RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 CYP2F1P24903 491 aa35.57■■■■□ 3.28
CBX4-203ENST00000494546 LMO2P25791 158 aa35.57■■■■□ 3.28
CBX4-203ENST00000494546 MYL6P60660 151 aa35.57■■■■□ 3.28
CBX4-203ENST00000494546 PSMC1P62191 440 aaKnown RBP35.57■■■■□ 3.28
CBX4-203ENST00000494546 BIRC3Q13489 604 aa35.57■■■■□ 3.28
CBX4-203ENST00000494546 KCNB1Q14721 858 aa35.57■■■■□ 3.28
CBX4-203ENST00000494546 MLF2Q15773 248 aaPredicted RBP35.57■■■■□ 3.28
CBX4-203ENST00000494546 ARHGAP15Q53QZ3 475 aa35.57■■■■□ 3.28
CBX4-203ENST00000494546 CEP135Q66GS9 1140 aa35.57■■■■□ 3.28
CBX4-203ENST00000494546 SPATA2LQ8IUW3 424 aaPredicted RBP35.57■■■■□ 3.28
CBX4-203ENST00000494546 TMEM174Q8WUU8 243 aa35.57■■■■□ 3.28
CBX4-203ENST00000494546 GCNAQ96QF7 691 aa35.57■■■■□ 3.28
CBX4-203ENST00000494546 SYT15Q9BQS2 421 aa35.57■■■■□ 3.28
CBX4-203ENST00000494546 TRMT61BQ9BVS5 477 aaKnown RBP35.57■■■■□ 3.28
CBX4-203ENST00000494546 ABCB6Q9NP58 842 aa35.57■■■■□ 3.28
CBX4-203ENST00000494546 MYBPHLA2RUH7 354 aa35.56■■■■□ 3.28
CBX4-203ENST00000494546 H0Y858 1186 aa35.56■■■■□ 3.28
CBX4-203ENST00000494546 ATP2C2O75185 946 aa35.56■■■■□ 3.28
CBX4-203ENST00000494546 WARSP23381 471 aaKnown RBP35.56■■■■□ 3.28
CBX4-203ENST00000494546 TNNC1P63316 161 aa35.56■■■■□ 3.28
CBX4-203ENST00000494546 WDR72Q3MJ13 1102 aa35.56■■■■□ 3.28
CBX4-203ENST00000494546 GPR158Q5T848 1215 aa35.56■■■■□ 3.28
CBX4-203ENST00000494546 SDHAF4Q5VUM1 108 aa35.56■■■■□ 3.28
CBX4-203ENST00000494546 VITQ6UXI7 678 aa35.56■■■■□ 3.28
CBX4-203ENST00000494546 FMR1NBQ8N0W7 255 aaPredicted RBP35.56■■■■□ 3.28
CBX4-203ENST00000494546 BRD9Q9H8M2 597 aa35.56■■■■□ 3.28
CBX4-203ENST00000494546 TRPV4Q9HBA0 871 aa35.56■■■■□ 3.28
CBX4-203ENST00000494546 CLSTN1O94985 981 aa35.55■■■■□ 3.28
CBX4-203ENST00000494546 PDGFRBP09619 1106 aa35.55■■■■□ 3.28
CBX4-203ENST00000494546 STARD6P59095 220 aa35.55■■■■□ 3.28
CBX4-203ENST00000494546 CYP4F8P98187 520 aa35.55■■■■□ 3.28
CBX4-203ENST00000494546 GPIHBP1Q8IV16 184 aa35.55■■■■□ 3.28
CBX4-203ENST00000494546 STKLD1Q8NE28 680 aa35.55■■■■□ 3.28
CBX4-203ENST00000494546 MRPL45Q9BRJ2 306 aaKnown RBP35.55■■■■□ 3.28
CBX4-203ENST00000494546 FOXQ1Q9C009 403 aa35.55■■■■□ 3.28
CBX4-203ENST00000494546 SNX25Q9H3E2 840 aa35.55■■■■□ 3.28
CBX4-203ENST00000494546 IL21Q9HBE4 155 aa35.55■■■■□ 3.28
CBX4-203ENST00000494546 NXF1Q9UBU9 619 aaKnown RBP35.55■■■■□ 3.28
CBX4-203ENST00000494546 CDH9Q9ULB4 789 aa35.55■■■■□ 3.28
CBX4-203ENST00000494546 TRAF3IP3Q9Y228 551 aa35.55■■■■□ 3.28
CBX4-203ENST00000494546 FRMD4BQ9Y2L6 1034 aa35.55■■■■□ 3.28
CBX4-203ENST00000494546 PSMC3P17980 439 aa35.54■■■■□ 3.28
CBX4-203ENST00000494546 CDC25CP30307 473 aa35.54■■■■□ 3.28
CBX4-203ENST00000494546 AP3M2P53677 418 aa35.54■■■■□ 3.28
CBX4-203ENST00000494546 RPL10AP62906 217 aaKnown RBP35.54■■■■□ 3.28
CBX4-203ENST00000494546 PRKCQQ04759 706 aa35.54■■■■□ 3.28
CBX4-203ENST00000494546 PNOCQ13519 176 aa35.54■■■■□ 3.28
CBX4-203ENST00000494546 DDR2Q16832 855 aa35.54■■■■□ 3.28
CBX4-203ENST00000494546 TDRD10Q5VZ19 366 aaKnown RBP35.54■■■■□ 3.28
CBX4-203ENST00000494546 CCDC105Q8IYK2 499 aa35.54■■■■□ 3.28
CBX4-203ENST00000494546 SYAP1Q96A49 352 aaPredicted RBP35.54■■■■□ 3.28
CBX4-203ENST00000494546 MAGED2Q9UNF1 606 aaPredicted RBP35.54■■■■□ 3.28
CBX4-203ENST00000494546 SIT1Q9Y3P8 196 aa35.54■■■■□ 3.28
CBX4-203ENST00000494546 HEPACAM2A8MVW5 462 aa35.53■■■■□ 3.28
CBX4-203ENST00000494546 GDI1P31150 447 aa35.53■■■■□ 3.28
CBX4-203ENST00000494546 ATICP31939 592 aa35.53■■■■□ 3.28
CBX4-203ENST00000494546 DLG4P78352 724 aa35.53■■■■□ 3.28
CBX4-203ENST00000494546 CLDN10P78369 228 aa35.53■■■■□ 3.28
CBX4-203ENST00000494546 FAM171BQ6P995 826 aa35.53■■■■□ 3.28
CBX4-203ENST00000494546 ARID3BQ8IVW6 561 aaPredicted RBP35.53■■■■□ 3.28
CBX4-203ENST00000494546 GUF1Q8N442 669 aaKnown RBP35.53■■■■□ 3.28
CBX4-203ENST00000494546 DEPDC1BQ8WUY9 529 aa35.53■■■■□ 3.28
CBX4-203ENST00000494546 ATOH1Q92858 354 aaPredicted RBP35.53■■■■□ 3.28
CBX4-203ENST00000494546 MKNK1Q9BUB5 465 aa35.53■■■■□ 3.28
CBX4-203ENST00000494546 XYLT2Q9H1B5 865 aa35.53■■■■□ 3.28
CBX4-203ENST00000494546 IRF2BPLQ9H1B7 796 aa35.53■■■■□ 3.28
CBX4-203ENST00000494546 FAM86C1Q9NVL1 165 aa35.53■■■■□ 3.28
CBX4-203ENST00000494546 DCNP07585 359 aaKnown RBP35.52■■■■□ 3.28
CBX4-203ENST00000494546 GNL1P36915 607 aaPredicted RBP35.52■■■■□ 3.28
CBX4-203ENST00000494546 CFAP221Q4G0U5 840 aa35.52■■■■□ 3.28
CBX4-203ENST00000494546 C4orf50Q6ZRC1 276 aa35.52■■■■□ 3.28
CBX4-203ENST00000494546 SCN4BQ8IWT1 228 aa35.52■■■■□ 3.28
CBX4-203ENST00000494546 DTWD2Q8NBA8 298 aa35.52■■■■□ 3.28
CBX4-203ENST00000494546 OR6B3Q8NGW1 331 aa35.52■■■■□ 3.28
CBX4-203ENST00000494546 MYLPFQ96A32 169 aa35.52■■■■□ 3.28
CBX4-203ENST00000494546 E2F7Q96AV8 911 aa35.52■■■■□ 3.28
CBX4-203ENST00000494546 CRTAC1Q9NQ79 661 aa35.52■■■■□ 3.28
CBX4-203ENST00000494546 HEBP1Q9NRV9 189 aa35.52■■■■□ 3.28
CBX4-203ENST00000494546 NCANO14594 1321 aa35.52■■■■□ 3.28
CBX4-203ENST00000494546 TACC1O75410 805 aa35.51■■■■□ 3.28
CBX4-203ENST00000494546 STAU1O95793 577 aaKnown RBP35.51■■■■□ 3.28
CBX4-203ENST00000494546 C4BPAP04003 597 aaKnown RBP35.51■■■■□ 3.28
CBX4-203ENST00000494546 CSH1P0DML2 217 aa35.51■■■■□ 3.28
CBX4-203ENST00000494546 CSH2P0DML3 217 aa35.51■■■■□ 3.28
CBX4-203ENST00000494546 HMGA1P17096 107 aaKnown RBP35.51■■■■□ 3.28
CBX4-203ENST00000494546 NR2F2P24468 414 aa35.51■■■■□ 3.28
CBX4-203ENST00000494546 TPRG1Q6ZUI0 275 aa35.51■■■■□ 3.28
CBX4-203ENST00000494546 MFSD6LQ8IWD5 586 aa35.51■■■■□ 3.28
CBX4-203ENST00000494546 DNASE1L2Q92874 299 aa35.51■■■■□ 3.28
CBX4-203ENST00000494546 RSPRY1Q96DX4 576 aa35.51■■■■□ 3.28
CBX4-203ENST00000494546 FUBP3Q96I24 572 aaKnown RBP eCLIP35.51■■■■□ 3.28
CBX4-203ENST00000494546 PHOX2BQ99453 314 aa35.51■■■■□ 3.28
CBX4-203ENST00000494546 TASP1Q9H6P5 420 aa35.51■■■■□ 3.28
CBX4-203ENST00000494546 MAGEC2Q9UBF1 373 aaPredicted RBP35.51■■■■□ 3.28
CBX4-203ENST00000494546 COL4A3Q01955 1670 aa35.5■■■■□ 3.27
CBX4-203ENST00000494546 KANSL1LA0AUZ9 987 aa35.5■■■■□ 3.27
CBX4-203ENST00000494546 NCOA4Q13772 614 aa35.5■■■■□ 3.27
CBX4-203ENST00000494546 ZNF699Q32M78 642 aa35.5■■■■□ 3.27
CBX4-203ENST00000494546 SMYD4Q8IYR2 804 aaPredicted RBP35.5■■■■□ 3.27
CBX4-203ENST00000494546 PJA1Q8NG27 643 aa35.5■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms