RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 TFDP3Q5H9I0 405 aa13.77□□□□□ -0.21
GARNL3-220ENST00000496711 DRICH1Q6PGQ1 229 aaPredicted RBP13.77□□□□□ -0.21
GARNL3-220ENST00000496711 GSTA5Q7RTV2 222 aa13.77□□□□□ -0.21
GARNL3-220ENST00000496711 DPP9Q86TI2 863 aa13.77□□□□□ -0.21
GARNL3-220ENST00000496711 ZNF410Q86VK4 478 aa13.77□□□□□ -0.21
GARNL3-220ENST00000496711 TMEM130Q8N3G9 435 aa13.77□□□□□ -0.21
GARNL3-220ENST00000496711 UHMK1Q8TAS1 419 aaKnown RBP13.77□□□□□ -0.21
GARNL3-220ENST00000496711 MYCBPAPQ8TBZ2 947 aa13.77□□□□□ -0.21
GARNL3-220ENST00000496711 CCHCR1Q8TD31 782 aa13.77□□□□□ -0.21
GARNL3-220ENST00000496711 FNIP1Q8TF40 1166 aa13.77□□□□□ -0.21
GARNL3-220ENST00000496711 ZNF473Q8WTR7 871 aaKnown RBP13.77□□□□□ -0.21
GARNL3-220ENST00000496711 MAML3Q96JK9 1138 aa13.77□□□□□ -0.21
GARNL3-220ENST00000496711 TWNKQ96RR1 684 aa13.77□□□□□ -0.21
GARNL3-220ENST00000496711 ADPGKQ9BRR6 497 aa13.77□□□□□ -0.21
GARNL3-220ENST00000496711 ELOVL4Q9GZR5 314 aa13.77□□□□□ -0.21
GARNL3-220ENST00000496711 FAM107BQ9H098 131 aa13.77□□□□□ -0.21
GARNL3-220ENST00000496711 CLEC11AQ9Y240 323 aa13.77□□□□□ -0.21
GARNL3-220ENST00000496711 C2CD2Q9Y426 696 aa13.77□□□□□ -0.21
GARNL3-220ENST00000496711 LRRD1A4D1F6 860 aa13.76□□□□□ -0.21
GARNL3-220ENST00000496711 MYO1CO00159 1063 aa13.76□□□□□ -0.21
GARNL3-220ENST00000496711 RASGRF2O14827 1237 aa13.76□□□□□ -0.21
GARNL3-220ENST00000496711 FAM107AO95990 144 aa13.76□□□□□ -0.21
GARNL3-220ENST00000496711 SMPD1P17405 629 aa13.76□□□□□ -0.21
GARNL3-220ENST00000496711 KLRC2P26717 231 aa13.76□□□□□ -0.21
GARNL3-220ENST00000496711 RFC1P35251 1148 aaPredicted RBP13.76□□□□□ -0.21
GARNL3-220ENST00000496711 SEC24CP53992 1094 aa13.76□□□□□ -0.21
GARNL3-220ENST00000496711 IZUMO3Q5VZ72 239 aa13.76□□□□□ -0.21
GARNL3-220ENST00000496711 TXNRD3NBQ6F5E7 133 aa13.76□□□□□ -0.21
GARNL3-220ENST00000496711 ILDR2Q71H61 639 aa13.76□□□□□ -0.21
GARNL3-220ENST00000496711 B4GALNT4Q76KP1 1039 aa13.76□□□□□ -0.21
GARNL3-220ENST00000496711 XYLT1Q86Y38 959 aa13.76□□□□□ -0.21
GARNL3-220ENST00000496711 NT5DC4Q86YG4 428 aa13.76□□□□□ -0.21
GARNL3-220ENST00000496711 OR6J1Q8NGC5 347 aa13.76□□□□□ -0.21
GARNL3-220ENST00000496711 TMEM176AQ96HP8 235 aa13.76□□□□□ -0.21
GARNL3-220ENST00000496711 HPDLQ96IR7 371 aa13.76□□□□□ -0.21
GARNL3-220ENST00000496711 ACAP3Q96P50 834 aa13.76□□□□□ -0.21
GARNL3-220ENST00000496711 CPXM1Q96SM3 734 aa13.76□□□□□ -0.21
GARNL3-220ENST00000496711 DDX23Q9BUQ8 820 aaKnown RBP13.76□□□□□ -0.21
GARNL3-220ENST00000496711 ROPN1BQ9BZX4 212 aaPredicted RBP13.76□□□□□ -0.21
GARNL3-220ENST00000496711 SYNCQ9H7C4 482 aa13.76□□□□□ -0.21
GARNL3-220ENST00000496711 ROPN1Q9HAT0 212 aaPredicted RBP13.76□□□□□ -0.21
GARNL3-220ENST00000496711 PPANQ9NQ55 473 aaKnown RBP13.76□□□□□ -0.21
GARNL3-220ENST00000496711 TJP2Q9UDY2 1190 aa13.76□□□□□ -0.21
GARNL3-220ENST00000496711 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.76□□□□□ -0.21
GARNL3-220ENST00000496711 SCN1AP35498 2009 aa13.76□□□□□ -0.21
GARNL3-220ENST00000496711 A0A1B0GUA9 196 aa13.76□□□□□ -0.21
GARNL3-220ENST00000496711 M0QYV0 167 aa13.76□□□□□ -0.21
GARNL3-220ENST00000496711 TRAPPC3O43617 180 aa13.76□□□□□ -0.21
GARNL3-220ENST00000496711 MICAL2O94851 1124 aa13.76□□□□□ -0.21
GARNL3-220ENST00000496711 ACSL3O95573 720 aa13.76□□□□□ -0.21
GARNL3-220ENST00000496711 STAU1O95793 577 aaKnown RBP13.76□□□□□ -0.21
GARNL3-220ENST00000496711 ERBB2P04626 1255 aa13.76□□□□□ -0.21
GARNL3-220ENST00000496711 VDRP11473 427 aa13.76□□□□□ -0.21
GARNL3-220ENST00000496711 CDKN2BP42772 138 aa13.76□□□□□ -0.21
GARNL3-220ENST00000496711 SLC25A11Q02978 314 aaKnown RBP13.76□□□□□ -0.21
GARNL3-220ENST00000496711 INCA1Q0VD86 236 aa13.76□□□□□ -0.21
GARNL3-220ENST00000496711 DCAF4L1Q3SXM0 396 aa13.76□□□□□ -0.21
GARNL3-220ENST00000496711 MARCH8Q5T0T0 291 aa13.76□□□□□ -0.21
GARNL3-220ENST00000496711 MFSD5Q6N075 450 aa13.76□□□□□ -0.21
GARNL3-220ENST00000496711 SPATS2Q86XZ4 545 aaKnown RBP13.76□□□□□ -0.21
GARNL3-220ENST00000496711 JOSD2Q8TAC2 188 aa13.76□□□□□ -0.21
GARNL3-220ENST00000496711 RAPGEF5Q92565 580 aa13.76□□□□□ -0.21
GARNL3-220ENST00000496711 ACSF2Q96CM8 615 aaPredicted RBP13.76□□□□□ -0.21
GARNL3-220ENST00000496711 CCT8L2Q96SF2 557 aa13.76□□□□□ -0.21
GARNL3-220ENST00000496711 PARK7Q99497 189 aaKnown RBP13.76□□□□□ -0.21
GARNL3-220ENST00000496711 ABHD16BQ9H3Z7 469 aa13.76□□□□□ -0.21
GARNL3-220ENST00000496711 FAM124BQ9H5Z6 455 aaPredicted RBP13.76□□□□□ -0.21
GARNL3-220ENST00000496711 METTL5Q9NRN9 209 aaKnown RBP13.76□□□□□ -0.21
GARNL3-220ENST00000496711 DNPEPQ9ULA0 475 aa13.76□□□□□ -0.21
GARNL3-220ENST00000496711 AGAP1Q9UPQ3 857 aa13.76□□□□□ -0.21
GARNL3-220ENST00000496711 ATXN2Q99700 1313 aaKnown RBP13.75□□□□□ -0.21
GARNL3-220ENST00000496711 LRCH4O75427 683 aa13.75□□□□□ -0.21
GARNL3-220ENST00000496711 TTC4O95801 387 aa13.75□□□□□ -0.21
GARNL3-220ENST00000496711 KRT7P08729 469 aa13.75□□□□□ -0.21
GARNL3-220ENST00000496711 GRM5P41594 1212 aa13.75□□□□□ -0.21
GARNL3-220ENST00000496711 MMP13P45452 471 aa13.75□□□□□ -0.21
GARNL3-220ENST00000496711 SLCO1A2P46721 670 aa13.75□□□□□ -0.21
GARNL3-220ENST00000496711 RBP5P82980 135 aa13.75□□□□□ -0.21
GARNL3-220ENST00000496711 AUHQ13825 339 aaKnown RBP13.75□□□□□ -0.21
GARNL3-220ENST00000496711 ZNF268Q14587 947 aaPredicted RBP13.75□□□□□ -0.21
GARNL3-220ENST00000496711 DGKDQ16760 1214 aa13.75□□□□□ -0.21
GARNL3-220ENST00000496711 HADHQ16836 314 aaKnown RBP13.75□□□□□ -0.21
GARNL3-220ENST00000496711 TNFAIP8L3Q5GJ75 292 aa13.75□□□□□ -0.21
GARNL3-220ENST00000496711 MAP1SQ66K74 1059 aaPredicted RBP13.75□□□□□ -0.21
GARNL3-220ENST00000496711 CEP128Q6ZU80 1094 aa13.75□□□□□ -0.21
GARNL3-220ENST00000496711 KIAA0319LQ8IZA0 1049 aa13.75□□□□□ -0.21
GARNL3-220ENST00000496711 TTC39CQ8N584 583 aa13.75□□□□□ -0.21
GARNL3-220ENST00000496711 SELENOSQ9BQE4 189 aa13.75□□□□□ -0.21
GARNL3-220ENST00000496711 TINF2Q9BSI4 451 aa13.75□□□□□ -0.21
GARNL3-220ENST00000496711 DPP3Q9NY33 737 aa13.75□□□□□ -0.21
GARNL3-220ENST00000496711 ZNF148Q9UQR1 794 aa13.75□□□□□ -0.21
GARNL3-220ENST00000496711 GMNCA6NCL1 334 aa13.74□□□□□ -0.21
GARNL3-220ENST00000496711 HMGCRP04035 888 aa13.74□□□□□ -0.21
GARNL3-220ENST00000496711 GABRB2P47870 512 aa13.74□□□□□ -0.21
GARNL3-220ENST00000496711 VCPP55072 806 aaKnown RBP13.74□□□□□ -0.21
GARNL3-220ENST00000496711 CORO7P57737 925 aa13.74□□□□□ -0.21
GARNL3-220ENST00000496711 FKBP1BP68106 108 aa13.74□□□□□ -0.21
GARNL3-220ENST00000496711 ACVR2BQ13705 512 aa13.74□□□□□ -0.21
GARNL3-220ENST00000496711 FAM110CQ1W6H9 321 aa13.74□□□□□ -0.21
GARNL3-220ENST00000496711 P3H1Q32P28 736 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms