11.3□□□□□ -0.6
PDLIM5-210ENST00000508216 ARHGAP26Q9UNA1 814 aa11.3□□□□□ -0.6
PDLIM5-210ENST00000508216 UNC13BO14795 1591 aa11.3□□□□□ -0.6
PDLIM5-210ENST00000508216 MED23Q9ULK4 1368 aa11.3□□□□□ -0.6
PDLIM5-210ENST00000508216 ZNF335Q9H4Z2 1342 aaPredicted RBP11.29□□□□□ -0.6
PDLIM5-210ENST00000508216 SMCO2A6NFE2 343 aa11.29□□□□□ -0.6
PDLIM5-210ENST00000508216 EVPLLA8MZ36 301 aa11.29□□□□□ -0.6
PDLIM5-210ENST00000508216 CYP3A5P20815 502 aa11.29□□□□□ -0.6
PDLIM5-210ENST00000508216 SLC9A3P48764 834 aa11.29□□□□□ -0.6
PDLIM5-210ENST00000508216 GPR85P60893 370 aa11.29□□□□□ -0.6
PDLIM5-210ENST00000508216 IGBP1P78318 339 aa11.29□□□□□ -0.6
PDLIM5-210ENST00000508216 KDSRQ06136 332 aa11.29□□□□□ -0.6
PDLIM5-210ENST00000508216 FMR1Q06787 632 aaKnown RBP eCLIP11.29□□□□□ -0.63e-9■■■■■ 33
PDLIM5-210ENST00000508216 SELENBP1Q13228 472 aa11.29□□□□□ -0.6
PDLIM5-210ENST00000508216 TRMT5Q32P41 509 aaKnown RBP11.29□□□□□ -0.6
PDLIM5-210ENST00000508216 SLC45A4Q5BKX6 768 aa11.29□□□□□ -0.6
PDLIM5-210ENST00000508216 HP1BP3Q5SSJ5 553 aaPredicted RBP11.29□□□□□ -0.6
PDLIM5-210ENST00000508216 EGFLAMQ63HQ2 1017 aa11.29□□□□□ -0.6
PDLIM5-210ENST00000508216 MPRIPQ6WCQ1 1025 aa11.29□□□□□ -0.6
PDLIM5-210ENST00000508216 RGS9BPQ6ZS82 235 aa11.29□□□□□ -0.6
PDLIM5-210ENST00000508216 RALGPS2Q86X27 583 aaPredicted RBP11.29□□□□□ -0.6
PDLIM5-210ENST00000508216 UNC5CLQ8IV45 518 aa11.29□□□□□ -0.6
PDLIM5-210ENST00000508216 GRPEL2Q8TAA5 225 aa11.29□□□□□ -0.6
PDLIM5-210ENST00000508216 SPATA18Q8TC71 538 aa11.29□□□□□ -0.6
PDLIM5-210ENST00000508216 TAMM41Q96BW9 452 aa11.29□□□□□ -0.6
PDLIM5-210ENST00000508216 TOE1Q96GM8 510 aaKnown RBP11.29□□□□□ -0.6
PDLIM5-210ENST00000508216 NLRP4Q96MN2 994 aa11.29□□□□□ -0.6
PDLIM5-210ENST00000508216 BTBD10Q9BSF8 475 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms