RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 PRCPP42785 496 aa16.63■□□□□ 0.25
MED28-204ENST00000506409 VAMP7P51809 220 aa16.63■□□□□ 0.25
MED28-204ENST00000506409 PSMC1P62191 440 aaKnown RBP16.63■□□□□ 0.25
MED28-204ENST00000506409 CCDC142Q17RM4 750 aa16.63■□□□□ 0.25
MED28-204ENST00000506409 ZNF699Q32M78 642 aa16.63■□□□□ 0.25
MED28-204ENST00000506409 EDRF1Q3B7T1 1238 aa16.63■□□□□ 0.25
MED28-204ENST00000506409 ZACNQ401N2 412 aa16.63■□□□□ 0.25
MED28-204ENST00000506409 FAM78AQ5JUQ0 283 aa16.63■□□□□ 0.25
MED28-204ENST00000506409 SPATA2LQ8IUW3 424 aaPredicted RBP16.63■□□□□ 0.25
MED28-204ENST00000506409 ELOA2Q8IYF1 753 aaPredicted RBP16.63■□□□□ 0.25
MED28-204ENST00000506409 FAM186BQ8IYM0 893 aa16.63■□□□□ 0.25
MED28-204ENST00000506409 GPR152Q8TDT2 470 aa16.63■□□□□ 0.25
MED28-204ENST00000506409 GIPC2Q8TF65 315 aa16.63■□□□□ 0.25
MED28-204ENST00000506409 MRPL45Q9BRJ2 306 aaKnown RBP16.63■□□□□ 0.25
MED28-204ENST00000506409 GTPBP4Q9BZE4 634 aaKnown RBP16.63■□□□□ 0.25
MED28-204ENST00000506409 SNX25Q9H3E2 840 aa16.63■□□□□ 0.25
MED28-204ENST00000506409 ZNF334Q9HCZ1 680 aaPredicted RBP16.63■□□□□ 0.25
MED28-204ENST00000506409 SLC2A4RGQ9NR83 387 aa16.63■□□□□ 0.25
MED28-204ENST00000506409 ZNF318Q5VUA4 2279 aa16.63■□□□□ 0.25
MED28-204ENST00000506409 ATP2C2O75185 946 aa16.62■□□□□ 0.25
MED28-204ENST00000506409 ECI2O75521 394 aa16.62■□□□□ 0.25
MED28-204ENST00000506409 VNN1O95497 513 aa16.62■□□□□ 0.25
MED28-204ENST00000506409 PDGFRBP09619 1106 aa16.62■□□□□ 0.25
MED28-204ENST00000506409 FAM163BP0C2L3 166 aa16.62■□□□□ 0.25
MED28-204ENST00000506409 CYP2F1P24903 491 aa16.62■□□□□ 0.25
MED28-204ENST00000506409 GABRR2P28476 465 aa16.62■□□□□ 0.25
MED28-204ENST00000506409 GNL1P36915 607 aaPredicted RBP16.62■□□□□ 0.25
MED28-204ENST00000506409 VCPP55072 806 aaKnown RBP16.62■□□□□ 0.25
MED28-204ENST00000506409 RPL10AP62906 217 aaKnown RBP16.62■□□□□ 0.25
MED28-204ENST00000506409 GPC5P78333 572 aa16.62■□□□□ 0.25
MED28-204ENST00000506409 MAPRE1Q15691 268 aaKnown RBP16.62■□□□□ 0.25
MED28-204ENST00000506409 CFAP221Q4G0U5 840 aa16.62■□□□□ 0.25
MED28-204ENST00000506409 COBLL1Q53SF7 1204 aa16.62■□□□□ 0.25
MED28-204ENST00000506409 ZNF667Q5HYK9 610 aa16.62■□□□□ 0.25
MED28-204ENST00000506409 TANGO2Q6ICL3 276 aa16.62■□□□□ 0.25
MED28-204ENST00000506409 FAM171BQ6P995 826 aa16.62■□□□□ 0.25
MED28-204ENST00000506409 C4orf50Q6ZRC1 276 aa16.62■□□□□ 0.25
MED28-204ENST00000506409 GAREM2Q75VX8 874 aa16.62■□□□□ 0.25
MED28-204ENST00000506409 SV2AQ7L0J3 742 aa16.62■□□□□ 0.25
MED28-204ENST00000506409 OR6B3Q8NGW1 331 aa16.62■□□□□ 0.25
MED28-204ENST00000506409 SMARCD2Q92925 531 aa16.62■□□□□ 0.25
MED28-204ENST00000506409 FUBP3Q96I24 572 aaKnown RBP eCLIP16.62■□□□□ 0.25
MED28-204ENST00000506409 ZSWIM3Q96MP5 696 aa16.62■□□□□ 0.25
MED28-204ENST00000506409 ASB16Q96NS5 453 aa16.62■□□□□ 0.25
MED28-204ENST00000506409 GPR88Q9GZN0 384 aa16.62■□□□□ 0.25
MED28-204ENST00000506409 ATXN3LQ9H3M9 355 aa16.62■□□□□ 0.25
MED28-204ENST00000506409 VRTNQ9H8Y1 702 aa16.62■□□□□ 0.25
MED28-204ENST00000506409 ZFP14Q9HCL3 533 aa16.62■□□□□ 0.25
MED28-204ENST00000506409 CA14Q9ULX7 337 aa16.62■□□□□ 0.25
MED28-204ENST00000506409 ARIH1Q9Y4X5 557 aaPredicted RBP16.62■□□□□ 0.25
MED28-204ENST00000506409 FCARP24071 287 aa16.61■□□□□ 0.25
MED28-204ENST00000506409 AVPR2P30518 371 aa16.61■□□□□ 0.25
MED28-204ENST00000506409 GPR15P49685 360 aa16.61■□□□□ 0.25
MED28-204ENST00000506409 ENPEPQ07075 957 aa16.61■□□□□ 0.25
MED28-204ENST00000506409 C1orf220Q5T0J3 134 aa16.61■□□□□ 0.25
MED28-204ENST00000506409 FLCNQ8NFG4 579 aa16.61■□□□□ 0.25
MED28-204ENST00000506409 ZSCAN18Q8TBC5 510 aaPredicted RBP16.61■□□□□ 0.25
MED28-204ENST00000506409 MYLPFQ96A32 169 aa16.61■□□□□ 0.25
MED28-204ENST00000506409 ELSPBP1Q96BH3 223 aa16.61■□□□□ 0.25
MED28-204ENST00000506409 EEF2KMTQ96G04 330 aa16.61■□□□□ 0.25
MED28-204ENST00000506409 GCNAQ96QF7 691 aa16.61■□□□□ 0.25
MED28-204ENST00000506409 TSG101Q99816 390 aa16.61■□□□□ 0.25
MED28-204ENST00000506409 MKNK1Q9BUB5 465 aa16.61■□□□□ 0.25
MED28-204ENST00000506409 SMYD3Q9H7B4 428 aa16.61■□□□□ 0.25
MED28-204ENST00000506409 CRTAC1Q9NQ79 661 aa16.61■□□□□ 0.25
MED28-204ENST00000506409 KRBA1A5PL33 1030 aa16.6■□□□□ 0.25
MED28-204ENST00000506409 A8MXQ7 604 aa16.6■□□□□ 0.25
MED28-204ENST00000506409 CETN3O15182 167 aa16.6■□□□□ 0.25
MED28-204ENST00000506409 TRIM49P0CI25 452 aa16.6■□□□□ 0.25
MED28-204ENST00000506409 TRIM49CP0CI26 452 aa16.6■□□□□ 0.25
MED28-204ENST00000506409 CSH1P0DML2 217 aa16.6■□□□□ 0.25
MED28-204ENST00000506409 CSH2P0DML3 217 aa16.6■□□□□ 0.25
MED28-204ENST00000506409 EPB41P11171 864 aaKnown RBP16.6■□□□□ 0.25
MED28-204ENST00000506409 P4HA1P13674 534 aa16.6■□□□□ 0.25
MED28-204ENST00000506409 CDC25CP30307 473 aa16.6■□□□□ 0.25
MED28-204ENST00000506409 PIK3CAP42336 1068 aa16.6■□□□□ 0.25
MED28-204ENST00000506409 GCLMP48507 274 aa16.6■□□□□ 0.25
MED28-204ENST00000506409 CYP27A1Q02318 531 aa16.6■□□□□ 0.25
MED28-204ENST00000506409 STIM1Q13586 685 aa16.6■□□□□ 0.25
MED28-204ENST00000506409 DDR2Q16832 855 aa16.6■□□□□ 0.25
MED28-204ENST00000506409 SGSM1Q2NKQ1 1148 aa16.6■□□□□ 0.25
MED28-204ENST00000506409 ARHGAP15Q53QZ3 475 aa16.6■□□□□ 0.25
MED28-204ENST00000506409 STXBP5Q5T5C0 1151 aa16.6■□□□□ 0.25
MED28-204ENST00000506409 SDHAF4Q5VUM1 108 aa16.6■□□□□ 0.25
MED28-204ENST00000506409 ISM2Q6H9L7 571 aa16.6■□□□□ 0.25
MED28-204ENST00000506409 ASTLQ6HA08 431 aaPredicted RBP16.6■□□□□ 0.25
MED28-204ENST00000506409 SCARA5Q6ZMJ2 495 aa16.6■□□□□ 0.25
MED28-204ENST00000506409 ADSSL1Q8N142 457 aa16.6■□□□□ 0.25
MED28-204ENST00000506409 MYCBPAPQ8TBZ2 947 aa16.6■□□□□ 0.25
MED28-204ENST00000506409 ELMO3Q96BJ8 720 aa16.6■□□□□ 0.25
MED28-204ENST00000506409 PLA2G2FQ9BZM2 168 aa16.6■□□□□ 0.25
MED28-204ENST00000506409 KCNH6Q9H252 994 aa16.6■□□□□ 0.25
MED28-204ENST00000506409 MMRN2Q9H8L6 949 aa16.6■□□□□ 0.25
MED28-204ENST00000506409 IL21Q9HBE4 155 aa16.6■□□□□ 0.25
MED28-204ENST00000506409 ARHGEF3Q9NR81 526 aa16.6■□□□□ 0.25
MED28-204ENST00000506409 MAGEC2Q9UBF1 373 aaPredicted RBP16.6■□□□□ 0.25
MED28-204ENST00000506409 MAN1B1Q9UKM7 699 aa16.6■□□□□ 0.25
MED28-204ENST00000506409 NME7Q9Y5B8 376 aa16.6■□□□□ 0.25
MED28-204ENST00000506409 PSMA7O14818 248 aa16.59■□□□□ 0.25
MED28-204ENST00000506409 HLA-DRAP01903 254 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms