RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 NLRP12P59046 1061 aa7.46□□□□□ -1.22
NPIPB3-203ENST00000504841 LILRA4P59901 499 aa7.46□□□□□ -1.22
NPIPB3-203ENST00000504841 AMPD2Q01433 879 aa7.46□□□□□ -1.22
NPIPB3-203ENST00000504841 ST3GAL1Q11201 340 aa7.46□□□□□ -1.22
NPIPB3-203ENST00000504841 ORC2Q13416 577 aaPredicted RBP7.46□□□□□ -1.22
NPIPB3-203ENST00000504841 MTF1Q14872 753 aa7.46□□□□□ -1.22
NPIPB3-203ENST00000504841 ZBTB6Q15916 424 aa7.46□□□□□ -1.22
NPIPB3-203ENST00000504841 ENOX2Q16206 610 aaKnown RBP7.46□□□□□ -1.22
NPIPB3-203ENST00000504841 FBXO43Q4G163 708 aa7.46□□□□□ -1.22
NPIPB3-203ENST00000504841 SDHAF4Q5VUM1 108 aa7.46□□□□□ -1.22
NPIPB3-203ENST00000504841 KRT79Q5XKE5 535 aa7.46□□□□□ -1.22
NPIPB3-203ENST00000504841 TXNDC8Q6A555 127 aa7.46□□□□□ -1.22
NPIPB3-203ENST00000504841 JADE1Q6IE81 842 aa7.46□□□□□ -1.22
NPIPB3-203ENST00000504841 ZPBP2Q6X784 338 aa7.46□□□□□ -1.22
NPIPB3-203ENST00000504841 C1orf186Q6ZWK4 172 aa7.46□□□□□ -1.22
NPIPB3-203ENST00000504841 ARMCX6Q7L4S7 300 aa7.46□□□□□ -1.22
NPIPB3-203ENST00000504841 SYT13Q7L8C5 426 aa7.46□□□□□ -1.22
NPIPB3-203ENST00000504841 CPA6Q8N4T0 437 aa7.46□□□□□ -1.22
NPIPB3-203ENST00000504841 KDF1Q8NAX2 398 aaPredicted RBP7.46□□□□□ -1.22
NPIPB3-203ENST00000504841 TMEM161BQ8NDZ6 487 aa7.46□□□□□ -1.22
NPIPB3-203ENST00000504841 PIGKQ92643 395 aa7.46□□□□□ -1.22
NPIPB3-203ENST00000504841 MRPS31Q92665 395 aaKnown RBP7.46□□□□□ -1.22
NPIPB3-203ENST00000504841 PYM1Q9BRP8 204 aaKnown RBP7.46□□□□□ -1.22
NPIPB3-203ENST00000504841 HAPLN2Q9GZV7 340 aa7.46□□□□□ -1.22
NPIPB3-203ENST00000504841 ZCWPW1Q9H0M4 648 aa7.46□□□□□ -1.22
NPIPB3-203ENST00000504841 C17orf75Q9HAS0 396 aa7.46□□□□□ -1.22
NPIPB3-203ENST00000504841 PLEKHA5Q9HAU0 1116 aa7.46□□□□□ -1.22
NPIPB3-203ENST00000504841 TDP1Q9NUW8 608 aa7.46□□□□□ -1.22
NPIPB3-203ENST00000504841 DUS2Q9NX74 493 aaKnown RBP7.46□□□□□ -1.22
NPIPB3-203ENST00000504841 WDR87Q6ZQQ6 2873 aa7.46□□□□□ -1.22
NPIPB3-203ENST00000504841 BAHCC1Q9P281 2608 aa7.45□□□□□ -1.22
NPIPB3-203ENST00000504841 NPHP3-ACAD11A0A0J9YXS1 232 aa7.45□□□□□ -1.22
NPIPB3-203ENST00000504841 SPAARA0A1B0GVQ0 90 aa7.45□□□□□ -1.22
NPIPB3-203ENST00000504841 TMEM8BA6NDV4 472 aa7.45□□□□□ -1.22
NPIPB3-203ENST00000504841 K7ENM7 598 aa7.45□□□□□ -1.22
NPIPB3-203ENST00000504841 HNRNPDLO14979 420 aaKnown RBP7.45□□□□□ -1.22
NPIPB3-203ENST00000504841 PRPF40AO75400 957 aaKnown RBP7.45□□□□□ -1.22
NPIPB3-203ENST00000504841 CKMP06732 381 aa7.45□□□□□ -1.22
NPIPB3-203ENST00000504841 HAPLN1P10915 354 aaPredicted RBP7.45□□□□□ -1.22
NPIPB3-203ENST00000504841 CEACAM1P13688 526 aa7.45□□□□□ -1.22
NPIPB3-203ENST00000504841 CYP3A5P20815 502 aa7.45□□□□□ -1.22
NPIPB3-203ENST00000504841 GUCY2CP25092 1073 aa7.45□□□□□ -1.22
NPIPB3-203ENST00000504841 IRX4P78413 519 aa7.45□□□□□ -1.22
NPIPB3-203ENST00000504841 RING1Q06587 406 aa7.45□□□□□ -1.22
NPIPB3-203ENST00000504841 PDGFRLQ15198 375 aa7.45□□□□□ -1.22
NPIPB3-203ENST00000504841 USP39Q53GS9 565 aaKnown RBP7.45□□□□□ -1.22
NPIPB3-203ENST00000504841 C2orf27AQ580R0 203 aa7.45□□□□□ -1.22
NPIPB3-203ENST00000504841 SPATA1Q5VX52 437 aa7.45□□□□□ -1.22
NPIPB3-203ENST00000504841 C9orf57Q5W0N0 161 aa7.45□□□□□ -1.22
NPIPB3-203ENST00000504841 PMS2CLQ68D20 193 aa7.45□□□□□ -1.22
NPIPB3-203ENST00000504841 TMEM150AQ86TG1 271 aa7.45□□□□□ -1.22
NPIPB3-203ENST00000504841 METTL23Q86XA0 190 aa7.45□□□□□ -1.22
NPIPB3-203ENST00000504841 CCDC83Q8IWF9 413 aa7.45□□□□□ -1.22
NPIPB3-203ENST00000504841 THEM5Q8N1Q8 247 aa7.45□□□□□ -1.22
NPIPB3-203ENST00000504841 CCDC33Q8N5R6 958 aa7.45□□□□□ -1.22
NPIPB3-203ENST00000504841 SPIRE2Q8WWL2 714 aa7.45□□□□□ -1.22
NPIPB3-203ENST00000504841 EZH1Q92800 747 aaPredicted RBP7.45□□□□□ -1.22
NPIPB3-203ENST00000504841 GATA6Q92908 595 aa7.45□□□□□ -1.22
NPIPB3-203ENST00000504841 CD101Q93033 1021 aa7.45□□□□□ -1.22
NPIPB3-203ENST00000504841 EXOC4Q96A65 974 aa7.45□□□□□ -1.22
NPIPB3-203ENST00000504841 PI4K2AQ9BTU6 479 aa7.45□□□□□ -1.22
NPIPB3-203ENST00000504841 FOXP1Q9H334 677 aaPredicted RBP7.45□□□□□ -1.22
NPIPB3-203ENST00000504841 ECT2Q9H8V3 914 aa7.45□□□□□ -1.22
NPIPB3-203ENST00000504841 KIF9Q9HAQ2 790 aa7.45□□□□□ -1.22
NPIPB3-203ENST00000504841 HSFX1Q9UBD0 423 aa7.45□□□□□ -1.22
NPIPB3-203ENST00000504841 KLK13Q9UKR3 277 aa7.45□□□□□ -1.22
NPIPB3-203ENST00000504841 DSEQ9UL01 958 aa7.45□□□□□ -1.22
NPIPB3-203ENST00000504841 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.45□□□□□ -1.22
NPIPB3-203ENST00000504841 ATXN2Q99700 1313 aaKnown RBP7.45□□□□□ -1.22
NPIPB3-203ENST00000504841 ZNF638Q14966 1978 aaKnown RBP7.44□□□□□ -1.22
NPIPB3-203ENST00000504841 C2orf72A6NCS6 295 aa7.44□□□□□ -1.22
NPIPB3-203ENST00000504841 ANTXRLA6NF34 631 aa7.44□□□□□ -1.22
NPIPB3-203ENST00000504841 CYB561D2O14569 222 aa7.44□□□□□ -1.22
NPIPB3-203ENST00000504841 CDX4O14627 284 aaPredicted RBP7.44□□□□□ -1.22
NPIPB3-203ENST00000504841 OGTO15294 1046 aa7.44□□□□□ -1.22
NPIPB3-203ENST00000504841 F11P03951 625 aa7.44□□□□□ -1.22
NPIPB3-203ENST00000504841 HMGA1P17096 107 aaKnown RBP7.44□□□□□ -1.22
NPIPB3-203ENST00000504841 CSRP1P21291 193 aaKnown RBP7.44□□□□□ -1.22
NPIPB3-203ENST00000504841 WEE1P30291 646 aa7.44□□□□□ -1.22
NPIPB3-203ENST00000504841 TMEM132DQ14C87 1099 aa7.44□□□□□ -1.22
NPIPB3-203ENST00000504841 KYAT1Q16773 422 aa7.44□□□□□ -1.22
NPIPB3-203ENST00000504841 DDR2Q16832 855 aa7.44□□□□□ -1.22
NPIPB3-203ENST00000504841 TRIM61Q5EBN2 209 aa7.44□□□□□ -1.22
NPIPB3-203ENST00000504841 WSCD1Q658N2 575 aa7.44□□□□□ -1.22
NPIPB3-203ENST00000504841 LRRTM3Q86VH5 581 aa7.44□□□□□ -1.22
NPIPB3-203ENST00000504841 MON1AQ86VX9 555 aa7.44□□□□□ -1.22
NPIPB3-203ENST00000504841 C4orf32Q8N8J7 132 aa7.44□□□□□ -1.22
NPIPB3-203ENST00000504841 IGSF22Q8N9C0 903 aa7.44□□□□□ -1.22
NPIPB3-203ENST00000504841 FAM184AQ8NB25 1140 aa7.44□□□□□ -1.22
NPIPB3-203ENST00000504841 MDGA1Q8NFP4 955 aa7.44□□□□□ -1.22
NPIPB3-203ENST00000504841 SPPL2BQ8TCT7 592 aa7.44□□□□□ -1.22
NPIPB3-203ENST00000504841 RLN3Q8WXF3 142 aa7.44□□□□□ -1.22
NPIPB3-203ENST00000504841 ATP2A3Q93084 1043 aa7.44□□□□□ -1.22
NPIPB3-203ENST00000504841 CDK5RAP3Q96JB5 506 aa7.44□□□□□ -1.22
NPIPB3-203ENST00000504841 MSTO1Q9BUK6 570 aa7.44□□□□□ -1.22
NPIPB3-203ENST00000504841 TIPINQ9BVW5 301 aa7.44□□□□□ -1.22
NPIPB3-203ENST00000504841 ZHX3Q9H4I2 956 aa7.44□□□□□ -1.22
NPIPB3-203ENST00000504841 SLC32A1Q9H598 525 aa7.44□□□□□ -1.22
NPIPB3-203ENST00000504841 FSCN3Q9NQT6 498 aa7.44□□□□□ -1.22
NPIPB3-203ENST00000504841 TMLHEQ9NVH6 421 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms