RNA–Protein interactions for RNA: ENST00000498761.5

ARHGEF9-208, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 2

Gene ARHGEF9, Length 515 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-208	ENST00000498761	PRDM12	Q9H4Q4	367 aa		4.88	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	ZNF768	Q9H5H4	540 aa	Known RBP	4.88	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	SAMD15	Q9P1V8	674 aa		4.88	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	THEG	Q9P2T0	379 aa		4.88	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	DDX20	Q9UHI6	824 aa	Known RBP	4.88	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	MAST3	O60307	1309 aa		4.88	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	MROH5	Q6ZUA9	1318 aa		4.88	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	RFX7	Q2KHR2	1363 aa		4.88	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	XIRP2	A4UGR9	3374 aa		4.88	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	LTBP2	Q14767	1821 aa		4.88	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	REV3L	O60673	3130 aa		4.87	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	DNM1L	O00429	736 aa		4.87	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	B3GALT2	O43825	422 aa		4.87	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	ENTPD3	O75355	529 aa		4.87	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	NPTXR	O95502	500 aa		4.87	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	NBPF7	P0C2Y1	421 aa	Predicted RBP	4.87	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	CDK4	P11802	303 aa		4.87	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	CYP2C19	P33261	490 aa		4.87	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	RGS2	P41220	211 aa		4.87	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	ADCYAP1R1	P41586	468 aa		4.87	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	KIF11	P52732	1056 aa		4.87	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	IRX3	P78415	501 aa	Predicted RBP	4.87	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	MRPS5	P82675	430 aa	Known RBP	4.87	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	SLC6A3	Q01959	620 aa		4.87	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	TFF2	Q03403	129 aa		4.87	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	TLE2	Q04725	743 aa		4.87	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	RALBP1	Q15311	655 aa		4.87	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	GPR142	Q7Z601	462 aa		4.87	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	ANKRD44	Q8N8A2	993 aa		4.87	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	CHST14	Q8NCH0	376 aa		4.87	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	OR5AN1	Q8NGI8	311 aa		4.87	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	WDR66	Q8TBY9	1149 aa		4.87	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	SOCS4	Q8WXH5	440 aa		4.87	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	LPAR1	Q92633	364 aa		4.87	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	TIFA	Q96CG3	184 aa		4.87	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	SNX27	Q96L92	541 aa		4.87	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	C16orf92	Q96LL3	132 aa		4.87	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	PAGR1	Q9BTK6	254 aa		4.87	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	SLC6A15	Q9H2J7	730 aa		4.87	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	TOR3A	Q9H497	397 aa		4.87	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	RSAD1	Q9HA92	442 aa		4.87	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	MUC6	Q6W4X9	2439 aa		4.87	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	CHD7	Q9P2D1	2997 aa		4.87	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	PTPRF	P10586	1907 aa		4.87	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	MAST2	Q6P0Q8	1798 aa		4.86	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	PHIP	Q8WWQ0	1821 aa		4.86	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	CCDC163	A0A0D9SF12	145 aa		4.86	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	HIP1R	O75146	1068 aa		4.86	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	CNMD	O75829	334 aa		4.86	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	IFIT1	P09914	478 aa	Known RBP	4.86	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	MAPK4	P31152	587 aa		4.86	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	ZEB1	P37275	1124 aa	Predicted RBP	4.86	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	KRTAP10-7	P60409	375 aa	Predicted RBP	4.86	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	CALD1	Q05682	793 aa	Known RBP	4.86	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	PABPC4	Q13310	644 aa	Known RBP eCLIP	4.86	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	MYBPC3	Q14896	1274 aa		4.86	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	PUM3	Q15397	648 aa	Known RBP	4.86	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	PRAMEF19	Q5SWL8	479 aa		4.86	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	FKBP15	Q5T1M5	1219 aa		4.86	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	LCE1A	Q5T7P2	110 aa		4.86	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	SLC4A10	Q6U841	1118 aa		4.86	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	EDC3	Q96F86	508 aa	Known RBP	4.86	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	C1QTNF1	Q9BXJ1	281 aa		4.86	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	CHMP4A	Q9BY43	222 aa		4.86	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	BICC1	Q9H694	974 aa	Known RBP	4.86	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	4.86	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	C9orf78	Q9NZ63	289 aa	Predicted RBP	4.86	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	H2AFY2	Q9P0M6	372 aa	Predicted RBP	4.86	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	SORCS3	Q9UPU3	1222 aa		4.86	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	COX11	Q9Y6N1	276 aa		4.86	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	GAK	O14976	1311 aa		4.86	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	MYBBP1A	Q9BQG0	1328 aa	Known RBP	4.86	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	AK9	Q5TCS8	1911 aa		4.85	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	4.85	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	4.85	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	PTPDC1	A2A3K4	754 aa		4.85	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	CBX4	O00257	560 aa		4.85	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	CYBA	P13498	195 aa		4.85	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	ADORA1	P30542	326 aa		4.85	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	HOXA7	P31268	230 aa	Predicted RBP	4.85	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	IGFALS	P35858	605 aa		4.85	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	BTD	P43251	543 aa		4.85	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	PHKA1	P46020	1223 aa		4.85	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	FNTB	P49356	437 aa		4.85	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	BACE1	P56817	501 aa		4.85	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	RHBDL3	P58872	404 aa		4.85	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	RABL6	Q3YEC7	729 aa	Predicted RBP	4.85	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	AKNAD1	Q5T1N1	836 aa		4.85	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	WDR78	Q5VTH9	848 aa		4.85	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	MFSD14C	Q5VZR4	134 aa		4.85	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	KLHDC10	Q6PID8	442 aa		4.85	□□□□□ -1.63
ARHGEF9-208	ENST00000498761		Q6YL49	198 aa		4.85	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	HTR3D	Q70Z44	454 aa		4.85	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	CCAR1	Q8IX12	1150 aa	Known RBP	4.85	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	CPT1C	Q8TCG5	803 aa		4.85	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	CALML6	Q8TD86	181 aa		4.85	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	ZNF384	Q8TF68	577 aa		4.85	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	4.85	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	TCF25	Q9BQ70	676 aa		4.85	□□□□□ -1.63
ARHGEF9-208	ENST00000498761	HAPLN2	Q9GZV7	340 aa		4.85	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms