RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 SEPT5Q99719 369 aaPredicted RBP17.26■□□□□ 0.35
DNMT3A-215ENST00000496570 SYT15Q9BQS2 421 aa17.26■□□□□ 0.35
DNMT3A-215ENST00000496570 PI4K2AQ9BTU6 479 aa17.26■□□□□ 0.35
DNMT3A-215ENST00000496570 DPEP3Q9H4B8 488 aa17.26■□□□□ 0.35
DNMT3A-215ENST00000496570 LMBRD1Q9NUN5 540 aa17.26■□□□□ 0.35
DNMT3A-215ENST00000496570 NXF1Q9UBU9 619 aaKnown RBP17.26■□□□□ 0.35
DNMT3A-215ENST00000496570 CDH9Q9ULB4 789 aa17.26■□□□□ 0.35
DNMT3A-215ENST00000496570 PCDHB5Q9Y5E4 795 aa17.26■□□□□ 0.35
DNMT3A-215ENST00000496570 NUMBLQ9Y6R0 609 aa17.26■□□□□ 0.35
DNMT3A-215ENST00000496570 TMEM221A6NGB7 291 aa17.25■□□□□ 0.35
DNMT3A-215ENST00000496570 M0R296 226 aa17.25■□□□□ 0.35
DNMT3A-215ENST00000496570 SLC16A3O15427 465 aaKnown RBP17.25■□□□□ 0.35
DNMT3A-215ENST00000496570 NARSO43776 548 aaKnown RBP17.25■□□□□ 0.35
DNMT3A-215ENST00000496570 ASS1P00966 412 aaKnown RBP17.25■□□□□ 0.35
DNMT3A-215ENST00000496570 PDGFRBP09619 1106 aa17.25■□□□□ 0.35
DNMT3A-215ENST00000496570 GJA1P17302 382 aa17.25■□□□□ 0.35
DNMT3A-215ENST00000496570 FCARP24071 287 aa17.25■□□□□ 0.35
DNMT3A-215ENST00000496570 CYP2F1P24903 491 aa17.25■□□□□ 0.35
DNMT3A-215ENST00000496570 RAP1GAPP47736 663 aa17.25■□□□□ 0.35
DNMT3A-215ENST00000496570 TUFMP49411 452 aaKnown RBP17.25■□□□□ 0.35
DNMT3A-215ENST00000496570 EPHB3P54753 998 aa17.25■□□□□ 0.35
DNMT3A-215ENST00000496570 CDH8P55286 799 aa17.25■□□□□ 0.35
DNMT3A-215ENST00000496570 TNNC1P63316 161 aa17.25■□□□□ 0.35
DNMT3A-215ENST00000496570 FKBP3Q00688 224 aaKnown RBP17.25■□□□□ 0.35
DNMT3A-215ENST00000496570 NFE2Q16621 373 aaPredicted RBP17.25■□□□□ 0.35
DNMT3A-215ENST00000496570 MGAT5BQ3V5L5 792 aa17.25■□□□□ 0.35
DNMT3A-215ENST00000496570 CFAP221Q4G0U5 840 aa17.25■□□□□ 0.35
DNMT3A-215ENST00000496570 IQCEQ6IPM2 695 aa17.25■□□□□ 0.35
DNMT3A-215ENST00000496570 SPOPLQ6IQ16 392 aa17.25■□□□□ 0.35
DNMT3A-215ENST00000496570 GAREM2Q75VX8 874 aa17.25■□□□□ 0.35
DNMT3A-215ENST00000496570 PDZD4Q76G19 769 aaPredicted RBP17.25■□□□□ 0.35
DNMT3A-215ENST00000496570 UBALD2Q8IYN6 164 aa17.25■□□□□ 0.35
DNMT3A-215ENST00000496570 ELMOD1Q8N336 334 aa17.25■□□□□ 0.35
DNMT3A-215ENST00000496570 STKLD1Q8NE28 680 aa17.25■□□□□ 0.35
DNMT3A-215ENST00000496570 SHKBP1Q8TBC3 707 aa17.25■□□□□ 0.35
DNMT3A-215ENST00000496570 GPR152Q8TDT2 470 aa17.25■□□□□ 0.35
DNMT3A-215ENST00000496570 TAS1R2Q8TE23 839 aa17.25■□□□□ 0.35
DNMT3A-215ENST00000496570 MCRS1Q96EZ8 462 aa17.25■□□□□ 0.35
DNMT3A-215ENST00000496570 ZSWIM3Q96MP5 696 aa17.25■□□□□ 0.35
DNMT3A-215ENST00000496570 IL21Q9HBE4 155 aa17.25■□□□□ 0.35
DNMT3A-215ENST00000496570 APOBEC3GQ9HC16 384 aaKnown RBP17.25■□□□□ 0.35
DNMT3A-215ENST00000496570 ABCB6Q9NP58 842 aa17.25■□□□□ 0.35
DNMT3A-215ENST00000496570 ASAH2Q9NR71 780 aa17.25■□□□□ 0.35
DNMT3A-215ENST00000496570 KIAA1468Q9P260 1216 aa17.25■□□□□ 0.35
DNMT3A-215ENST00000496570 DUSP12Q9UNI6 340 aa17.25■□□□□ 0.35
DNMT3A-215ENST00000496570 ASB3Q9Y575 518 aa17.25■□□□□ 0.35
DNMT3A-215ENST00000496570 PSMA7O14818 248 aa17.24■□□□□ 0.35
DNMT3A-215ENST00000496570 MYL4P12829 197 aa17.24■□□□□ 0.35
DNMT3A-215ENST00000496570 KRT13P13646 458 aa17.24■□□□□ 0.35
DNMT3A-215ENST00000496570 HMGA1P17096 107 aaKnown RBP17.24■□□□□ 0.35
DNMT3A-215ENST00000496570 GNL1P36915 607 aaPredicted RBP17.24■□□□□ 0.35
DNMT3A-215ENST00000496570 ASPAP45381 313 aa17.24■□□□□ 0.35
DNMT3A-215ENST00000496570 SGSM1Q2NKQ1 1148 aa17.24■□□□□ 0.35
DNMT3A-215ENST00000496570 ZNF667Q5HYK9 610 aa17.24■□□□□ 0.35
DNMT3A-215ENST00000496570 SDHAF4Q5VUM1 108 aa17.24■□□□□ 0.35
DNMT3A-215ENST00000496570 FOXR2Q6PJQ5 311 aa17.24■□□□□ 0.35
DNMT3A-215ENST00000496570 LEMD2Q8NC56 503 aa17.24■□□□□ 0.35
DNMT3A-215ENST00000496570 GIPC2Q8TF65 315 aa17.24■□□□□ 0.35
DNMT3A-215ENST00000496570 SEMA4DQ92854 862 aa17.24■□□□□ 0.35
DNMT3A-215ENST00000496570 NXPE3Q969Y0 559 aa17.24■□□□□ 0.35
DNMT3A-215ENST00000496570 MYLPFQ96A32 169 aa17.24■□□□□ 0.35
DNMT3A-215ENST00000496570 TSG101Q99816 390 aa17.24■□□□□ 0.35
DNMT3A-215ENST00000496570 CLSTN2Q9H4D0 955 aa17.24■□□□□ 0.35
DNMT3A-215ENST00000496570 TMEM8AQ9HCN3 771 aa17.24■□□□□ 0.35
DNMT3A-215ENST00000496570 GDE1Q9NZC3 331 aa17.24■□□□□ 0.35
DNMT3A-215ENST00000496570 ZNF197O14709 1029 aa17.23■□□□□ 0.35
DNMT3A-215ENST00000496570 PDGFBP01127 241 aaPredicted RBP17.23■□□□□ 0.35
DNMT3A-215ENST00000496570 EPB41P11171 864 aaKnown RBP17.23■□□□□ 0.35
DNMT3A-215ENST00000496570 GTF2H1P32780 548 aa17.23■□□□□ 0.35
DNMT3A-215ENST00000496570 PIK3CAP42336 1068 aa17.23■□□□□ 0.35
DNMT3A-215ENST00000496570 TEAD2Q15562 447 aa17.23■□□□□ 0.35
DNMT3A-215ENST00000496570 STXBP5Q5T5C0 1151 aa17.23■□□□□ 0.35
DNMT3A-215ENST00000496570 CYP4A22Q5TCH4 519 aa17.23■□□□□ 0.35
DNMT3A-215ENST00000496570 KLHL10Q6JEL2 608 aa17.23■□□□□ 0.35
DNMT3A-215ENST00000496570 SCARA5Q6ZMJ2 495 aa17.23■□□□□ 0.35
DNMT3A-215ENST00000496570 BMP8AQ7Z5Y6 402 aa17.23■□□□□ 0.35
DNMT3A-215ENST00000496570 TMEM150AQ86TG1 271 aa17.23■□□□□ 0.35
DNMT3A-215ENST00000496570 OR6B3Q8NGW1 331 aa17.23■□□□□ 0.35
DNMT3A-215ENST00000496570 MYCBPAPQ8TBZ2 947 aa17.23■□□□□ 0.35
DNMT3A-215ENST00000496570 NELFBQ8WX92 580 aa17.23■□□□□ 0.35
DNMT3A-215ENST00000496570 TAF4BQ92750 862 aa17.23■□□□□ 0.35
DNMT3A-215ENST00000496570 PCED1BQ96HM7 432 aa17.23■□□□□ 0.35
DNMT3A-215ENST00000496570 FUBP3Q96I24 572 aaKnown RBP eCLIP17.23■□□□□ 0.35
DNMT3A-215ENST00000496570 MED15Q96RN5 788 aa17.23■□□□□ 0.35
DNMT3A-215ENST00000496570 BCO2Q9BYV7 579 aa17.23■□□□□ 0.35
DNMT3A-215ENST00000496570 PLA2G2FQ9BZM2 168 aa17.23■□□□□ 0.35
DNMT3A-215ENST00000496570 HMGXB4Q9UGU5 601 aa17.23■□□□□ 0.35
DNMT3A-215ENST00000496570 NCANO14594 1321 aa17.22■□□□□ 0.35
DNMT3A-215ENST00000496570 A0A1W2PRU2 124 aa17.22■□□□□ 0.35
DNMT3A-215ENST00000496570 PPP1R2P41236 205 aa17.22■□□□□ 0.35
DNMT3A-215ENST00000496570 MAGEA11P43364 429 aa17.22■□□□□ 0.35
DNMT3A-215ENST00000496570 STIM1Q13586 685 aa17.22■□□□□ 0.35
DNMT3A-215ENST00000496570 DDR2Q16832 855 aa17.22■□□□□ 0.35
DNMT3A-215ENST00000496570 CBWD6Q4V339 395 aa17.22■□□□□ 0.35
DNMT3A-215ENST00000496570 CBWD3Q5JTY5 395 aa17.22■□□□□ 0.35
DNMT3A-215ENST00000496570 FAM78AQ5JUQ0 283 aa17.22■□□□□ 0.35
DNMT3A-215ENST00000496570 CBWD5Q5RIA9 395 aa17.22■□□□□ 0.35
DNMT3A-215ENST00000496570 TANGO2Q6ICL3 276 aa17.22■□□□□ 0.35
DNMT3A-215ENST00000496570 ITIH5Q86UX2 942 aa17.22■□□□□ 0.35
DNMT3A-215ENST00000496570 SPATA2LQ8IUW3 424 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms