RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-231ENST00000494973 NOCTQ9UK39 431 aaKnown RBP14.39□□□□□ -0.11
APTX-231ENST00000494973 TIMM13Q9Y5L4 95 aaPredicted RBP14.39□□□□□ -0.11
APTX-231ENST00000494973 VWA8A3KMH1 1905 aa14.39□□□□□ -0.11
APTX-231ENST00000494973 GRXCR1A8MXD5 290 aa14.38□□□□□ -0.11
APTX-231ENST00000494973 C1RP00736 705 aa14.38□□□□□ -0.11
APTX-231ENST00000494973 PDGFRBP09619 1106 aa14.38□□□□□ -0.11
APTX-231ENST00000494973 PNMA6AP0CW24 399 aaPredicted RBP14.38□□□□□ -0.11
APTX-231ENST00000494973 DNAJB2P25686 324 aa14.38□□□□□ -0.11
APTX-231ENST00000494973 BCAT1P54687 386 aa14.38□□□□□ -0.11
APTX-231ENST00000494973 TAP1Q03518 808 aa14.38□□□□□ -0.11
APTX-231ENST00000494973 SMC1AQ14683 1233 aaKnown RBP14.38□□□□□ -0.11
APTX-231ENST00000494973 SPA17Q15506 151 aa14.38□□□□□ -0.11
APTX-231ENST00000494973 LRIT3Q3SXY7 679 aa14.38□□□□□ -0.11
APTX-231ENST00000494973 RTP2Q5QGT7 225 aa14.38□□□□□ -0.11
APTX-231ENST00000494973 C10orf76Q5T2E6 689 aa14.38□□□□□ -0.11
APTX-231ENST00000494973 E4F1Q66K89 784 aaPredicted RBP14.38□□□□□ -0.11
APTX-231ENST00000494973 HGSNATQ68CP4 663 aa14.38□□□□□ -0.11
APTX-231ENST00000494973 SLC8B1Q6J4K2 584 aa14.38□□□□□ -0.11
APTX-231ENST00000494973 FAM171BQ6P995 826 aa14.38□□□□□ -0.11
APTX-231ENST00000494973 WDR59Q6PJI9 974 aa14.38□□□□□ -0.11
APTX-231ENST00000494973 LCLAT1Q6UWP7 414 aa14.38□□□□□ -0.11
APTX-231ENST00000494973 TMEM35BQ8NCS4 154 aa14.38□□□□□ -0.11
APTX-231ENST00000494973 ZNF606Q8WXB4 792 aa14.38□□□□□ -0.11
APTX-231ENST00000494973 TIFAQ96CG3 184 aa14.38□□□□□ -0.11
APTX-231ENST00000494973 TWNKQ96RR1 684 aa14.38□□□□□ -0.11
APTX-231ENST00000494973 HNRNPABQ99729 332 aaKnown RBP14.38□□□□□ -0.11
APTX-231ENST00000494973 ZCWPW1Q9H0M4 648 aa14.38□□□□□ -0.11
APTX-231ENST00000494973 LHX5Q9H2C1 402 aa14.38□□□□□ -0.11
APTX-231ENST00000494973 NHEJ1Q9H9Q4 299 aaPredicted RBP14.38□□□□□ -0.11
APTX-231ENST00000494973 ABCB6Q9NP58 842 aa14.38□□□□□ -0.11
APTX-231ENST00000494973 TLR9Q9NR96 1032 aa14.38□□□□□ -0.11
APTX-231ENST00000494973 SEPT11Q9NVA2 429 aaKnown RBP14.38□□□□□ -0.11
APTX-231ENST00000494973 HSFX1Q9UBD0 423 aa14.38□□□□□ -0.11
APTX-231ENST00000494973 HMGXB4Q9UGU5 601 aa14.38□□□□□ -0.11
APTX-231ENST00000494973 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.38□□□□□ -0.11
APTX-231ENST00000494973 IRAK3Q9Y616 596 aa14.38□□□□□ -0.11
APTX-231ENST00000494973 H3BNC9 293 aa14.37□□□□□ -0.11
APTX-231ENST00000494973 O00370 1275 aa14.37□□□□□ -0.11
APTX-231ENST00000494973 ADH1AP07327 375 aa14.37□□□□□ -0.11
APTX-231ENST00000494973 GZMAP12544 262 aa14.37□□□□□ -0.11
APTX-231ENST00000494973 CPB1P15086 417 aa14.37□□□□□ -0.11
APTX-231ENST00000494973 BRD2P25440 801 aaKnown RBP14.37□□□□□ -0.11
APTX-231ENST00000494973 LMO2P25791 158 aa14.37□□□□□ -0.11
APTX-231ENST00000494973 NDUFV1P49821 464 aa14.37□□□□□ -0.11
APTX-231ENST00000494973 KIF11P52732 1056 aa14.37□□□□□ -0.11
APTX-231ENST00000494973 KRT83P78385 493 aa14.37□□□□□ -0.11
APTX-231ENST00000494973 GOLGA8FQ08AF8 430 aa14.37□□□□□ -0.11
APTX-231ENST00000494973 GOLGA8DPQ0D2H9 430 aa14.37□□□□□ -0.11
APTX-231ENST00000494973 SLC18A3Q16572 532 aa14.37□□□□□ -0.11
APTX-231ENST00000494973 PTPROQ16827 1216 aa14.37□□□□□ -0.11
APTX-231ENST00000494973 KIAA0319Q5VV43 1072 aa14.37□□□□□ -0.11
APTX-231ENST00000494973 TPGS2Q68CL5 300 aa14.37□□□□□ -0.11
APTX-231ENST00000494973 FAM109BQ6ICB4 259 aaPredicted RBP14.37□□□□□ -0.11
APTX-231ENST00000494973 ELMSAN1Q6PJG2 1045 aa14.37□□□□□ -0.11
APTX-231ENST00000494973 TMC7Q7Z402 723 aa14.37□□□□□ -0.11
APTX-231ENST00000494973 NOP9Q86U38 636 aaKnown RBP14.37□□□□□ -0.11
APTX-231ENST00000494973 SPATA2LQ8IUW3 424 aaPredicted RBP14.37□□□□□ -0.11
APTX-231ENST00000494973 LNX1Q8TBB1 728 aaPredicted RBP14.37□□□□□ -0.11
APTX-231ENST00000494973 SPPL2BQ8TCT7 592 aa14.37□□□□□ -0.11
APTX-231ENST00000494973 PPP2R3CQ969Q6 453 aa14.37□□□□□ -0.11
APTX-231ENST00000494973 CYFIP2Q96F07 1278 aa14.37□□□□□ -0.11
APTX-231ENST00000494973 TRIM11Q96F44 468 aa14.37□□□□□ -0.11
APTX-231ENST00000494973 SMARCD1Q96GM5 515 aa14.37□□□□□ -0.11
APTX-231ENST00000494973 CEP295NLQ96MC4 621 aa14.37□□□□□ -0.11
APTX-231ENST00000494973 C17orf80Q9BSJ5 609 aa14.37□□□□□ -0.11
APTX-231ENST00000494973 MED10Q9BTT4 135 aa14.37□□□□□ -0.11
APTX-231ENST00000494973 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.37□□□□□ -0.11
APTX-231ENST00000494973 NKX2-4Q9H2Z4 354 aa14.37□□□□□ -0.11
APTX-231ENST00000494973 RXFP1Q9HBX9 757 aa14.37□□□□□ -0.11
APTX-231ENST00000494973 ENTPD7Q9NQZ7 604 aa14.37□□□□□ -0.11
APTX-231ENST00000494973 ARHGAP20Q9P2F6 1191 aa14.37□□□□□ -0.11
APTX-231ENST00000494973 YBX2Q9Y2T7 364 aaKnown RBP14.37□□□□□ -0.11
APTX-231ENST00000494973 EIF3CLB5ME19 914 aaKnown RBP14.36□□□□□ -0.11
APTX-231ENST00000494973 M0QYV0 167 aa14.36□□□□□ -0.11
APTX-231ENST00000494973 TBC1D4O60343 1298 aa14.36□□□□□ -0.11
APTX-231ENST00000494973 FAM200BP0CF97 657 aa14.36□□□□□ -0.11
APTX-231ENST00000494973 SKILP12757 684 aa14.36□□□□□ -0.11
APTX-231ENST00000494973 IGFBP6P24592 240 aaPredicted RBP14.36□□□□□ -0.11
APTX-231ENST00000494973 ACAT1P24752 427 aaKnown RBP14.36□□□□□ -0.11
APTX-231ENST00000494973 EIF4A3P38919 411 aaKnown RBP14.36□□□□□ -0.11
APTX-231ENST00000494973 PSMC1P62191 440 aaKnown RBP14.36□□□□□ -0.11
APTX-231ENST00000494973 BST2Q10589 180 aaKnown RBP14.36□□□□□ -0.11
APTX-231ENST00000494973 GPR17Q13304 367 aa14.36□□□□□ -0.11
APTX-231ENST00000494973 GPM6BQ13491 265 aa14.36□□□□□ -0.11
APTX-231ENST00000494973 PTPN14Q15678 1187 aa14.36□□□□□ -0.11
APTX-231ENST00000494973 GOLGA7BQ2TAP0 167 aa14.36□□□□□ -0.11
APTX-231ENST00000494973 CFAP221Q4G0U5 840 aa14.36□□□□□ -0.11
APTX-231ENST00000494973 MDH1BQ5I0G3 518 aa14.36□□□□□ -0.11
APTX-231ENST00000494973 PRPF38BQ5VTL8 546 aaKnown RBP14.36□□□□□ -0.11
APTX-231ENST00000494973 VSTM1Q6UX27 236 aa14.36□□□□□ -0.11
APTX-231ENST00000494973 ZNF571Q7Z3V5 609 aaPredicted RBP14.36□□□□□ -0.11
APTX-231ENST00000494973 ANKRD52Q8NB46 1076 aa14.36□□□□□ -0.11
APTX-231ENST00000494973 OR10T2Q8NGX3 314 aa14.36□□□□□ -0.11
APTX-231ENST00000494973 SPPL3Q8TCT6 385 aa14.36□□□□□ -0.11
APTX-231ENST00000494973 IPO4Q8TEX9 1081 aaKnown RBP14.36□□□□□ -0.11
APTX-231ENST00000494973 POF1BQ8WVV4 589 aa14.36□□□□□ -0.11
APTX-231ENST00000494973 DDX1Q92499 740 aaKnown RBP14.36□□□□□ -0.11
APTX-231ENST00000494973 EIF3CQ99613 913 aaKnown RBP14.36□□□□□ -0.11
APTX-231ENST00000494973 TCF25Q9BQ70 676 aa14.36□□□□□ -0.11
APTX-231ENST00000494973 RTP3Q9BQQ7 232 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms