RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, human

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-233	ENST00000495899	GBP4	Q96PP9	640 aa		13.25	□□□□□ -0.29
MRPL55-233	ENST00000495899	ABCB6	Q9NP58	842 aa		13.25	□□□□□ -0.29
MRPL55-233	ENST00000495899	KIAA1468	Q9P260	1216 aa		13.25	□□□□□ -0.29
MRPL55-233	ENST00000495899	CDH7	Q9ULB5	785 aa		13.25	□□□□□ -0.29
MRPL55-233	ENST00000495899	SORCS3	Q9UPU3	1222 aa		13.25	□□□□□ -0.29
MRPL55-233	ENST00000495899	SLC27A5	Q9Y2P5	690 aa		13.25	□□□□□ -0.29
MRPL55-233	ENST00000495899	YIPF1	Q9Y548	306 aa		13.25	□□□□□ -0.29
MRPL55-233	ENST00000495899	PCDHB5	Q9Y5E4	795 aa		13.25	□□□□□ -0.29
MRPL55-233	ENST00000495899	PPP1R3G	B7ZBB8	358 aa		13.24	□□□□□ -0.29
MRPL55-233	ENST00000495899	EPB41	P11171	864 aa	Known RBP	13.24	□□□□□ -0.29
MRPL55-233	ENST00000495899	P4HA1	P13674	534 aa		13.24	□□□□□ -0.29
MRPL55-233	ENST00000495899	BMP6	P22004	513 aa		13.24	□□□□□ -0.29
MRPL55-233	ENST00000495899	GNL1	P36915	607 aa	Predicted RBP	13.24	□□□□□ -0.29
MRPL55-233	ENST00000495899	EPHA5	P54756	1037 aa		13.24	□□□□□ -0.29
MRPL55-233	ENST00000495899	ZXDA	P98168	799 aa		13.24	□□□□□ -0.29
MRPL55-233	ENST00000495899	MTMR3	Q13615	1198 aa		13.24	□□□□□ -0.29
MRPL55-233	ENST00000495899	MAPRE1	Q15691	268 aa	Known RBP	13.24	□□□□□ -0.29
MRPL55-233	ENST00000495899	INTS6L	Q5JSJ4	861 aa	Known RBP	13.24	□□□□□ -0.29
MRPL55-233	ENST00000495899	ISM2	Q6H9L7	571 aa		13.24	□□□□□ -0.29
MRPL55-233	ENST00000495899	GET4	Q7L5D6	327 aa	Predicted RBP	13.24	□□□□□ -0.29
MRPL55-233	ENST00000495899	FGF13	Q92913	245 aa		13.24	□□□□□ -0.29
MRPL55-233	ENST00000495899	MYADM	Q96S97	322 aa		13.24	□□□□□ -0.29
MRPL55-233	ENST00000495899	PKMYT1	Q99640	499 aa		13.24	□□□□□ -0.29
MRPL55-233	ENST00000495899	CORO1B	Q9BR76	489 aa		13.24	□□□□□ -0.29
MRPL55-233	ENST00000495899	CRISPLD1	Q9H336	500 aa		13.24	□□□□□ -0.29
MRPL55-233	ENST00000495899	SNX25	Q9H3E2	840 aa		13.24	□□□□□ -0.29
MRPL55-233	ENST00000495899	HCFC1R1	Q9NWW0	138 aa		13.24	□□□□□ -0.29
MRPL55-233	ENST00000495899	GDE1	Q9NZC3	331 aa		13.24	□□□□□ -0.29
MRPL55-233	ENST00000495899	CEP72	Q9P209	647 aa		13.24	□□□□□ -0.29
MRPL55-233	ENST00000495899	CDH9	Q9ULB4	789 aa		13.24	□□□□□ -0.29
MRPL55-233	ENST00000495899	MRPS23	Q9Y3D9	190 aa	Known RBP	13.24	□□□□□ -0.29
MRPL55-233	ENST00000495899	BICDL2	A1A5D9	508 aa		13.23	□□□□□ -0.29
MRPL55-233	ENST00000495899	ANHX	E9PGG2	379 aa		13.23	□□□□□ -0.29
MRPL55-233	ENST00000495899	VNN1	O95497	513 aa		13.23	□□□□□ -0.29
MRPL55-233	ENST00000495899	FGF19	O95750	216 aa		13.23	□□□□□ -0.29
MRPL55-233	ENST00000495899	HAPLN1	P10915	354 aa	Predicted RBP	13.23	□□□□□ -0.29
MRPL55-233	ENST00000495899	PMS1	P54277	932 aa	Known RBP	13.23	□□□□□ -0.29
MRPL55-233	ENST00000495899	CAMK4	Q16566	473 aa		13.23	□□□□□ -0.29
MRPL55-233	ENST00000495899	ZNF699	Q32M78	642 aa		13.23	□□□□□ -0.29
MRPL55-233	ENST00000495899	MGAT5B	Q3V5L5	792 aa		13.23	□□□□□ -0.29
MRPL55-233	ENST00000495899	CFAP221	Q4G0U5	840 aa		13.23	□□□□□ -0.29
MRPL55-233	ENST00000495899	ZNF667	Q5HYK9	610 aa		13.23	□□□□□ -0.29
MRPL55-233	ENST00000495899	FAM171B	Q6P995	826 aa		13.23	□□□□□ -0.29
MRPL55-233	ENST00000495899	PDZD4	Q76G19	769 aa	Predicted RBP	13.23	□□□□□ -0.29
MRPL55-233	ENST00000495899	ITIH5	Q86UX2	942 aa		13.23	□□□□□ -0.29
MRPL55-233	ENST00000495899	OSTM1	Q86WC4	334 aa		13.23	□□□□□ -0.29
MRPL55-233	ENST00000495899	PSMG2	Q969U7	264 aa		13.23	□□□□□ -0.29
MRPL55-233	ENST00000495899	FUBP3	Q96I24	572 aa	Known RBP eCLIP	13.23	□□□□□ -0.29
MRPL55-233	ENST00000495899	CEP63	Q96MT8	703 aa		13.23	□□□□□ -0.29
MRPL55-233	ENST00000495899	KCNK12	Q9HB15	430 aa		13.23	□□□□□ -0.29
MRPL55-233	ENST00000495899	TMEM8A	Q9HCN3	771 aa		13.23	□□□□□ -0.29
MRPL55-233	ENST00000495899	NPDC1	Q9NQX5	325 aa	Predicted RBP	13.23	□□□□□ -0.29
MRPL55-233	ENST00000495899	ASAH2	Q9NR71	780 aa		13.23	□□□□□ -0.29
MRPL55-233	ENST00000495899	NXF1	Q9UBU9	619 aa	Known RBP	13.23	□□□□□ -0.29
MRPL55-233	ENST00000495899	GTF3C4	Q9UKN8	822 aa		13.23	□□□□□ -0.29
MRPL55-233	ENST00000495899	MTCL1	Q9Y4B5	1905 aa	Known RBP	13.23	□□□□□ -0.29
MRPL55-233	ENST00000495899	SCN1A	P35498	2009 aa		13.22	□□□□□ -0.29
MRPL55-233	ENST00000495899	BIN1	O00499	593 aa		13.22	□□□□□ -0.29
MRPL55-233	ENST00000495899	ASS1	P00966	412 aa	Known RBP	13.22	□□□□□ -0.29
MRPL55-233	ENST00000495899	ACAT1	P24752	427 aa	Known RBP	13.22	□□□□□ -0.29
MRPL55-233	ENST00000495899	LMO2	P25791	158 aa		13.22	□□□□□ -0.29
MRPL55-233	ENST00000495899	GCLM	P48507	274 aa		13.22	□□□□□ -0.29
MRPL55-233	ENST00000495899	PPP3CA	Q08209	521 aa		13.22	□□□□□ -0.29
MRPL55-233	ENST00000495899	TDG	Q13569	410 aa		13.22	□□□□□ -0.29
MRPL55-233	ENST00000495899	VEPH1	Q14D04	833 aa		13.22	□□□□□ -0.29
MRPL55-233	ENST00000495899	TMEM31	Q5JXX7	168 aa		13.22	□□□□□ -0.29
MRPL55-233	ENST00000495899	PRSS36	Q5K4E3	855 aa		13.22	□□□□□ -0.29
MRPL55-233	ENST00000495899	KRT39	Q6A163	491 aa		13.22	□□□□□ -0.29
MRPL55-233	ENST00000495899	C4orf50	Q6ZRC1	276 aa		13.22	□□□□□ -0.29
MRPL55-233	ENST00000495899	TRIM67	Q6ZTA4	783 aa		13.22	□□□□□ -0.29
MRPL55-233	ENST00000495899	MTSS1L	Q765P7	747 aa		13.22	□□□□□ -0.29
MRPL55-233	ENST00000495899	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	13.22	□□□□□ -0.29
MRPL55-233	ENST00000495899	FILIP1	Q7Z7B0	1213 aa		13.22	□□□□□ -0.29
MRPL55-233	ENST00000495899	OR6B3	Q8NGW1	331 aa		13.22	□□□□□ -0.29
MRPL55-233	ENST00000495899	ITFG1	Q8TB96	612 aa		13.22	□□□□□ -0.29
MRPL55-233	ENST00000495899	EEF2KMT	Q96G04	330 aa		13.22	□□□□□ -0.29
MRPL55-233	ENST00000495899	FAXDC2	Q96IV6	333 aa		13.22	□□□□□ -0.29
MRPL55-233	ENST00000495899	CEP295NL	Q96MC4	621 aa		13.22	□□□□□ -0.29
MRPL55-233	ENST00000495899	SEPT5	Q99719	369 aa	Predicted RBP	13.22	□□□□□ -0.29
MRPL55-233	ENST00000495899	SYT15	Q9BQS2	421 aa		13.22	□□□□□ -0.29
MRPL55-233	ENST00000495899	MRPL45	Q9BRJ2	306 aa	Known RBP	13.22	□□□□□ -0.29
MRPL55-233	ENST00000495899	IMPG2	Q9BZV3	1241 aa		13.22	□□□□□ -0.29
MRPL55-233	ENST00000495899	GPR88	Q9GZN0	384 aa		13.22	□□□□□ -0.29
MRPL55-233	ENST00000495899	DNAJC25	Q9H1X3	360 aa		13.22	□□□□□ -0.29
MRPL55-233	ENST00000495899	METTL14	Q9HCE5	456 aa	Known RBP	13.22	□□□□□ -0.29
MRPL55-233	ENST00000495899	LMBRD1	Q9NUN5	540 aa		13.22	□□□□□ -0.29
MRPL55-233	ENST00000495899	TMLHE	Q9NVH6	421 aa		13.22	□□□□□ -0.29
MRPL55-233	ENST00000495899	ABI2	Q9NYB9	513 aa	Predicted RBP	13.22	□□□□□ -0.29
MRPL55-233	ENST00000495899	MYBPHL	A2RUH7	354 aa		13.21	□□□□□ -0.29
MRPL55-233	ENST00000495899	TRIM49B	A6NDI0	452 aa		13.21	□□□□□ -0.29
MRPL55-233	ENST00000495899	PRR33	A8MZF0	331 aa		13.21	□□□□□ -0.29
MRPL55-233	ENST00000495899	GOLGA6L22	H0YM25	854 aa		13.21	□□□□□ -0.29
MRPL55-233	ENST00000495899	HLA-DRA	P01903	254 aa		13.21	□□□□□ -0.29
MRPL55-233	ENST00000495899	ASGR2	P07307	311 aa		13.21	□□□□□ -0.29
MRPL55-233	ENST00000495899	PDGFRB	P09619	1106 aa		13.21	□□□□□ -0.29
MRPL55-233	ENST00000495899	TRIM49	P0CI25	452 aa		13.21	□□□□□ -0.29
MRPL55-233	ENST00000495899	TRIM49C	P0CI26	452 aa		13.21	□□□□□ -0.29
MRPL55-233	ENST00000495899	PIK3CA	P42336	1068 aa		13.21	□□□□□ -0.29
MRPL55-233	ENST00000495899	MAGEA11	P43364	429 aa		13.21	□□□□□ -0.29
MRPL55-233	ENST00000495899	RPL10A	P62906	217 aa	Known RBP	13.21	□□□□□ -0.29

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