RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 SLC2A7Q6PXP3 512 aa5.11□□□□□ -1.59
SMC4-227ENST00000497984 ZNF804AQ7Z570 1209 aa5.11□□□□□ -1.59
SMC4-227ENST00000497984 WDR53Q7Z5U6 358 aaPredicted RBP5.11□□□□□ -1.59
SMC4-227ENST00000497984 USP37Q86T82 979 aa5.11□□□□□ -1.59
SMC4-227ENST00000497984 FANCBQ8NB91 859 aa5.11□□□□□ -1.59
SMC4-227ENST00000497984 C3orf20Q8ND61 904 aa5.11□□□□□ -1.59
SMC4-227ENST00000497984 NELL2Q99435 816 aa5.11□□□□□ -1.59
SMC4-227ENST00000497984 SIK2Q9H0K1 926 aa5.11□□□□□ -1.59
SMC4-227ENST00000497984 TMX1Q9H3N1 280 aa5.11□□□□□ -1.59
SMC4-227ENST00000497984 ZDHHC8Q9ULC8 765 aa5.11□□□□□ -1.59
SMC4-227ENST00000497984 SHTN1A0MZ66 631 aa5.1□□□□□ -1.59
SMC4-227ENST00000497984 GABRDO14764 452 aa5.1□□□□□ -1.59
SMC4-227ENST00000497984 PPEF2O14830 753 aa5.1□□□□□ -1.59
SMC4-227ENST00000497984 NTN1O95631 604 aa5.1□□□□□ -1.59
SMC4-227ENST00000497984 IL6RP08887 468 aaPredicted RBP5.1□□□□□ -1.59
SMC4-227ENST00000497984 HOXB6P17509 224 aaKnown RBP5.1□□□□□ -1.59
SMC4-227ENST00000497984 CLCN2P51788 898 aa5.1□□□□□ -1.59
SMC4-227ENST00000497984 ZNF134P52741 427 aa5.1□□□□□ -1.59
SMC4-227ENST00000497984 EEFSECP57772 596 aaKnown RBP5.1□□□□□ -1.59
SMC4-227ENST00000497984 SP2Q02086 613 aa5.1□□□□□ -1.59
SMC4-227ENST00000497984 MTMR1Q13613 665 aa5.1□□□□□ -1.59
SMC4-227ENST00000497984 ODF1Q14990 250 aa5.1□□□□□ -1.59
SMC4-227ENST00000497984 TMEM108Q6UXF1 575 aa5.1□□□□□ -1.59
SMC4-227ENST00000497984 PRSS22Q9GZN4 317 aa5.1□□□□□ -1.59
SMC4-227ENST00000497984 SPRTNQ9H040 489 aaPredicted RBP5.1□□□□□ -1.59
SMC4-227ENST00000497984 CCDC8Q9H0W5 538 aaPredicted RBP5.1□□□□□ -1.59
SMC4-227ENST00000497984 SH2B3Q9UQQ2 575 aa5.1□□□□□ -1.59
SMC4-227ENST00000497984 POLHQ9Y253 713 aa5.1□□□□□ -1.59
SMC4-227ENST00000497984 ATP8A1Q9Y2Q0 1164 aa5.1□□□□□ -1.59
SMC4-227ENST00000497984 PCDHA3Q9Y5H8 950 aa5.1□□□□□ -1.59
SMC4-227ENST00000497984 MRFAP1Q9Y605 127 aa5.1□□□□□ -1.59
SMC4-227ENST00000497984 M0QYG6 137 aa5.09□□□□□ -1.59
SMC4-227ENST00000497984 SLC16A3O15427 465 aaKnown RBP5.09□□□□□ -1.59
SMC4-227ENST00000497984 TLR5O60602 858 aa5.09□□□□□ -1.59
SMC4-227ENST00000497984 ZRANB2O95218 330 aaKnown RBP eCLIP5.09□□□□□ -1.59
SMC4-227ENST00000497984 ARIH2O95376 493 aa5.09□□□□□ -1.59
SMC4-227ENST00000497984 CYP2C18P33260 490 aa5.09□□□□□ -1.59
SMC4-227ENST00000497984 CYP4F2P78329 520 aa5.09□□□□□ -1.59
SMC4-227ENST00000497984 EGFLAMQ63HQ2 1017 aa5.09□□□□□ -1.59
SMC4-227ENST00000497984 CATSPERGQ6ZRH7 1159 aa5.09□□□□□ -1.59
SMC4-227ENST00000497984 TECPR1Q7Z6L1 1165 aa5.09□□□□□ -1.59
SMC4-227ENST00000497984 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.09□□□□□ -1.59
SMC4-227ENST00000497984 MACROD1Q9BQ69 325 aa5.09□□□□□ -1.59
SMC4-227ENST00000497984 MRPL46Q9H2W6 279 aaKnown RBP5.09□□□□□ -1.59
SMC4-227ENST00000497984 WDCPQ9H6R7 721 aa5.09□□□□□ -1.59
SMC4-227ENST00000497984 DUSP22Q9NRW4 184 aa5.09□□□□□ -1.59
SMC4-227ENST00000497984 ELOVL5Q9NYP7 299 aa5.09□□□□□ -1.59
SMC4-227ENST00000497984 SMIM35A0A1B0GVV1 85 aa5.08□□□□□ -1.6
SMC4-227ENST00000497984 QSOX1O00391 747 aa5.08□□□□□ -1.6
SMC4-227ENST00000497984 DCLK1O15075 740 aa5.08□□□□□ -1.6
SMC4-227ENST00000497984 DNAJB5O75953 348 aa5.08□□□□□ -1.6
SMC4-227ENST00000497984 FOXG1P55316 489 aaPredicted RBP5.08□□□□□ -1.6
SMC4-227ENST00000497984 NOGQ13253 232 aa5.08□□□□□ -1.6
SMC4-227ENST00000497984 PCID2Q5JVF3 399 aa5.08□□□□□ -1.6
SMC4-227ENST00000497984 TREML2Q5T2D2 321 aa5.08□□□□□ -1.6
SMC4-227ENST00000497984 EFCAB2Q5VUJ9 269 aa5.08□□□□□ -1.6
SMC4-227ENST00000497984 FAM160B1Q5W0V3 765 aa5.08□□□□□ -1.6
SMC4-227ENST00000497984 ICE2Q659A1 982 aa5.08□□□□□ -1.6
SMC4-227ENST00000497984 AWAT2Q6E213 333 aa5.08□□□□□ -1.6
SMC4-227ENST00000497984 CHSY1Q86X52 802 aa5.08□□□□□ -1.6
SMC4-227ENST00000497984 GALNT16Q8N428 558 aa5.08□□□□□ -1.6
SMC4-227ENST00000497984 FAM46DQ8NEK8 389 aa5.08□□□□□ -1.6
SMC4-227ENST00000497984 WASF1Q92558 559 aa5.08□□□□□ -1.6
SMC4-227ENST00000497984 DDX17Q92841 729 aaKnown RBP5.08□□□□□ -1.6
SMC4-227ENST00000497984 TNPO1Q92973 898 aaKnown RBP5.08□□□□□ -1.6
SMC4-227ENST00000497984 RGMAQ96B86 450 aa5.08□□□□□ -1.6
SMC4-227ENST00000497984 CAMKK2Q96RR4 588 aa5.08□□□□□ -1.6
SMC4-227ENST00000497984 WACQ9BTA9 647 aa5.08□□□□□ -1.6
SMC4-227ENST00000497984 FSD1LQ9BXM9 530 aa5.08□□□□□ -1.6
SMC4-227ENST00000497984 USP35Q9P2H5 1018 aa5.08□□□□□ -1.6
SMC4-227ENST00000497984 HESX1Q9UBX0 185 aa5.08□□□□□ -1.6
SMC4-227ENST00000497984 SSX2IPQ9Y2D8 614 aa5.08□□□□□ -1.6
SMC4-227ENST00000497984 ONECUT2O95948 504 aa5.07□□□□□ -1.6
SMC4-227ENST00000497984 NR4A2P43354 598 aa5.07□□□□□ -1.6
SMC4-227ENST00000497984 CCT4P50991 539 aaKnown RBP5.07□□□□□ -1.6
SMC4-227ENST00000497984 HK3P52790 923 aa5.07□□□□□ -1.6
SMC4-227ENST00000497984 FHL1Q13642 323 aa5.07□□□□□ -1.6
SMC4-227ENST00000497984 DAZAP2Q15038 168 aaPredicted RBP5.07□□□□□ -1.6
SMC4-227ENST00000497984 SFRP4Q6FHJ7 346 aaPredicted RBP5.07□□□□□ -1.6
SMC4-227ENST00000497984 PPP1R3BQ86XI6 285 aa5.07□□□□□ -1.6
SMC4-227ENST00000497984 C8orf58Q8NAV2 365 aa5.07□□□□□ -1.6
SMC4-227ENST00000497984 SLC46A1Q96NT5 459 aa5.07□□□□□ -1.6
SMC4-227ENST00000497984 KRTAP2-2Q9BYT5 123 aa5.07□□□□□ -1.6
SMC4-227ENST00000497984 VPS16Q9H269 839 aa5.07□□□□□ -1.6
SMC4-227ENST00000497984 ANLNQ9NQW6 1124 aa5.07□□□□□ -1.6
SMC4-227ENST00000497984 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.07□□□□□ -1.6
SMC4-227ENST00000497984 ABCF2Q9UG63 623 aa5.07□□□□□ -1.6
SMC4-227ENST00000497984 CYP2D7A0A087X1C5 515 aa5.06□□□□□ -1.6
SMC4-227ENST00000497984 KCNU1A8MYU2 1149 aa5.06□□□□□ -1.6
SMC4-227ENST00000497984 AHSGP02765 367 aa5.06□□□□□ -1.6
SMC4-227ENST00000497984 GNAI2P04899 355 aa5.06□□□□□ -1.6
SMC4-227ENST00000497984 PIM1P11309 404 aaPredicted RBP5.06□□□□□ -1.6
SMC4-227ENST00000497984 ENGP17813 658 aa5.06□□□□□ -1.6
SMC4-227ENST00000497984 ARHGAP25P42331 645 aa5.06□□□□□ -1.6
SMC4-227ENST00000497984 GUCY2FP51841 1108 aa5.06□□□□□ -1.6
SMC4-227ENST00000497984 HOXA4Q00056 320 aaPredicted RBP5.06□□□□□ -1.6
SMC4-227ENST00000497984 ITKQ08881 620 aa5.06□□□□□ -1.6
SMC4-227ENST00000497984 CRELD2Q6UXH1 353 aaPredicted RBP5.06□□□□□ -1.6
SMC4-227ENST00000497984 NAPRTQ6XQN6 538 aa5.06□□□□□ -1.6
SMC4-227ENST00000497984 ZNF517Q6ZMY9 492 aaPredicted RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms