RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 REM2Q8IYK8 340 aaPredicted RBP17.48■□□□□ 0.39
ATG4B-225ENST00000494465 KATNAL2Q8IYT4 538 aa17.48■□□□□ 0.39
ATG4B-225ENST00000494465 ZBTB9Q96C00 473 aa17.48■□□□□ 0.39
ATG4B-225ENST00000494465 OSBPL7Q9BZF2 842 aa17.48■□□□□ 0.39
ATG4B-225ENST00000494465 GOLGA2P5Q9HBQ8 144 aa17.48■□□□□ 0.39
ATG4B-225ENST00000494465 SRRDQ9UH36 339 aa17.48■□□□□ 0.39
ATG4B-225ENST00000494465 USTQ9Y2C2 406 aa17.48■□□□□ 0.39
ATG4B-225ENST00000494465 SIGLEC16A6NMB1 481 aa17.48■□□□□ 0.39
ATG4B-225ENST00000494465 F8VP50 259 aa17.48■□□□□ 0.39
ATG4B-225ENST00000494465 PTGESO14684 152 aa17.48■□□□□ 0.39
ATG4B-225ENST00000494465 CHRNA3P32297 505 aa17.48■□□□□ 0.39
ATG4B-225ENST00000494465 DR1Q01658 176 aa17.48■□□□□ 0.39
ATG4B-225ENST00000494465 PDCLQ13371 301 aa17.48■□□□□ 0.39
ATG4B-225ENST00000494465 CUL1Q13616 776 aa17.48■□□□□ 0.39
ATG4B-225ENST00000494465 LLGL1Q15334 1064 aa17.48■□□□□ 0.39
ATG4B-225ENST00000494465 DCUN1D2Q6PH85 259 aa17.48■□□□□ 0.39
ATG4B-225ENST00000494465 RSPH3Q86UC2 560 aa17.48■□□□□ 0.39
ATG4B-225ENST00000494465 NIPA2Q8N8Q9 360 aa17.48■□□□□ 0.39
ATG4B-225ENST00000494465 UBA3Q8TBC4 463 aa17.48■□□□□ 0.39
ATG4B-225ENST00000494465 TRIM51Q9BSJ1 452 aa17.48■□□□□ 0.39
ATG4B-225ENST00000494465 PCYOX1Q9UHG3 505 aa17.48■□□□□ 0.39
ATG4B-225ENST00000494465 MEIS3P2A8K0S8 358 aa17.47■□□□□ 0.39
ATG4B-225ENST00000494465 RPS6KA5O75582 802 aa17.47■□□□□ 0.39
ATG4B-225ENST00000494465 OAS2P29728 719 aaKnown RBP17.47■□□□□ 0.39
ATG4B-225ENST00000494465 RFC1P35251 1148 aaPredicted RBP17.47■□□□□ 0.39
ATG4B-225ENST00000494465 PSMC1P62191 440 aaKnown RBP17.47■□□□□ 0.39
ATG4B-225ENST00000494465 DHX34Q14147 1143 aaKnown RBP17.47■□□□□ 0.39
ATG4B-225ENST00000494465 FBXO47Q5MNV8 452 aa17.47■□□□□ 0.39
ATG4B-225ENST00000494465 ANKS1BQ7Z6G8 1248 aa17.47■□□□□ 0.39
ATG4B-225ENST00000494465 C12orf50Q8NA57 414 aaPredicted RBP17.47■□□□□ 0.39
ATG4B-225ENST00000494465 TSEN2Q8NCE0 465 aaKnown RBP17.47■□□□□ 0.39
ATG4B-225ENST00000494465 JOSD2Q8TAC2 188 aa17.47■□□□□ 0.39
ATG4B-225ENST00000494465 MAGOHBQ96A72 148 aaKnown RBP17.47■□□□□ 0.39
ATG4B-225ENST00000494465 PLVAPQ9BX97 442 aa17.47■□□□□ 0.39
ATG4B-225ENST00000494465 NEUROG2Q9H2A3 272 aa17.47■□□□□ 0.39
ATG4B-225ENST00000494465 TSPAN16Q9UKR8 245 aa17.47■□□□□ 0.39
ATG4B-225ENST00000494465 GOLGA8SH3BPF8 625 aa17.47■□□□□ 0.39
ATG4B-225ENST00000494465 AARSP49588 968 aaKnown RBP eCLIP17.47■□□□□ 0.39
ATG4B-225ENST00000494465 PKDCCQ504Y2 493 aa17.47■□□□□ 0.39
ATG4B-225ENST00000494465 DPH6Q7L8W6 267 aa17.47■□□□□ 0.39
ATG4B-225ENST00000494465 LIMS2Q7Z4I7 341 aa17.47■□□□□ 0.39
ATG4B-225ENST00000494465 ACOT1Q86TX2 421 aa17.47■□□□□ 0.39
ATG4B-225ENST00000494465 CD99L2Q8TCZ2 262 aa17.47■□□□□ 0.39
ATG4B-225ENST00000494465 KBTBD7Q8WVZ9 684 aa17.47■□□□□ 0.39
ATG4B-225ENST00000494465 AGO3Q9H9G7 860 aaKnown RBP17.47■□□□□ 0.39
ATG4B-225ENST00000494465 GDAP2Q9NXN4 497 aa17.47■□□□□ 0.39
ATG4B-225ENST00000494465 LCMT1Q9UIC8 334 aa17.47■□□□□ 0.39
ATG4B-225ENST00000494465 FAM187AA6NFU0 413 aa17.46■□□□□ 0.39
ATG4B-225ENST00000494465 DAPK3O43293 454 aa17.46■□□□□ 0.39
ATG4B-225ENST00000494465 MYCNP04198 464 aaPredicted RBP17.46■□□□□ 0.39
ATG4B-225ENST00000494465 ZNF268Q14587 947 aaPredicted RBP17.46■□□□□ 0.39
ATG4B-225ENST00000494465 PPP1R26Q5T8A7 1209 aaPredicted RBP17.46■□□□□ 0.39
ATG4B-225ENST00000494465 DUPD1Q68J44 220 aa17.46■□□□□ 0.39
ATG4B-225ENST00000494465 JAMLQ86YT9 394 aa17.46■□□□□ 0.39
ATG4B-225ENST00000494465 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.46■□□□□ 0.396e-11■■■■■ 51.9
ATG4B-225ENST00000494465 MCRS1Q96EZ8 462 aa17.46■□□□□ 0.39
ATG4B-225ENST00000494465 ZFP42Q96MM3 310 aa17.46■□□□□ 0.39
ATG4B-225ENST00000494465 PPP1R10Q96QC0 940 aaKnown RBP17.46■□□□□ 0.39
ATG4B-225ENST00000494465 WDR35Q9P2L0 1181 aa17.46■□□□□ 0.39
ATG4B-225ENST00000494465 MTUS1Q9ULD2 1270 aa17.46■□□□□ 0.39
ATG4B-225ENST00000494465 KPNA7A9QM74 516 aa17.46■□□□□ 0.39
ATG4B-225ENST00000494465 AGPSO00116 658 aa17.46■□□□□ 0.39
ATG4B-225ENST00000494465 XPOTO43592 962 aaKnown RBP17.46■□□□□ 0.39
ATG4B-225ENST00000494465 HCRTO43612 131 aa17.46■□□□□ 0.39
ATG4B-225ENST00000494465 TRPA1O75762 1119 aa17.46■□□□□ 0.39
ATG4B-225ENST00000494465 KRT3P12035 628 aa17.46■□□□□ 0.39
ATG4B-225ENST00000494465 ATF7P17544 494 aaPredicted RBP17.46■□□□□ 0.39
ATG4B-225ENST00000494465 NFX1Q12986 1120 aaKnown RBP17.46■□□□□ 0.39
ATG4B-225ENST00000494465 KLF1Q13351 362 aaPredicted RBP17.46■□□□□ 0.39
ATG4B-225ENST00000494465 PIGHQ14442 188 aaPredicted RBP17.46■□□□□ 0.39
ATG4B-225ENST00000494465 ATP13A4Q4VNC1 1196 aa17.46■□□□□ 0.39
ATG4B-225ENST00000494465 CCDC137Q6PK04 289 aaKnown RBP17.46■□□□□ 0.39
ATG4B-225ENST00000494465 UNC93AQ86WB7 457 aa17.46■□□□□ 0.39
ATG4B-225ENST00000494465 GSTCDQ8NEC7 633 aa17.46■□□□□ 0.39
ATG4B-225ENST00000494465 EXD1Q8NHP7 514 aa17.46■□□□□ 0.39
ATG4B-225ENST00000494465 LRRC19Q9H756 370 aa17.46■□□□□ 0.39
ATG4B-225ENST00000494465 FAM105AQ9NUU6 356 aa17.46■□□□□ 0.39
ATG4B-225ENST00000494465 UTP11Q9Y3A2 253 aaKnown RBP17.46■□□□□ 0.39
ATG4B-225ENST00000494465 FGFR1P11362 822 aa17.45■□□□□ 0.38
ATG4B-225ENST00000494465 LRPAP1P30533 357 aa17.45■□□□□ 0.38
ATG4B-225ENST00000494465 COILP38432 576 aaPredicted RBP17.45■□□□□ 0.38
ATG4B-225ENST00000494465 PTGISQ16647 500 aa17.45■□□□□ 0.38
ATG4B-225ENST00000494465 LRRC38Q5VT99 294 aa17.45■□□□□ 0.38
ATG4B-225ENST00000494465 TTC30AQ86WT1 665 aa17.45■□□□□ 0.38
ATG4B-225ENST00000494465 ARFGAP1Q8N6T3 406 aa17.45■□□□□ 0.38
ATG4B-225ENST00000494465 FNIP1Q8TF40 1166 aa17.45■□□□□ 0.38
ATG4B-225ENST00000494465 ZNF560Q96MR9 790 aa17.45■□□□□ 0.38
ATG4B-225ENST00000494465 ERP44Q9BS26 406 aa17.45■□□□□ 0.38
ATG4B-225ENST00000494465 CHST12Q9NRB3 414 aa17.45■□□□□ 0.38
ATG4B-225ENST00000494465 CREBZFQ9NS37 354 aa17.45■□□□□ 0.38
ATG4B-225ENST00000494465 RALAP11233 206 aa17.45■□□□□ 0.38
ATG4B-225ENST00000494465 PNPLA4P41247 253 aa17.45■□□□□ 0.38
ATG4B-225ENST00000494465 STILQ15468 1287 aa17.45■□□□□ 0.38
ATG4B-225ENST00000494465 GOLGA7BQ2TAP0 167 aa17.45■□□□□ 0.38
ATG4B-225ENST00000494465 ZNF618Q5T7W0 954 aa17.45■□□□□ 0.38
ATG4B-225ENST00000494465 TXNRD3NBQ6F5E7 133 aa17.45■□□□□ 0.38
ATG4B-225ENST00000494465 MREGQ8N565 214 aa17.45■□□□□ 0.38
ATG4B-225ENST00000494465 RAB17Q9H0T7 212 aa17.45■□□□□ 0.38
ATG4B-225ENST00000494465 DPEP3Q9H4B8 488 aa17.45■□□□□ 0.38
ATG4B-225ENST00000494465 SYNCQ9H7C4 482 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms