RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 ATG4AQ8WYN0 398 aa18.65■□□□□ 0.58
SFXN1-208ENST00000507823 EFR3BQ9Y2G0 817 aa18.65■□□□□ 0.58
SFXN1-208ENST00000507823 ATP8A1Q9Y2Q0 1164 aa18.65■□□□□ 0.58
SFXN1-208ENST00000507823 RARGP13631 454 aa18.65■□□□□ 0.58
SFXN1-208ENST00000507823 STILQ15468 1287 aa18.65■□□□□ 0.58
SFXN1-208ENST00000507823 TAZQ16635 292 aa18.65■□□□□ 0.58
SFXN1-208ENST00000507823 CATSPER4Q7RTX7 472 aa18.65■□□□□ 0.58
SFXN1-208ENST00000507823 CCDC50Q8IVM0 306 aa18.65■□□□□ 0.58
SFXN1-208ENST00000507823 ZMAT2Q96NC0 199 aaKnown RBP18.65■□□□□ 0.58
SFXN1-208ENST00000507823 TMEM109Q9BVC6 243 aa18.65■□□□□ 0.58
SFXN1-208ENST00000507823 PTPN22Q9Y2R2 807 aa18.65■□□□□ 0.58
SFXN1-208ENST00000507823 SCN1AP35498 2009 aa18.64■□□□□ 0.57
SFXN1-208ENST00000507823 GOLGA6L10A6NI86 522 aa18.64■□□□□ 0.57
SFXN1-208ENST00000507823 GAS8O95995 478 aa18.64■□□□□ 0.57
SFXN1-208ENST00000507823 ERBB2P04626 1255 aa18.64■□□□□ 0.57
SFXN1-208ENST00000507823 KRT3P12035 628 aa18.64■□□□□ 0.57
SFXN1-208ENST00000507823 RFC1P35251 1148 aaPredicted RBP18.64■□□□□ 0.57
SFXN1-208ENST00000507823 ACAP1Q15027 740 aa18.64■□□□□ 0.57
SFXN1-208ENST00000507823 PPP1R7Q15435 360 aa18.64■□□□□ 0.57
SFXN1-208ENST00000507823 XKR4Q5GH76 650 aa18.64■□□□□ 0.57
SFXN1-208ENST00000507823 SH2D3CQ8N5H7 860 aa18.64■□□□□ 0.57
SFXN1-208ENST00000507823 SOCS4Q8WXH5 440 aa18.64■□□□□ 0.57
SFXN1-208ENST00000507823 FAM49AQ9H0Q0 323 aaPredicted RBP18.64■□□□□ 0.57
SFXN1-208ENST00000507823 TJP2Q9UDY2 1190 aa18.64■□□□□ 0.57
SFXN1-208ENST00000507823 RGS2P41220 211 aa18.64■□□□□ 0.57
SFXN1-208ENST00000507823 NDST1P52848 882 aa18.64■□□□□ 0.57
SFXN1-208ENST00000507823 PSMC1P62191 440 aaKnown RBP18.64■□□□□ 0.57
SFXN1-208ENST00000507823 SLC25A11Q02978 314 aaKnown RBP18.64■□□□□ 0.57
SFXN1-208ENST00000507823 CAV1Q03135 178 aa18.64■□□□□ 0.57
SFXN1-208ENST00000507823 MYO1EQ12965 1108 aa18.64■□□□□ 0.57
SFXN1-208ENST00000507823 PDCLQ13371 301 aa18.64■□□□□ 0.57
SFXN1-208ENST00000507823 SPOCD1Q6ZMY3 1216 aa18.64■□□□□ 0.57
SFXN1-208ENST00000507823 ARFGAP1Q8N6T3 406 aa18.64■□□□□ 0.57
SFXN1-208ENST00000507823 OR2W6PQ8NHA6 318 aa18.64■□□□□ 0.57
SFXN1-208ENST00000507823 APBA2Q99767 749 aa18.64■□□□□ 0.57
SFXN1-208ENST00000507823 HEMGNQ9BXL5 484 aa18.64■□□□□ 0.57
SFXN1-208ENST00000507823 EIF2AQ9BY44 585 aaKnown RBP18.64■□□□□ 0.57
SFXN1-208ENST00000507823 SNTG2Q9NY99 539 aa18.64■□□□□ 0.57
SFXN1-208ENST00000507823 CYP3A5P20815 502 aa18.63■□□□□ 0.57
SFXN1-208ENST00000507823 CCL14Q16627 93 aa18.63■□□□□ 0.57
SFXN1-208ENST00000507823 ATP13A4Q4VNC1 1196 aa18.63■□□□□ 0.57
SFXN1-208ENST00000507823 MFSD7Q6UXD7 560 aa18.63■□□□□ 0.57
SFXN1-208ENST00000507823 LRRC31Q6UY01 552 aa18.63■□□□□ 0.57
SFXN1-208ENST00000507823 JOSD2Q8TAC2 188 aa18.63■□□□□ 0.57
SFXN1-208ENST00000507823 RNF25Q96BH1 459 aaPredicted RBP18.63■□□□□ 0.57
SFXN1-208ENST00000507823 SNF8Q96H20 258 aa18.63■□□□□ 0.57
SFXN1-208ENST00000507823 OSMRQ99650 979 aa18.63■□□□□ 0.57
SFXN1-208ENST00000507823 NT5C1AQ9BXI3 368 aa18.63■□□□□ 0.57
SFXN1-208ENST00000507823 CAPS2Q9BXY5 557 aa18.63■□□□□ 0.57
SFXN1-208ENST00000507823 GRIN2DO15399 1336 aa18.63■□□□□ 0.57
SFXN1-208ENST00000507823 hCG_1818297A0A087WSY0 165 aa18.63■□□□□ 0.57
SFXN1-208ENST00000507823 ERICH4A6NGS2 130 aa18.63■□□□□ 0.57
SFXN1-208ENST00000507823 C3orf70A6NLC5 250 aaPredicted RBP18.63■□□□□ 0.57
SFXN1-208ENST00000507823 KRT1P04264 644 aa18.63■□□□□ 0.57
SFXN1-208ENST00000507823 IRAK1P51617 712 aa18.63■□□□□ 0.57
SFXN1-208ENST00000507823 ZNF157P51786 506 aaPredicted RBP18.63■□□□□ 0.57
SFXN1-208ENST00000507823 INHBEP58166 350 aa18.63■□□□□ 0.57
SFXN1-208ENST00000507823 CALCOCO2Q13137 446 aa18.63■□□□□ 0.57
SFXN1-208ENST00000507823 SNX1Q13596 522 aa18.63■□□□□ 0.57
SFXN1-208ENST00000507823 LLGL1Q15334 1064 aa18.63■□□□□ 0.57
SFXN1-208ENST00000507823 KCTD16Q68DU8 428 aa18.63■□□□□ 0.57
SFXN1-208ENST00000507823 LEKR1Q6ZMV7 388 aa18.63■□□□□ 0.57
SFXN1-208ENST00000507823 IFNL1Q8IU54 200 aa18.63■□□□□ 0.57
SFXN1-208ENST00000507823 CXCL16Q9H2A7 254 aa18.63■□□□□ 0.57
SFXN1-208ENST00000507823 AAASQ9NRG9 546 aa18.63■□□□□ 0.57
SFXN1-208ENST00000507823 TJP3O95049 919 aa18.62■□□□□ 0.57
SFXN1-208ENST00000507823 NR1D1P20393 614 aa18.62■□□□□ 0.57
SFXN1-208ENST00000507823 CDKN2BP42772 138 aa18.62■□□□□ 0.57
SFXN1-208ENST00000507823 SNX17Q15036 470 aa18.62■□□□□ 0.57
SFXN1-208ENST00000507823 PKDCCQ504Y2 493 aa18.62■□□□□ 0.57
SFXN1-208ENST00000507823 NME8Q8N427 588 aa18.62■□□□□ 0.57
SFXN1-208ENST00000507823 KATNAL1Q9BW62 490 aa18.62■□□□□ 0.57
SFXN1-208ENST00000507823 TSPYL1Q9H0U9 437 aa18.62■□□□□ 0.57
SFXN1-208ENST00000507823 DRG1Q9Y295 367 aaKnown RBP18.62■□□□□ 0.57
SFXN1-208ENST00000507823 TRIP12Q14669 1992 aaPredicted RBP18.62■□□□□ 0.57
SFXN1-208ENST00000507823 LIASO43766 372 aa18.62■□□□□ 0.57
SFXN1-208ENST00000507823 LRCH4O75427 683 aa18.62■□□□□ 0.57
SFXN1-208ENST00000507823 KLRC2P26717 231 aa18.62■□□□□ 0.57
SFXN1-208ENST00000507823 LMNB2Q03252 620 aa18.62■□□□□ 0.57
SFXN1-208ENST00000507823 ADCY2Q08462 1091 aa18.62■□□□□ 0.57
SFXN1-208ENST00000507823 TMEM62Q0P6H9 643 aa18.62■□□□□ 0.57
SFXN1-208ENST00000507823 ORC1Q13415 861 aa18.62■□□□□ 0.57
SFXN1-208ENST00000507823 ZSCAN26Q16670 478 aa18.62■□□□□ 0.57
SFXN1-208ENST00000507823 TXNRD3NBQ6F5E7 133 aa18.62■□□□□ 0.57
SFXN1-208ENST00000507823 BEST2Q8NFU1 509 aa18.62■□□□□ 0.57
SFXN1-208ENST00000507823 HEXIM2Q96MH2 286 aaKnown RBP18.62■□□□□ 0.57
SFXN1-208ENST00000507823 M0QYV0 167 aa18.61■□□□□ 0.57
SFXN1-208ENST00000507823 PFKMP08237 780 aa18.61■□□□□ 0.57
SFXN1-208ENST00000507823 SLC10A3P09131 477 aa18.61■□□□□ 0.57
SFXN1-208ENST00000507823 PSMA2P25787 234 aa18.61■□□□□ 0.57
SFXN1-208ENST00000507823 SSR1P43307 286 aaKnown RBP18.61■□□□□ 0.57
SFXN1-208ENST00000507823 YARSP54577 528 aaKnown RBP18.61■□□□□ 0.57
SFXN1-208ENST00000507823 TFDP3Q5H9I0 405 aa18.61■□□□□ 0.57
SFXN1-208ENST00000507823 CHADLQ6NUI6 762 aa18.61■□□□□ 0.57
SFXN1-208ENST00000507823 TRMT10CQ7L0Y3 403 aaKnown RBP18.61■□□□□ 0.57
SFXN1-208ENST00000507823 CROCCP2Q86T23 111 aa18.61■□□□□ 0.57
SFXN1-208ENST00000507823 RAPGEF5Q92565 580 aa18.61■□□□□ 0.57
SFXN1-208ENST00000507823 LENG1Q96BZ8 264 aaPredicted RBP18.61■□□□□ 0.57
SFXN1-208ENST00000507823 TLCD1Q96CP7 247 aa18.61■□□□□ 0.57
SFXN1-208ENST00000507823 MIS12Q9H081 205 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms