RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 ARHGEF35A5YM69 484 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 CASTOR2A6NHX0 329 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 RECQL4O94761 1208 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 PRKCBP05771 671 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 RPL17P18621 184 aaKnown RBP5.34□□□□□ -1.55
CDH9-203ENST00000505045 OR1G1P47890 313 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 CLCN4P51793 760 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 ATP2C1P98194 919 aaPredicted RBP5.34□□□□□ -1.55
CDH9-203ENST00000505045 KRT17Q04695 432 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 POU5F1BQ06416 359 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 RAD51AP2Q09MP3 1159 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 ORC2Q13416 577 aaPredicted RBP5.34□□□□□ -1.55
CDH9-203ENST00000505045 TFDP1Q14186 410 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 HERC4Q5GLZ8 1057 aaPredicted RBP5.34□□□□□ -1.55
CDH9-203ENST00000505045 GLRA4Q5JXX5 417 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 RARS2Q5T160 578 aaKnown RBP5.34□□□□□ -1.55
CDH9-203ENST00000505045 SLC27A1Q6PCB7 646 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 SEZ6L2Q6UXD5 910 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 URGCPQ8TCY9 931 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 SLC22A17Q8WUG5 538 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 PGBD4Q96DM1 585 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 CDCA3Q99618 268 aaPredicted RBP5.34□□□□□ -1.55
CDH9-203ENST00000505045 PHF7Q9BWX1 381 aaPredicted RBP5.34□□□□□ -1.55
CDH9-203ENST00000505045 GPR62Q9BZJ7 368 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 TRIM6Q9C030 488 aaPredicted RBP5.34□□□□□ -1.55
CDH9-203ENST00000505045 ACSS3Q9H6R3 686 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 ZFYVE1Q9HBF4 777 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 SNTG2Q9NY99 539 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 PUF60Q9UHX1 559 aaKnown RBP5.34□□□□□ -1.55
CDH9-203ENST00000505045 NOL7Q9UMY1 257 aaKnown RBP5.34□□□□□ -1.55
CDH9-203ENST00000505045 IRAK3Q9Y616 596 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 NPHP3-ACAD11A0A0J9YXS1 232 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 VWA3AA6NCI4 1184 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 C2CD4DB7Z1M9 353 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 ABLIM1O14639 778 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 TEX28O15482 410 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 EIF5BO60841 1220 aaKnown RBP5.34□□□□□ -1.55
CDH9-203ENST00000505045 HIP1RO75146 1068 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 CXCL14O95715 111 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 PDGFBP01127 241 aaPredicted RBP5.34□□□□□ -1.55
CDH9-203ENST00000505045 SOD2P04179 222 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 XRCC6P12956 609 aaKnown RBP eCLIP5.34□□□□□ -1.55
CDH9-203ENST00000505045 AXLP30530 894 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 ADMP35318 185 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 GRIK1P39086 918 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 NAMPTP43490 491 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 NPTX2P47972 431 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 PEX3P56589 373 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 PRPF4BQ13523 1007 aaKnown RBP5.34□□□□□ -1.55
CDH9-203ENST00000505045 ZRSR1Q15695 479 aaKnown RBP5.34□□□□□ -1.55
CDH9-203ENST00000505045 CPSF6Q16630 551 aaKnown RBP eCLIP5.34□□□□□ -1.55
CDH9-203ENST00000505045 FAM187BQ17R55 369 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 RTP2Q5QGT7 225 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 HP1BP3Q5SSJ5 553 aaPredicted RBP5.34□□□□□ -1.55
CDH9-203ENST00000505045 NT5DC1Q5TFE4 455 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 RINT1Q6NUQ1 792 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 FAM173BQ6P4H8 233 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 PAOXQ6QHF9 649 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 TMC5Q6UXY8 1006 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 EXOC8Q8IYI6 725 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 C3orf58Q8NDZ4 430 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 ERMNQ8TAM6 284 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 CASP10Q92851 521 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 CCDC51Q96ER9 411 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 TMEM175Q9BSA9 504 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 HERC2P3Q9BVR0 1158 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 PRMT7Q9NVM4 692 aaPredicted RBP5.34□□□□□ -1.55
CDH9-203ENST00000505045 FAM50BQ9Y247 325 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 FAN1Q9Y2M0 1017 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 GDAQ9Y2T3 454 aa5.34□□□□□ -1.55
CDH9-203ENST00000505045 SCN1AP35498 2009 aa5.33□□□□□ -1.56
CDH9-203ENST00000505045 PHLPP2Q6ZVD8 1323 aa5.33□□□□□ -1.56
CDH9-203ENST00000505045 ZFHX2Q9C0A1 2572 aaPredicted RBP5.33□□□□□ -1.56
CDH9-203ENST00000505045 PRR33A8MZF0 331 aa5.33□□□□□ -1.56
CDH9-203ENST00000505045 ACKR2O00590 384 aa5.33□□□□□ -1.56
CDH9-203ENST00000505045 ADAM12O43184 909 aa5.33□□□□□ -1.56
CDH9-203ENST00000505045 N4BP1O75113 896 aaKnown RBP5.33□□□□□ -1.56
CDH9-203ENST00000505045 GADD45BO75293 160 aaPredicted RBP5.33□□□□□ -1.56
CDH9-203ENST00000505045 RFPL2O75678 378 aa5.33□□□□□ -1.56
CDH9-203ENST00000505045 ASGR2P07307 311 aa5.33□□□□□ -1.56
CDH9-203ENST00000505045 SPATA31D3P0C874 917 aa5.33□□□□□ -1.56
CDH9-203ENST00000505045 PRPHP41219 470 aa5.33□□□□□ -1.56
CDH9-203ENST00000505045 SLC12A3P55017 1021 aa5.33□□□□□ -1.56
CDH9-203ENST00000505045 GRIK3Q13003 919 aa5.33□□□□□ -1.56
CDH9-203ENST00000505045 PCBP1Q15365 356 aaKnown RBP eCLIP5.33□□□□□ -1.56
CDH9-203ENST00000505045 NFKBIBQ15653 356 aa5.33□□□□□ -1.56
CDH9-203ENST00000505045 MAPK6Q16659 721 aa5.33□□□□□ -1.56
CDH9-203ENST00000505045 MSMPQ1L6U9 139 aa5.33□□□□□ -1.56
CDH9-203ENST00000505045 TMEM119Q4V9L6 283 aa5.33□□□□□ -1.56
CDH9-203ENST00000505045 SEZ6Q53EL9 994 aa5.33□□□□□ -1.56
CDH9-203ENST00000505045 FUT10Q6P4F1 479 aa5.33□□□□□ -1.56
CDH9-203ENST00000505045 PRSS55Q6UWB4 352 aaPredicted RBP5.33□□□□□ -1.56
CDH9-203ENST00000505045 CD300LGQ6UXG3 332 aa5.33□□□□□ -1.56
CDH9-203ENST00000505045 SPATA31D4Q6ZUB0 917 aa5.33□□□□□ -1.56
CDH9-203ENST00000505045 C1orf186Q6ZWK4 172 aa5.33□□□□□ -1.56
CDH9-203ENST00000505045 USP49Q70CQ1 688 aa5.33□□□□□ -1.56
CDH9-203ENST00000505045 ZAR1Q86SH2 424 aa5.33□□□□□ -1.56
CDH9-203ENST00000505045 ZBTB8OSQ8IWT0 167 aa5.33□□□□□ -1.56
CDH9-203ENST00000505045 ST13P5Q8NFI4 369 aaPredicted RBP5.33□□□□□ -1.56
CDH9-203ENST00000505045 DEPTORQ8TB45 409 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms