RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 RALYQ9UKM9 306 aaKnown RBP5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 COG5Q9UP83 839 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 GDAQ9Y2T3 454 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 COL4A3BPQ9Y5P4 624 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 CORINQ9Y5Q5 1042 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 MTCH2Q9Y6C9 303 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 A0A0G2JMZ2 1700 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 ZDBF2Q9HCK1 2354 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 PLXNB2O15031 1838 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 ARHGEF35A5YM69 484 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 ASB14A6NK59 587 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 STRNO43815 780 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 TBCAO75347 108 aaKnown RBP5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 LYPLA2O95372 231 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 ALADP13716 330 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 ICAM3P32942 547 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 ID4P47928 161 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 SLURP1P55000 103 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 SLC12A3P55017 1021 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 GSDMDP57764 484 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 PSMC5P62195 406 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 PSMC6P62333 389 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 TLE2Q04725 743 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 TMEM62Q0P6H9 643 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 STK4Q13043 487 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 COASYQ13057 564 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 ITGB3BPQ13352 177 aaPredicted RBP5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 GIT2Q14161 759 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 NEDD9Q14511 834 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 FAM26FQ5R3K3 315 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 UBXN11Q5T124 520 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 ZFYVE27Q5T4F4 411 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 WDR78Q5VTH9 848 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 CENPPQ6IPU0 288 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 MIS18BP1Q6P0N0 1132 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 FOXR2Q6PJQ5 311 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 STXBP4Q6ZWJ1 553 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 MTERF4Q7Z6M4 381 aaKnown RBP5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 FAM178BQ8IXR5 827 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 C4orf19Q8IY42 314 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 FAM133AQ8N9E0 248 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 SPC24Q8NBT2 197 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 USP6NLQ92738 828 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 P2RX5Q93086 422 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 CRELD1Q96HD1 420 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 PLCD4Q9BRC7 762 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 TIPINQ9BVW5 301 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 SRRTQ9BXP5 876 aaKnown RBP5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 FOXP3Q9BZS1 431 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 XPO4Q9C0E2 1151 aaKnown RBP5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 BHMT2Q9H2M3 363 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 ZHX3Q9H4I2 956 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 THAP9Q9H5L6 903 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 SLC39A2Q9NP94 309 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 SAMSN1Q9NSI8 373 aaKnown RBP5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 ANKEF1Q9NU02 776 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 FLRT1Q9NZU1 646 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 MORF4L1Q9UBU8 362 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 SEL1LQ9UBV2 794 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 SLC9A2Q9UBY0 812 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 DDX20Q9UHI6 824 aaKnown RBP5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 DBR1Q9UK59 544 aaKnown RBP5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 ODF2LQ9ULJ1 636 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 GNEQ9Y223 722 aaKnown RBP5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 PCDHA10Q9Y5I2 948 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 IVNS1ABPQ9Y6Y0 642 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 MYO15AQ9UKN7 3530 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 LOXHD1Q8IVV2 1947 aa5.81□□□□□ -1.48
HMGXB4-208ENST00000498325 CHD7Q9P2D1 2997 aa5.8□□□□□ -1.48
HMGXB4-208ENST00000498325 SSU72P8A0A1W2PR75 194 aa5.8□□□□□ -1.48
HMGXB4-208ENST00000498325 FRMD3A2A2Y4 597 aa5.8□□□□□ -1.48
HMGXB4-208ENST00000498325 KCNJ18B7U540 433 aa5.8□□□□□ -1.48
HMGXB4-208ENST00000498325 FFAR3O14843 346 aa5.8□□□□□ -1.48
HMGXB4-208ENST00000498325 KIAA0355O15063 1070 aa5.8□□□□□ -1.48
HMGXB4-208ENST00000498325 BUB1BO60566 1050 aaPredicted RBP5.8□□□□□ -1.48
HMGXB4-208ENST00000498325 ATP9AO75110 1047 aa5.8□□□□□ -1.48
HMGXB4-208ENST00000498325 ATP1A3P13637 1013 aa5.8□□□□□ -1.48
HMGXB4-208ENST00000498325 MYOGP15173 224 aa5.8□□□□□ -1.48
HMGXB4-208ENST00000498325 RAG1P15918 1043 aa5.8□□□□□ -1.48
HMGXB4-208ENST00000498325 KCNA2P16389 499 aa5.8□□□□□ -1.48
HMGXB4-208ENST00000498325 ZNF18P17022 549 aa5.8□□□□□ -1.48
HMGXB4-208ENST00000498325 EDNRBP24530 442 aa5.8□□□□□ -1.48
HMGXB4-208ENST00000498325 EEF1GP26641 437 aaKnown RBP5.8□□□□□ -1.48
HMGXB4-208ENST00000498325 ARL4AP40617 200 aa5.8□□□□□ -1.48
HMGXB4-208ENST00000498325 LIG3P49916 1009 aa5.8□□□□□ -1.48
HMGXB4-208ENST00000498325 ZXDAP98168 799 aa5.8□□□□□ -1.48
HMGXB4-208ENST00000498325 CNTN2Q02246 1040 aa5.8□□□□□ -1.48
HMGXB4-208ENST00000498325 LRRC63Q05C16 580 aa5.8□□□□□ -1.48
HMGXB4-208ENST00000498325 KCNJ12Q14500 433 aa5.8□□□□□ -1.48
HMGXB4-208ENST00000498325 ARSHQ5FYA8 562 aa5.8□□□□□ -1.48
HMGXB4-208ENST00000498325 TMEM240Q5SV17 173 aa5.8□□□□□ -1.48
HMGXB4-208ENST00000498325 ANKRD40Q6AI12 368 aa5.8□□□□□ -1.48
HMGXB4-208ENST00000498325 RINT1Q6NUQ1 792 aa5.8□□□□□ -1.48
HMGXB4-208ENST00000498325 SEPT14Q6ZU15 432 aa5.8□□□□□ -1.48
HMGXB4-208ENST00000498325 C1orf186Q6ZWK4 172 aa5.8□□□□□ -1.48
HMGXB4-208ENST00000498325 ASCL5Q7RTU5 278 aa5.8□□□□□ -1.48
HMGXB4-208ENST00000498325 CCDC186Q7Z3E2 898 aa5.8□□□□□ -1.48
HMGXB4-208ENST00000498325 ZSCAN30Q86W11 494 aa5.8□□□□□ -1.48
HMGXB4-208ENST00000498325 CREBRFQ8IUR6 639 aa5.8□□□□□ -1.48
HMGXB4-208ENST00000498325 ABRAQ8N0Z2 381 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms