RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 THG1LQ9NWX6 298 aaKnown RBP3.72□□□□□ -1.81
TCOF1-208ENST00000506063 ZSWIM5Q9P217 1185 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 BCCIPQ9P287 314 aaKnown RBP eCLIP3.72□□□□□ -1.81
TCOF1-208ENST00000506063 SUCLA2Q9P2R7 463 aaPredicted RBP3.72□□□□□ -1.81
TCOF1-208ENST00000506063 DKK3Q9UBP4 350 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 AFF4Q9UHB7 1163 aaKnown RBP3.72□□□□□ -1.81
TCOF1-208ENST00000506063 PCDHA6Q9UN73 950 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 CLCA2Q9UQC9 943 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 PCDHA8Q9Y5H6 950 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 SNX11Q9Y5W9 270 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 CUBNO60494 3623 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 PMS2P1A4D2B8 440 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 IPO5O00410 1097 aaKnown RBP3.71□□□□□ -1.82
TCOF1-208ENST00000506063 BCAT2O15382 392 aaPredicted RBP3.71□□□□□ -1.82
TCOF1-208ENST00000506063 LZTS3O60299 673 aaPredicted RBP3.71□□□□□ -1.82
TCOF1-208ENST00000506063 NOBOXO60393 691 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 AGFG2O95081 481 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 SFTPCP11686 197 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 ARF4P18085 180 aaPredicted RBP3.71□□□□□ -1.82
TCOF1-208ENST00000506063 WT1P19544 449 aaPredicted RBP3.71□□□□□ -1.82
TCOF1-208ENST00000506063 GABRR2P28476 465 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 TIE1P35590 1138 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 CSNK1EP49674 416 aaKnown RBP3.71□□□□□ -1.82
TCOF1-208ENST00000506063 CCT8P50990 548 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 IL9RQ01113 521 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 AMPD2Q01433 879 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 PTH1RQ03431 593 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 SRSF11Q05519 484 aaKnown RBP3.71□□□□□ -1.82
TCOF1-208ENST00000506063 TRAF1Q13077 416 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 USP4Q13107 963 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 PDGFRLQ15198 375 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 ZNF77Q15935 545 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 UPP1Q16831 310 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 HSF5Q4G112 596 aaPredicted RBP3.71□□□□□ -1.82
TCOF1-208ENST00000506063 CAPRIN2Q6IMN6 1127 aaKnown RBP3.71□□□□□ -1.82
TCOF1-208ENST00000506063 LAYNQ6UX15 382 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 SPNS3Q6ZMD2 512 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 MFSD6Q6ZSS7 791 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 RSRC2Q7L4I2 434 aaKnown RBP3.71□□□□□ -1.82
TCOF1-208ENST00000506063 NIPA1Q7RTP0 329 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 SRGAP1Q7Z6B7 1085 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 DNAJB7Q7Z6W7 309 aaPredicted RBP3.71□□□□□ -1.82
TCOF1-208ENST00000506063 C12orf40Q86WS4 652 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 MIB1Q86YT6 1006 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 SMAP1Q8IYB5 467 aaPredicted RBP3.71□□□□□ -1.82
TCOF1-208ENST00000506063 ELMOD1Q8N336 334 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 CPA6Q8N4T0 437 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 OTUD7AQ8TE49 926 aaPredicted RBP3.71□□□□□ -1.82
TCOF1-208ENST00000506063 OSCP1Q8WVF1 389 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 ESR2Q92731 530 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 CUL5Q93034 780 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 IGSF8Q969P0 613 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 PSMG2Q969U7 264 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 CCDC51Q96ER9 411 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 PGBD1Q96JS3 809 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 CNDP2Q96KP4 475 aaKnown RBP3.71□□□□□ -1.82
TCOF1-208ENST00000506063 BCL11AQ9H165 835 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 SLC6A17Q9H1V8 727 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 ATXN3LQ9H3M9 355 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 PSTPIP2Q9H939 334 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 DONSONQ9NYP3 566 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 ATXN7L1Q9ULK2 861 aaPredicted RBP3.71□□□□□ -1.82
TCOF1-208ENST00000506063 MAFFQ9ULX9 164 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 CYP8B1Q9UNU6 501 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 PCDHA10Q9Y5I2 948 aa3.71□□□□□ -1.82
TCOF1-208ENST00000506063 PRRC2CQ9Y520 2896 aaKnown RBP3.71□□□□□ -1.82
TCOF1-208ENST00000506063 E2F8A0AVK6 867 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 METTL12A8MUP2 240 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 KCNJ18B7U540 433 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 N4BP3O15049 544 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 B4GALT5O43286 388 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 MTSS1O43312 755 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 EDIL3O43854 480 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 SMARCA5O60264 1052 aaPredicted RBP3.7□□□□□ -1.82
TCOF1-208ENST00000506063 RAB11FIP3O75154 756 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 TADA3O75528 432 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 SOAT2O75908 522 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 B3GAT3O94766 335 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 MT-CO3P00414 261 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 PRKCGP05129 697 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 C8BP07358 591 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 PSAPP07602 524 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 CTSKP43235 329 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 SLC6A11P48066 632 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 CLCNKBP51801 687 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 ARPP19P56211 112 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 ZXDBP98169 803 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 SOX4Q06945 474 aaPredicted RBP3.7□□□□□ -1.82
TCOF1-208ENST00000506063 ST3GAL1Q11201 340 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 ILKQ13418 452 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 ZNF268Q14587 947 aaPredicted RBP3.7□□□□□ -1.82
TCOF1-208ENST00000506063 MTF1Q14872 753 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 SUZ12Q15022 739 aaKnown RBP3.7□□□□□ -1.82
TCOF1-208ENST00000506063 PROX2Q3B8N5 592 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 MTERF2Q49AM1 385 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 WDR45BQ5MNZ6 344 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 EOGTQ5NDL2 527 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 SYCP2LQ5T4T6 812 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 TYW1BQ6NUM6 668 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 NOTUMQ6P988 496 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms