RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 TTC30AQ86WT1 665 aa7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 CRYBG2Q8N1P7 616 aa7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 APPL2Q8NEU8 664 aa7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 OR6B3Q8NGW1 331 aa7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 HASPINQ8TF76 798 aa7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 CTNNBL1Q8WYA6 563 aaPredicted RBP7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 BTBD6Q96KE9 485 aa7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 NOX5Q96PH1 765 aa7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 PKMYT1Q99640 499 aa7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 NAPGQ99747 312 aaPredicted RBP7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 C11orf70Q9BRQ4 267 aa7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 NT5C1AQ9BXI3 368 aa7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 LHX5Q9H2C1 402 aa7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 ABCB6Q9NP58 842 aa7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 LUC7LQ9NQ29 371 aaKnown RBP7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 AVENQ9NQS1 362 aaPredicted RBP7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 PRDM10Q9NQV6 1147 aa7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 FAM49BQ9NUQ9 324 aa7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 TMEM39AQ9NV64 488 aa7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 CNOT8Q9UFF9 292 aaKnown RBP7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 R3HCC1Q9Y3T6 440 aaKnown RBP7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 TIMM13Q9Y5L4 95 aaPredicted RBP7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 MRFAP1Q9Y605 127 aa7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 CTAGE9A4FU28 777 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 A8MXQ7 604 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 TMEM189-UBE2V1I3L0A0 370 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 HUS1O60921 280 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 SRGAP2O75044 1071 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 B3GAT3O94766 335 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 PARNO95453 639 aaKnown RBP7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 TIMP1P01033 207 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 ERBB2P04626 1255 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 CYP11A1P05108 521 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 PDGFRBP09619 1106 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 CCDC130P13994 396 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 CSF2RAP15509 400 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 GNL1P36915 607 aaPredicted RBP7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 GPD2P43304 727 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 NSFP46459 744 aaKnown RBP7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 PSMC1P62191 440 aaKnown RBP7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 DEFB103AP81534 67 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 ZNF252P-AS1Q0IIN9 211 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 PDCLQ13371 301 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 PTPROQ16827 1216 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 GOLGA7BQ2TAP0 167 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 SGO2Q562F6 1265 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 PPP1R15BQ5SWA1 713 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 CYP4A22Q5TCH4 519 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 MEI1Q5TIA1 1274 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 PLEKHA7Q6IQ23 1121 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 CNKSR3Q6P9H4 555 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 PAQR9Q6ZVX9 377 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 DPH6Q7L8W6 267 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 NECAB2Q7Z6G3 386 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 TMCO2Q7Z6W1 182 aaPredicted RBP7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 NT5DC3Q86UY8 548 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 TMEM173Q86WV6 379 aaPredicted RBP7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 NPAS4Q8IUM7 802 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 FUKQ8N0W3 1084 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 TXLNBQ8N3L3 684 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 TTC39CQ8N584 583 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 TMEM35BQ8NCS4 154 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 TRIM58Q8NG06 486 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 UBA3Q8TBC4 463 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 BCL7CQ8WUZ0 217 aaPredicted RBP7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 RSPH1Q8WYR4 309 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 DDX27Q96GQ7 796 aaKnown RBP7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 SUSD3Q96L08 255 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 HEXIM2Q96MH2 286 aaKnown RBP7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 UROC1Q96N76 676 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 CPXM1Q96SM3 734 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 NUP85Q9BW27 656 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 NRDE2Q9H7Z3 1164 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 RC3H2Q9HBD1 1191 aaKnown RBP7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 CRTAC1Q9NQ79 661 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 PRDM5Q9NQX1 630 aaPredicted RBP7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 TMEM30AQ9NV96 361 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 MARCH5Q9NX47 278 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 TSPAN16Q9UKR8 245 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 PACSIN2Q9UNF0 486 aaPredicted RBP7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 HYOU1Q9Y4L1 999 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 GREB1Q4ZG55 1949 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 MYO16Q9Y6X6 1858 aa7.32□□□□□ -1.24
TOPBP1-203ENST00000503464 M0QYV0 167 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 PDE2AO00408 941 aaPredicted RBP7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 ZNF185O15231 689 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 DDX3YO15523 660 aaKnown RBP7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 MED7O43513 233 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 URI1O94763 535 aaPredicted RBP7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 EFEMP2O95967 443 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 FAM163BP0C2L3 166 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 MYBL1P10243 752 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 PTPN1P18031 435 aaKnown RBP7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 RFC2P35250 354 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 PBX3P40426 434 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 NOP2P46087 812 aaKnown RBP7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 MARCKSL1P49006 195 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 SLC11A1P49279 550 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 PLXNA3P51805 1871 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 CDR1P51861 262 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms