RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 EEF1GP26641 437 aaKnown RBP4.19□□□□□ -1.74
LSM6-205ENST00000507449 GCLCP48506 637 aaPredicted RBP4.19□□□□□ -1.74
LSM6-205ENST00000507449 LILRA4P59901 499 aa4.19□□□□□ -1.74
LSM6-205ENST00000507449 PLP2Q04941 152 aa4.19□□□□□ -1.74
LSM6-205ENST00000507449 BTKQ06187 659 aa4.19□□□□□ -1.74
LSM6-205ENST00000507449 KRT72Q14CN4 511 aa4.19□□□□□ -1.74
LSM6-205ENST00000507449 PRKD1Q15139 912 aaPredicted RBP4.19□□□□□ -1.74
LSM6-205ENST00000507449 GRAMD1BQ3KR37 738 aa4.19□□□□□ -1.74
LSM6-205ENST00000507449 ARL13BQ3SXY8 428 aa4.19□□□□□ -1.74
LSM6-205ENST00000507449 AMOTQ4VCS5 1084 aa4.19□□□□□ -1.74
LSM6-205ENST00000507449 SLC44A4Q53GD3 710 aa4.19□□□□□ -1.74
LSM6-205ENST00000507449 RRAGBQ5VZM2 374 aa4.19□□□□□ -1.74
LSM6-205ENST00000507449 FCRL6Q6DN72 434 aa4.19□□□□□ -1.74
LSM6-205ENST00000507449 SPATA31D4Q6ZUB0 917 aa4.19□□□□□ -1.74
LSM6-205ENST00000507449 CERS3Q8IU89 383 aa4.19□□□□□ -1.74
LSM6-205ENST00000507449 TMEM132CQ8N3T6 1108 aa4.19□□□□□ -1.74
LSM6-205ENST00000507449 VGLL2Q8N8G2 317 aa4.19□□□□□ -1.74
LSM6-205ENST00000507449 ENAHQ8N8S7 591 aaPredicted RBP4.19□□□□□ -1.74
LSM6-205ENST00000507449 EXTL1Q92935 676 aa4.19□□□□□ -1.74
LSM6-205ENST00000507449 ADAM2Q99965 735 aa4.19□□□□□ -1.74
LSM6-205ENST00000507449 TTLL2Q9BWV7 592 aa4.19□□□□□ -1.74
LSM6-205ENST00000507449 SLC46A2Q9BY10 475 aa4.19□□□□□ -1.74
LSM6-205ENST00000507449 ARFGAP3Q9NP61 516 aa4.19□□□□□ -1.74
LSM6-205ENST00000507449 DKK2Q9UBU2 259 aa4.19□□□□□ -1.74
LSM6-205ENST00000507449 KCNE5Q9UJ90 142 aa4.19□□□□□ -1.74
LSM6-205ENST00000507449 ITGB1BP2Q9UKP3 347 aa4.19□□□□□ -1.74
LSM6-205ENST00000507449 CNOT11Q9UKZ1 510 aaKnown RBP4.19□□□□□ -1.74
LSM6-205ENST00000507449 TCAF1Q9Y4C2 921 aa4.19□□□□□ -1.74
LSM6-205ENST00000507449 PAXBP1Q9Y5B6 917 aa4.19□□□□□ -1.74
LSM6-205ENST00000507449 A0A087WV62 115 aa4.18□□□□□ -1.74
LSM6-205ENST00000507449 A0A1W2PS29 197 aa4.18□□□□□ -1.74
LSM6-205ENST00000507449 H7C4K7 107 aa4.18□□□□□ -1.74
LSM6-205ENST00000507449 MYO1CO00159 1063 aa4.18□□□□□ -1.74
LSM6-205ENST00000507449 AKAP8O43823 692 aaKnown RBP4.18□□□□□ -1.74
LSM6-205ENST00000507449 PLA2G6O60733 806 aa4.18□□□□□ -1.74
LSM6-205ENST00000507449 TCEA3O75764 348 aa4.18□□□□□ -1.74
LSM6-205ENST00000507449 A1BGP04217 495 aa4.18□□□□□ -1.74
LSM6-205ENST00000507449 BTF3P20290 206 aaKnown RBP4.18□□□□□ -1.74
LSM6-205ENST00000507449 ANXA11P50995 505 aaKnown RBP4.18□□□□□ -1.74
LSM6-205ENST00000507449 KRTAP10-2P60368 255 aa4.18□□□□□ -1.74
LSM6-205ENST00000507449 CXADRP78310 365 aa4.18□□□□□ -1.74
LSM6-205ENST00000507449 MXRA7P84157 204 aa4.18□□□□□ -1.74
LSM6-205ENST00000507449 DHX8Q14562 1220 aaKnown RBP4.18□□□□□ -1.74
LSM6-205ENST00000507449 IQCB1Q15051 598 aa4.18□□□□□ -1.74
LSM6-205ENST00000507449 NPY5RQ15761 445 aa4.18□□□□□ -1.74
LSM6-205ENST00000507449 CYP2A13Q16696 494 aa4.18□□□□□ -1.74
LSM6-205ENST00000507449 GEN1Q17RS7 908 aa4.18□□□□□ -1.74
LSM6-205ENST00000507449 BEAN1Q3B7T3 259 aa4.18□□□□□ -1.74
LSM6-205ENST00000507449 PLA1AQ53H76 456 aa4.18□□□□□ -1.74
LSM6-205ENST00000507449 GORABQ5T7V8 394 aa4.18□□□□□ -1.74
LSM6-205ENST00000507449 CATSPERGQ6ZRH7 1159 aa4.18□□□□□ -1.74
LSM6-205ENST00000507449 KCTD20Q7Z5Y7 419 aa4.18□□□□□ -1.74
LSM6-205ENST00000507449 PALM2Q8IXS6 379 aa4.18□□□□□ -1.74
LSM6-205ENST00000507449 MED15Q96RN5 788 aa4.18□□□□□ -1.74
LSM6-205ENST00000507449 HEPHQ9BQS7 1158 aa4.18□□□□□ -1.74
LSM6-205ENST00000507449 MYH16Q9H6N6 1097 aa4.18□□□□□ -1.74
LSM6-205ENST00000507449 AKIP1Q9NQ31 210 aa4.18□□□□□ -1.74
LSM6-205ENST00000507449 SERHLQ9NQF3 203 aa4.18□□□□□ -1.74
LSM6-205ENST00000507449 XPNPEP3Q9NQH7 507 aa4.18□□□□□ -1.74
LSM6-205ENST00000507449 TBC1D23Q9NUY8 699 aa4.18□□□□□ -1.74
LSM6-205ENST00000507449 SMPD4Q9NXE4 827 aa4.18□□□□□ -1.74
LSM6-205ENST00000507449 DNMT3BQ9UBC3 853 aaKnown RBP4.18□□□□□ -1.74
LSM6-205ENST00000507449 MAN2B2Q9Y2E5 1009 aa4.18□□□□□ -1.74
LSM6-205ENST00000507449 RAD54BQ9Y620 910 aa4.18□□□□□ -1.74
LSM6-205ENST00000507449 FPGT-TNNI3KV9GXZ4 949 aa4.18□□□□□ -1.74
LSM6-205ENST00000507449 PRAMEF33A0A0G2JMD5 474 aa4.17□□□□□ -1.74
LSM6-205ENST00000507449 E7ENX8 843 aa4.17□□□□□ -1.74
LSM6-205ENST00000507449 hCG_1984214I3L0E3 225 aa4.17□□□□□ -1.74
LSM6-205ENST00000507449 TOR1BO14657 336 aa4.17□□□□□ -1.74
LSM6-205ENST00000507449 AREL1O15033 823 aa4.17□□□□□ -1.74
LSM6-205ENST00000507449 MUSKO15146 869 aa4.17□□□□□ -1.74
LSM6-205ENST00000507449 THAP12O43422 761 aa4.17□□□□□ -1.74
LSM6-205ENST00000507449 PRAMEF10O60809 474 aa4.17□□□□□ -1.74
LSM6-205ENST00000507449 RASSF9O75901 435 aa4.17□□□□□ -1.74
LSM6-205ENST00000507449 NDST3O95803 873 aa4.17□□□□□ -1.74
LSM6-205ENST00000507449 ATXN1LP0C7T5 689 aaKnown RBP4.17□□□□□ -1.74
LSM6-205ENST00000507449 CYP2C9P11712 490 aa4.17□□□□□ -1.74
LSM6-205ENST00000507449 ACVR2AP27037 513 aa4.17□□□□□ -1.74
LSM6-205ENST00000507449 IL1R2P27930 398 aa4.17□□□□□ -1.74
LSM6-205ENST00000507449 GABRB3P28472 473 aa4.17□□□□□ -1.74
LSM6-205ENST00000507449 MAPK10P53779 464 aa4.17□□□□□ -1.74
LSM6-205ENST00000507449 LOXL3P58215 753 aa4.17□□□□□ -1.74
LSM6-205ENST00000507449 TNFAIP2Q03169 654 aa4.17□□□□□ -1.74
LSM6-205ENST00000507449 TAP2Q03519 686 aa4.17□□□□□ -1.74
LSM6-205ENST00000507449 SCAPQ12770 1279 aa4.17□□□□□ -1.74
LSM6-205ENST00000507449 DYRK1AQ13627 763 aa4.17□□□□□ -1.74
LSM6-205ENST00000507449 CD300EQ496F6 205 aaPredicted RBP4.17□□□□□ -1.74
LSM6-205ENST00000507449 SPDYAQ5MJ70 313 aa4.17□□□□□ -1.74
LSM6-205ENST00000507449 TMEM108Q6UXF1 575 aa4.17□□□□□ -1.74
LSM6-205ENST00000507449 TSHZ1Q6ZSZ6 1077 aa4.17□□□□□ -1.74
LSM6-205ENST00000507449 RNF44Q7L0R7 432 aa4.17□□□□□ -1.74
LSM6-205ENST00000507449 ADGRG5Q8IZF4 528 aa4.17□□□□□ -1.74
LSM6-205ENST00000507449 FAM109AQ8N4B1 249 aa4.17□□□□□ -1.74
LSM6-205ENST00000507449 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.17□□□□□ -1.74
LSM6-205ENST00000507449 FANCBQ8NB91 859 aa4.17□□□□□ -1.74
LSM6-205ENST00000507449 CHST13Q8NET6 341 aa4.17□□□□□ -1.74
LSM6-205ENST00000507449 LRRC46Q96FV0 321 aa4.17□□□□□ -1.74
LSM6-205ENST00000507449 TMEM41AQ96HV5 264 aa4.17□□□□□ -1.74
LSM6-205ENST00000507449 NELL2Q99435 816 aa4.17□□□□□ -1.74
LSM6-205ENST00000507449 POLR3GLQ9BT43 218 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms