RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 RPL34P49207 117 aaKnown RBP11.04□□□□□ -0.64
TPM3-217ENST00000504663 GSCP56915 257 aaPredicted RBP11.04□□□□□ -0.64
TPM3-217ENST00000504663 KIF5AQ12840 1032 aa11.04□□□□□ -0.64
TPM3-217ENST00000504663 CNGA2Q16280 664 aa11.04□□□□□ -0.64
TPM3-217ENST00000504663 C2CD6Q53TS8 623 aa11.04□□□□□ -0.64
TPM3-217ENST00000504663 PPP1R15BQ5SWA1 713 aa11.04□□□□□ -0.64
TPM3-217ENST00000504663 PPP1R26Q5T8A7 1209 aaPredicted RBP11.04□□□□□ -0.64
TPM3-217ENST00000504663 DCLRE1AQ6PJP8 1040 aa11.04□□□□□ -0.64
TPM3-217ENST00000504663 SYT10Q6XYQ8 523 aa11.04□□□□□ -0.64
TPM3-217ENST00000504663 ACOT1Q86TX2 421 aa11.04□□□□□ -0.64
TPM3-217ENST00000504663 RNF168Q8IYW5 571 aaPredicted RBP11.04□□□□□ -0.64
TPM3-217ENST00000504663 APPL2Q8NEU8 664 aa11.04□□□□□ -0.64
TPM3-217ENST00000504663 TPCN2Q8NHX9 752 aa11.04□□□□□ -0.64
TPM3-217ENST00000504663 SPATA18Q8TC71 538 aa11.04□□□□□ -0.64
TPM3-217ENST00000504663 URGCPQ8TCY9 931 aa11.04□□□□□ -0.64
TPM3-217ENST00000504663 HASPINQ8TF76 798 aa11.04□□□□□ -0.64
TPM3-217ENST00000504663 CPA5Q8WXQ8 436 aa11.04□□□□□ -0.64
TPM3-217ENST00000504663 RFFLQ8WZ73 363 aa11.04□□□□□ -0.64
TPM3-217ENST00000504663 TOP1MTQ969P6 601 aa11.04□□□□□ -0.64
TPM3-217ENST00000504663 VN1R3Q9BXE9 311 aa11.04□□□□□ -0.64
TPM3-217ENST00000504663 ABCB6Q9NP58 842 aa11.04□□□□□ -0.64
TPM3-217ENST00000504663 AVENQ9NQS1 362 aaPredicted RBP11.04□□□□□ -0.64
TPM3-217ENST00000504663 TMEM30AQ9NV96 361 aa11.04□□□□□ -0.64
TPM3-217ENST00000504663 MYO1AQ9UBC5 1043 aa11.04□□□□□ -0.64
TPM3-217ENST00000504663 CHORDC1Q9UHD1 332 aaPredicted RBP11.04□□□□□ -0.64
TPM3-217ENST00000504663 TSPAN16Q9UKR8 245 aa11.04□□□□□ -0.64
TPM3-217ENST00000504663 PCDHB7Q9Y5E2 793 aa11.04□□□□□ -0.64
TPM3-217ENST00000504663 TIMM13Q9Y5L4 95 aaPredicted RBP11.04□□□□□ -0.64
TPM3-217ENST00000504663 TBKBP1A7MCY6 615 aa11.03□□□□□ -0.64
TPM3-217ENST00000504663 NRP1O14786 923 aa11.03□□□□□ -0.64
TPM3-217ENST00000504663 HOXA2O43364 376 aa11.03□□□□□ -0.64
TPM3-217ENST00000504663 HUS1O60921 280 aa11.03□□□□□ -0.64
TPM3-217ENST00000504663 ATP2C2O75185 946 aa11.03□□□□□ -0.64
TPM3-217ENST00000504663 B3GAT3O94766 335 aa11.03□□□□□ -0.64
TPM3-217ENST00000504663 CLSTN1O94985 981 aa11.03□□□□□ -0.64
TPM3-217ENST00000504663 IPO7O95373 1038 aaKnown RBP11.03□□□□□ -0.64
TPM3-217ENST00000504663 CCDC130P13994 396 aa11.03□□□□□ -0.64
TPM3-217ENST00000504663 CD19P15391 556 aa11.03□□□□□ -0.64
TPM3-217ENST00000504663 RAG1P15918 1043 aa11.03□□□□□ -0.64
TPM3-217ENST00000504663 TYMPP19971 482 aa11.03□□□□□ -0.64
TPM3-217ENST00000504663 ABCB4P21439 1286 aa11.03□□□□□ -0.64
TPM3-217ENST00000504663 PAX3P23760 479 aa11.03□□□□□ -0.64
TPM3-217ENST00000504663 RRM1P23921 792 aa11.03□□□□□ -0.64
TPM3-217ENST00000504663 ACAT1P24752 427 aaKnown RBP11.03□□□□□ -0.64
TPM3-217ENST00000504663 PSMC1P62191 440 aaKnown RBP11.03□□□□□ -0.64
TPM3-217ENST00000504663 IKBKEQ14164 716 aa11.03□□□□□ -0.64
TPM3-217ENST00000504663 GOLGA7BQ2TAP0 167 aa11.03□□□□□ -0.64
TPM3-217ENST00000504663 SGO2Q562F6 1265 aa11.03□□□□□ -0.64
TPM3-217ENST00000504663 ZNF569Q5MCW4 686 aa11.03□□□□□ -0.64
TPM3-217ENST00000504663 PLEKHA7Q6IQ23 1121 aa11.03□□□□□ -0.64
TPM3-217ENST00000504663 SLFN11Q7Z7L1 901 aa11.03□□□□□ -0.64
TPM3-217ENST00000504663 CPNE8Q86YQ8 564 aa11.03□□□□□ -0.64
TPM3-217ENST00000504663 FUKQ8N0W3 1084 aa11.03□□□□□ -0.64
TPM3-217ENST00000504663 TMEM86AQ8N2M4 240 aa11.03□□□□□ -0.64
TPM3-217ENST00000504663 LRRC43Q8N309 656 aa11.03□□□□□ -0.64
TPM3-217ENST00000504663 RNF10Q8N5U6 811 aaKnown RBP11.03□□□□□ -0.64
TPM3-217ENST00000504663 OR6B3Q8NGW1 331 aa11.03□□□□□ -0.64
TPM3-217ENST00000504663 OR10T2Q8NGX3 314 aa11.03□□□□□ -0.64
TPM3-217ENST00000504663 BADQ92934 168 aa11.03□□□□□ -0.64
TPM3-217ENST00000504663 SECISBP2LQ93073 1101 aaKnown RBP11.03□□□□□ -0.64
TPM3-217ENST00000504663 C11orf70Q9BRQ4 267 aa11.03□□□□□ -0.64
TPM3-217ENST00000504663 TMEM175Q9BSA9 504 aa11.03□□□□□ -0.64
TPM3-217ENST00000504663 FAM49BQ9NUQ9 324 aa11.03□□□□□ -0.64
TPM3-217ENST00000504663 SEPT11Q9NVA2 429 aaKnown RBP11.03□□□□□ -0.64
TPM3-217ENST00000504663 KANSL3Q9P2N6 904 aa11.03□□□□□ -0.64
TPM3-217ENST00000504663 PRG3Q9Y2Y8 225 aaPredicted RBP11.03□□□□□ -0.64
TPM3-217ENST00000504663 GBF1Q92538 1859 aa11.03□□□□□ -0.64
TPM3-217ENST00000504663 PLXNA4Q9HCM2 1894 aa11.02□□□□□ -0.64
TPM3-217ENST00000504663 A8MXQ7 604 aa11.02□□□□□ -0.65
TPM3-217ENST00000504663 KIF2AO00139 706 aaPredicted RBP11.02□□□□□ -0.65
TPM3-217ENST00000504663 KIF5CO60282 957 aa11.02□□□□□ -0.65
TPM3-217ENST00000504663 BAIAP3O94812 1187 aa11.02□□□□□ -0.65
TPM3-217ENST00000504663 ATP1A1P05023 1023 aaKnown RBP11.02□□□□□ -0.65
TPM3-217ENST00000504663 GALTP07902 379 aa11.02□□□□□ -0.65
TPM3-217ENST00000504663 PDGFRBP09619 1106 aa11.02□□□□□ -0.65
TPM3-217ENST00000504663 ODC1P11926 461 aa11.02□□□□□ -0.65
TPM3-217ENST00000504663 GNL1P36915 607 aaPredicted RBP11.02□□□□□ -0.65
TPM3-217ENST00000504663 PBX3P40426 434 aa11.02□□□□□ -0.65
TPM3-217ENST00000504663 GABRB2P47870 512 aa11.02□□□□□ -0.65
TPM3-217ENST00000504663 CACNA2D1P54289 1103 aa11.02□□□□□ -0.65
TPM3-217ENST00000504663 GNG11P61952 73 aa11.02□□□□□ -0.65
TPM3-217ENST00000504663 ZNF252P-AS1Q0IIN9 211 aa11.02□□□□□ -0.65
TPM3-217ENST00000504663 PDCLQ13371 301 aa11.02□□□□□ -0.65
TPM3-217ENST00000504663 MRPL58Q14197 206 aaKnown RBP11.02□□□□□ -0.65
TPM3-217ENST00000504663 TMEM240Q5SV17 173 aa11.02□□□□□ -0.65
TPM3-217ENST00000504663 FAM171BQ6P995 826 aa11.02□□□□□ -0.65
TPM3-217ENST00000504663 MMS22LQ6ZRQ5 1243 aa11.02□□□□□ -0.65
TPM3-217ENST00000504663 TMEM199Q8N511 208 aa11.02□□□□□ -0.65
TPM3-217ENST00000504663 B3GALNT2Q8NCR0 500 aa11.02□□□□□ -0.65
TPM3-217ENST00000504663 SLC35G2Q8TBE7 412 aa11.02□□□□□ -0.65
TPM3-217ENST00000504663 SLC35F5Q8WV83 523 aa11.02□□□□□ -0.65
TPM3-217ENST00000504663 ZNF653Q96CK0 615 aa11.02□□□□□ -0.65
TPM3-217ENST00000504663 TMEM209Q96SK2 561 aa11.02□□□□□ -0.65
TPM3-217ENST00000504663 CPXM1Q96SM3 734 aa11.02□□□□□ -0.65
TPM3-217ENST00000504663 SYT15Q9BQS2 421 aa11.02□□□□□ -0.65
TPM3-217ENST00000504663 MRPL9Q9BYD2 267 aaKnown RBP11.02□□□□□ -0.65
TPM3-217ENST00000504663 B3GNT5Q9BYG0 378 aa11.02□□□□□ -0.65
TPM3-217ENST00000504663 GPR62Q9BZJ7 368 aa11.02□□□□□ -0.65
TPM3-217ENST00000504663 TRIM7Q9C029 511 aa11.02□□□□□ -0.65
TPM3-217ENST00000504663 ZNF518BQ9C0D4 1074 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms