RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 ZNF606Q8WXB4 792 aa14.72□□□□□ -0.05
CYSTM1-202ENST00000504227 ARNTL2Q8WYA1 636 aa14.72□□□□□ -0.05
CYSTM1-202ENST00000504227 TFAP2BQ92481 460 aa14.72□□□□□ -0.05
CYSTM1-202ENST00000504227 BAG1Q99933 345 aaPredicted RBP14.72□□□□□ -0.05
CYSTM1-202ENST00000504227 AGPAT1Q99943 283 aa14.72□□□□□ -0.05
CYSTM1-202ENST00000504227 ZCWPW1Q9H0M4 648 aa14.72□□□□□ -0.05
CYSTM1-202ENST00000504227 ZBP1Q9H171 429 aa14.72□□□□□ -0.05
CYSTM1-202ENST00000504227 PDCL3Q9H2J4 239 aa14.72□□□□□ -0.05
CYSTM1-202ENST00000504227 HAUS4Q9H6D7 363 aa14.72□□□□□ -0.05
CYSTM1-202ENST00000504227 CERS4Q9HA82 394 aa14.72□□□□□ -0.05
CYSTM1-202ENST00000504227 ACP6Q9NPH0 428 aa14.72□□□□□ -0.05
CYSTM1-202ENST00000504227 TLR9Q9NR96 1032 aa14.72□□□□□ -0.05
CYSTM1-202ENST00000504227 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.72□□□□□ -0.05
CYSTM1-202ENST00000504227 KIAA1671Q9BY89 1806 aa14.71□□□□□ -0.05
CYSTM1-202ENST00000504227 MYBPHLA2RUH7 354 aa14.71□□□□□ -0.05
CYSTM1-202ENST00000504227 TBC1D4O60343 1298 aa14.71□□□□□ -0.05
CYSTM1-202ENST00000504227 TNFAIP3P21580 790 aa14.71□□□□□ -0.05
CYSTM1-202ENST00000504227 BRD2P25440 801 aaKnown RBP14.71□□□□□ -0.05
CYSTM1-202ENST00000504227 ARPP19P56211 112 aa14.71□□□□□ -0.05
CYSTM1-202ENST00000504227 CDR2Q01850 454 aa14.71□□□□□ -0.05
CYSTM1-202ENST00000504227 SMARCB1Q12824 385 aa14.71□□□□□ -0.05
CYSTM1-202ENST00000504227 CNGA2Q16280 664 aa14.71□□□□□ -0.05
CYSTM1-202ENST00000504227 PRPF38BQ5VTL8 546 aaKnown RBP14.71□□□□□ -0.05
CYSTM1-202ENST00000504227 TAF3Q5VWG9 929 aa14.71□□□□□ -0.05
CYSTM1-202ENST00000504227 HGSNATQ68CP4 663 aa14.71□□□□□ -0.05
CYSTM1-202ENST00000504227 ARHGAP17Q68EM7 881 aa14.71□□□□□ -0.05
CYSTM1-202ENST00000504227 PDE12Q6L8Q7 609 aaKnown RBP14.71□□□□□ -0.05
CYSTM1-202ENST00000504227 FAM171BQ6P995 826 aa14.71□□□□□ -0.05
CYSTM1-202ENST00000504227 NOP9Q86U38 636 aaKnown RBP14.71□□□□□ -0.05
CYSTM1-202ENST00000504227 LRRC8AQ8IWT6 810 aa14.71□□□□□ -0.05
CYSTM1-202ENST00000504227 C12orf29Q8N999 325 aa14.71□□□□□ -0.05
CYSTM1-202ENST00000504227 CCDC112Q8NEF3 446 aa14.71□□□□□ -0.05
CYSTM1-202ENST00000504227 EPS8L1Q8TE68 723 aa14.71□□□□□ -0.05
CYSTM1-202ENST00000504227 CYFIP2Q96F07 1278 aa14.71□□□□□ -0.05
CYSTM1-202ENST00000504227 CCDC42Q96M95 316 aa14.71□□□□□ -0.05
CYSTM1-202ENST00000504227 TCF25Q9BQ70 676 aa14.71□□□□□ -0.05
CYSTM1-202ENST00000504227 LPIN3Q9BQK8 851 aa14.71□□□□□ -0.05
CYSTM1-202ENST00000504227 MED10Q9BTT4 135 aa14.71□□□□□ -0.05
CYSTM1-202ENST00000504227 NGRNQ9NPE2 291 aaKnown RBP14.71□□□□□ -0.05
CYSTM1-202ENST00000504227 CRTAC1Q9NQ79 661 aa14.71□□□□□ -0.05
CYSTM1-202ENST00000504227 ENTPD7Q9NQZ7 604 aa14.71□□□□□ -0.05
CYSTM1-202ENST00000504227 FAM49BQ9NUQ9 324 aa14.71□□□□□ -0.05
CYSTM1-202ENST00000504227 FNIP2Q9P278 1114 aa14.71□□□□□ -0.05
CYSTM1-202ENST00000504227 NOCTQ9UK39 431 aaKnown RBP14.71□□□□□ -0.05
CYSTM1-202ENST00000504227 GTF3C4Q9UKN8 822 aa14.71□□□□□ -0.05
CYSTM1-202ENST00000504227 MYO9BQ13459 2157 aa14.71□□□□□ -0.05
CYSTM1-202ENST00000504227 ATP8B3O60423 1300 aa14.7□□□□□ -0.06
CYSTM1-202ENST00000504227 GBF1Q92538 1859 aa14.7□□□□□ -0.06
CYSTM1-202ENST00000504227 SSU72P8A0A1W2PR75 194 aa14.7□□□□□ -0.06
CYSTM1-202ENST00000504227 GRM6O15303 877 aa14.7□□□□□ -0.06
CYSTM1-202ENST00000504227 CPB1P15086 417 aa14.7□□□□□ -0.06
CYSTM1-202ENST00000504227 FECHP22830 423 aa14.7□□□□□ -0.06
CYSTM1-202ENST00000504227 ANXA13P27216 316 aa14.7□□□□□ -0.06
CYSTM1-202ENST00000504227 OR1D2P34982 312 aa14.7□□□□□ -0.06
CYSTM1-202ENST00000504227 EIF4A3P38919 411 aaKnown RBP14.7□□□□□ -0.06
CYSTM1-202ENST00000504227 ERVFC1P60507 584 aa14.7□□□□□ -0.06
CYSTM1-202ENST00000504227 MAPK8IP2Q13387 824 aaPredicted RBP14.7□□□□□ -0.06
CYSTM1-202ENST00000504227 SMC1AQ14683 1233 aaKnown RBP14.7□□□□□ -0.06
CYSTM1-202ENST00000504227 PTPN14Q15678 1187 aa14.7□□□□□ -0.06
CYSTM1-202ENST00000504227 NFE2Q16621 373 aaPredicted RBP14.7□□□□□ -0.06
CYSTM1-202ENST00000504227 SLC39A12Q504Y0 691 aa14.7□□□□□ -0.06
CYSTM1-202ENST00000504227 SLC8B1Q6J4K2 584 aa14.7□□□□□ -0.06
CYSTM1-202ENST00000504227 LCLAT1Q6UWP7 414 aa14.7□□□□□ -0.06
CYSTM1-202ENST00000504227 C4orf50Q6ZRC1 276 aa14.7□□□□□ -0.06
CYSTM1-202ENST00000504227 ZNF571Q7Z3V5 609 aaPredicted RBP14.7□□□□□ -0.06
CYSTM1-202ENST00000504227 LRRTM3Q86VH5 581 aa14.7□□□□□ -0.06
CYSTM1-202ENST00000504227 SPATA2LQ8IUW3 424 aaPredicted RBP14.7□□□□□ -0.06
CYSTM1-202ENST00000504227 SLC20A1Q8WUM9 679 aa14.7□□□□□ -0.06
CYSTM1-202ENST00000504227 AUTS2Q8WXX7 1259 aa14.7□□□□□ -0.06
CYSTM1-202ENST00000504227 DDX1Q92499 740 aaKnown RBP14.7□□□□□ -0.06
CYSTM1-202ENST00000504227 TMEM209Q96SK2 561 aa14.7□□□□□ -0.06
CYSTM1-202ENST00000504227 CHP1Q99653 195 aa14.7□□□□□ -0.06
CYSTM1-202ENST00000504227 HNRNPABQ99729 332 aaKnown RBP14.7□□□□□ -0.06
CYSTM1-202ENST00000504227 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.7□□□□□ -0.06
CYSTM1-202ENST00000504227 DEF6Q9H4E7 631 aa14.7□□□□□ -0.06
CYSTM1-202ENST00000504227 NHEJ1Q9H9Q4 299 aaPredicted RBP14.7□□□□□ -0.06
CYSTM1-202ENST00000504227 RXFP1Q9HBX9 757 aa14.7□□□□□ -0.06
CYSTM1-202ENST00000504227 SEPT11Q9NVA2 429 aaKnown RBP14.7□□□□□ -0.06
CYSTM1-202ENST00000504227 ARHGAP20Q9P2F6 1191 aa14.7□□□□□ -0.06
CYSTM1-202ENST00000504227 HESX1Q9UBX0 185 aa14.7□□□□□ -0.06
CYSTM1-202ENST00000504227 CDY1Q9Y6F8 540 aa14.7□□□□□ -0.06
CYSTM1-202ENST00000504227 VWA8A3KMH1 1905 aa14.7□□□□□ -0.06
CYSTM1-202ENST00000504227 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.69□□□□□ -0.06
CYSTM1-202ENST00000504227 O00370 1275 aa14.69□□□□□ -0.06
CYSTM1-202ENST00000504227 LILRB3O75022 631 aa14.69□□□□□ -0.06
CYSTM1-202ENST00000504227 MMEP08473 750 aa14.69□□□□□ -0.06
CYSTM1-202ENST00000504227 PLEKP08567 350 aaPredicted RBP14.69□□□□□ -0.06
CYSTM1-202ENST00000504227 OR4Q2P0C623 313 aa14.69□□□□□ -0.06
CYSTM1-202ENST00000504227 CCDC130P13994 396 aa14.69□□□□□ -0.06
CYSTM1-202ENST00000504227 CHRNB2P17787 502 aa14.69□□□□□ -0.06
CYSTM1-202ENST00000504227 RPL17P18621 184 aaKnown RBP14.69□□□□□ -0.06
CYSTM1-202ENST00000504227 DNAJB1P25685 340 aa14.69□□□□□ -0.06
CYSTM1-202ENST00000504227 ADORA2BP29275 332 aa14.69□□□□□ -0.06
CYSTM1-202ENST00000504227 NDUFV1P49821 464 aa14.69□□□□□ -0.06
CYSTM1-202ENST00000504227 CYP27A1Q02318 531 aa14.69□□□□□ -0.06
CYSTM1-202ENST00000504227 GPR17Q13304 367 aa14.69□□□□□ -0.06
CYSTM1-202ENST00000504227 PPP1R26Q5T8A7 1209 aaPredicted RBP14.69□□□□□ -0.06
CYSTM1-202ENST00000504227 RSPO2Q6UXX9 243 aaPredicted RBP14.69□□□□□ -0.06
CYSTM1-202ENST00000504227 TRIM72Q6ZMU5 477 aa14.69□□□□□ -0.06
CYSTM1-202ENST00000504227 CCDC170Q8IYT3 715 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms