RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.83■■□□□ 1.73
PPP1R3F-205ENST00000495799 FAM170AA1A519 330 aa25.83■■□□□ 1.73
PPP1R3F-205ENST00000495799 BUB1BO60566 1050 aaPredicted RBP25.83■■□□□ 1.73
PPP1R3F-205ENST00000495799 PDGFRBP09619 1106 aa25.83■■□□□ 1.73
PPP1R3F-205ENST00000495799 RRM1P23921 792 aa25.83■■□□□ 1.73
PPP1R3F-205ENST00000495799 PTP4A2Q12974 167 aa25.83■■□□□ 1.73
PPP1R3F-205ENST00000495799 WHAMMP3Q1A5X7 153 aa25.83■■□□□ 1.73
PPP1R3F-205ENST00000495799 TIGD5Q53EQ6 642 aa25.83■■□□□ 1.73
PPP1R3F-205ENST00000495799 COLGALT2Q8IYK4 626 aa25.83■■□□□ 1.73
PPP1R3F-205ENST00000495799 IPO4Q8TEX9 1081 aaKnown RBP25.83■■□□□ 1.73
PPP1R3F-205ENST00000495799 PAAF1Q9BRP4 392 aa25.83■■□□□ 1.73
PPP1R3F-205ENST00000495799 PRDM5Q9NQX1 630 aaPredicted RBP25.83■■□□□ 1.73
PPP1R3F-205ENST00000495799 WDR35Q9P2L0 1181 aa25.83■■□□□ 1.73
PPP1R3F-205ENST00000495799 M0QZQ0 153 aa25.83■■□□□ 1.72
PPP1R3F-205ENST00000495799 EFCAB14O75071 495 aa25.83■■□□□ 1.72
PPP1R3F-205ENST00000495799 KIF4AO95239 1232 aa25.83■■□□□ 1.72
PPP1R3F-205ENST00000495799 SLU7O95391 586 aaKnown RBP25.83■■□□□ 1.72
PPP1R3F-205ENST00000495799 FTCDO95954 541 aa25.83■■□□□ 1.72
PPP1R3F-205ENST00000495799 CYP11A1P05108 521 aa25.83■■□□□ 1.72
PPP1R3F-205ENST00000495799 PFKMP08237 780 aa25.83■■□□□ 1.72
PPP1R3F-205ENST00000495799 PCSK1P29120 753 aa25.83■■□□□ 1.72
PPP1R3F-205ENST00000495799 TAP1Q03518 808 aa25.83■■□□□ 1.72
PPP1R3F-205ENST00000495799 TCTN1Q2MV58 587 aa25.83■■□□□ 1.72
PPP1R3F-205ENST00000495799 PPP1R26Q5T8A7 1209 aaPredicted RBP25.83■■□□□ 1.72
PPP1R3F-205ENST00000495799 OSTM1Q86WC4 334 aa25.83■■□□□ 1.72
PPP1R3F-205ENST00000495799 WDTC1Q8N5D0 677 aa25.83■■□□□ 1.72
PPP1R3F-205ENST00000495799 C12orf29Q8N999 325 aa25.83■■□□□ 1.72
PPP1R3F-205ENST00000495799 B3GALNT2Q8NCR0 500 aa25.83■■□□□ 1.72
PPP1R3F-205ENST00000495799 CASD1Q96PB1 797 aa25.83■■□□□ 1.72
PPP1R3F-205ENST00000495799 DPEP3Q9H4B8 488 aa25.83■■□□□ 1.72
PPP1R3F-205ENST00000495799 SYNCQ9H7C4 482 aa25.83■■□□□ 1.72
PPP1R3F-205ENST00000495799 DDX43Q9NXZ2 648 aaKnown RBP25.83■■□□□ 1.72
PPP1R3F-205ENST00000495799 NME7Q9Y5B8 376 aa25.83■■□□□ 1.72
PPP1R3F-205ENST00000495799 TTC3P53804 2025 aa25.83■■□□□ 1.72
PPP1R3F-205ENST00000495799 BRCA2P51587 3418 aa25.82■■□□□ 1.72
PPP1R3F-205ENST00000495799 ABHD14A-ACY1A0A1B0GW23 586 aa25.82■■□□□ 1.72
PPP1R3F-205ENST00000495799 TRAPPC3O43617 180 aa25.82■■□□□ 1.72
PPP1R3F-205ENST00000495799 RAG1P15918 1043 aa25.82■■□□□ 1.72
PPP1R3F-205ENST00000495799 LMO2P25791 158 aa25.82■■□□□ 1.72
PPP1R3F-205ENST00000495799 GSCP56915 257 aaPredicted RBP25.82■■□□□ 1.72
PPP1R3F-205ENST00000495799 RPS6KA1Q15418 735 aa25.82■■□□□ 1.72
PPP1R3F-205ENST00000495799 PLEKHA7Q6IQ23 1121 aa25.82■■□□□ 1.72
PPP1R3F-205ENST00000495799 TMEM199Q8N511 208 aa25.82■■□□□ 1.72
PPP1R3F-205ENST00000495799 MYRIPQ8NFW9 859 aa25.82■■□□□ 1.72
PPP1R3F-205ENST00000495799 SUSD3Q96L08 255 aa25.82■■□□□ 1.72
PPP1R3F-205ENST00000495799 CDH9Q9ULB4 789 aa25.82■■□□□ 1.72
PPP1R3F-205ENST00000495799 TET1Q8NFU7 2136 aa25.81■■□□□ 1.72
PPP1R3F-205ENST00000495799 DDHD2O94830 711 aa25.81■■□□□ 1.72
PPP1R3F-205ENST00000495799 TYMPP19971 482 aa25.81■■□□□ 1.72
PPP1R3F-205ENST00000495799 GPD2P43304 727 aa25.81■■□□□ 1.72
PPP1R3F-205ENST00000495799 OR1G1P47890 313 aa25.81■■□□□ 1.72
PPP1R3F-205ENST00000495799 DNAJC24Q6P3W2 148 aa25.81■■□□□ 1.72
PPP1R3F-205ENST00000495799 ZNF280BQ86YH2 543 aa25.81■■□□□ 1.72
PPP1R3F-205ENST00000495799 CEP112Q8N8E3 955 aa25.81■■□□□ 1.72
PPP1R3F-205ENST00000495799 TLR10Q9BXR5 811 aa25.81■■□□□ 1.72
PPP1R3F-205ENST00000495799 ABCB6Q9NP58 842 aa25.81■■□□□ 1.72
PPP1R3F-205ENST00000495799 FAM49BQ9NUQ9 324 aa25.81■■□□□ 1.72
PPP1R3F-205ENST00000495799 PCDHB8Q9UN66 801 aa25.81■■□□□ 1.72
PPP1R3F-205ENST00000495799 BCAT1P54687 386 aa25.8■■□□□ 1.72
PPP1R3F-205ENST00000495799 SLC8A3P57103 927 aa25.8■■□□□ 1.72
PPP1R3F-205ENST00000495799 CKAP4Q07065 602 aaKnown RBP25.8■■□□□ 1.72
PPP1R3F-205ENST00000495799 PDCLQ13371 301 aa25.8■■□□□ 1.72
PPP1R3F-205ENST00000495799 CRIPAKQ8N1N5 446 aa25.8■■□□□ 1.72
PPP1R3F-205ENST00000495799 MNS1Q8NEH6 495 aa25.8■■□□□ 1.72
PPP1R3F-205ENST00000495799 RABGGTAQ92696 567 aa25.8■■□□□ 1.72
PPP1R3F-205ENST00000495799 C18orf8Q96DM3 657 aa25.8■■□□□ 1.72
PPP1R3F-205ENST00000495799 TMEM175Q9BSA9 504 aa25.8■■□□□ 1.72
PPP1R3F-205ENST00000495799 ANAPC7Q9UJX3 599 aa25.8■■□□□ 1.72
PPP1R3F-205ENST00000495799 TSC2P49815 1807 aa25.8■■□□□ 1.72
PPP1R3F-205ENST00000495799 PTPN1P18031 435 aaKnown RBP25.79■■□□□ 1.72
PPP1R3F-205ENST00000495799 BRCC3P46736 316 aa25.79■■□□□ 1.72
PPP1R3F-205ENST00000495799 BST2Q10589 180 aaKnown RBP25.79■■□□□ 1.72
PPP1R3F-205ENST00000495799 PTPN20Q4JDL3 420 aa25.79■■□□□ 1.72
PPP1R3F-205ENST00000495799 MFSD5Q6N075 450 aa25.79■■□□□ 1.72
PPP1R3F-205ENST00000495799 CD300LGQ6UXG3 332 aa25.79■■□□□ 1.72
PPP1R3F-205ENST00000495799 NT5DC3Q86UY8 548 aa25.79■■□□□ 1.72
PPP1R3F-205ENST00000495799 THEM5Q8N1Q8 247 aa25.79■■□□□ 1.72
PPP1R3F-205ENST00000495799 LRRC43Q8N309 656 aa25.79■■□□□ 1.72
PPP1R3F-205ENST00000495799 ANKRD52Q8NB46 1076 aa25.79■■□□□ 1.72
PPP1R3F-205ENST00000495799 C3orf20Q8ND61 904 aa25.79■■□□□ 1.72
PPP1R3F-205ENST00000495799 UBA3Q8TBC4 463 aa25.79■■□□□ 1.72
PPP1R3F-205ENST00000495799 STK32AQ8WU08 396 aa25.79■■□□□ 1.72
PPP1R3F-205ENST00000495799 OSBPL9Q96SU4 736 aa25.79■■□□□ 1.72
PPP1R3F-205ENST00000495799 SYT15Q9BQS2 421 aa25.79■■□□□ 1.72
PPP1R3F-205ENST00000495799 COLEC11Q9BWP8 271 aa25.79■■□□□ 1.72
PPP1R3F-205ENST00000495799 MIF4GDA9UHW6 222 aaKnown RBP25.78■■□□□ 1.72
PPP1R3F-205ENST00000495799 MYO1FO00160 1098 aa25.78■■□□□ 1.72
PPP1R3F-205ENST00000495799 CES2O00748 559 aa25.78■■□□□ 1.72
PPP1R3F-205ENST00000495799 GABRB2P47870 512 aa25.78■■□□□ 1.72
PPP1R3F-205ENST00000495799 MAMLD1Q13495 774 aa25.78■■□□□ 1.72
PPP1R3F-205ENST00000495799 ZNF268Q14587 947 aaPredicted RBP25.78■■□□□ 1.72
PPP1R3F-205ENST00000495799 MESDQ14696 234 aa25.78■■□□□ 1.72
PPP1R3F-205ENST00000495799 PAN2Q504Q3 1202 aaKnown RBP25.78■■□□□ 1.72
PPP1R3F-205ENST00000495799 PKDCCQ504Y2 493 aa25.78■■□□□ 1.72
PPP1R3F-205ENST00000495799 HNRNPABQ99729 332 aaKnown RBP25.78■■□□□ 1.72
PPP1R3F-205ENST00000495799 CYLDQ9NQC7 956 aa25.78■■□□□ 1.72
PPP1R3F-205ENST00000495799 LTBP2Q14767 1821 aa25.78■■□□□ 1.72
PPP1R3F-205ENST00000495799 TRIM43BA6NCK2 446 aa25.78■■□□□ 1.72
PPP1R3F-205ENST00000495799 TBKBP1A7MCY6 615 aa25.78■■□□□ 1.72
PPP1R3F-205ENST00000495799 NCK2O43639 380 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms