RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 NKRFO15226 690 aaKnown RBP eCLIP12.2□□□□□ -0.46
COL25A1-204ENST00000494183 PMPCBO75439 489 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 GHRP10912 638 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 UGP2Q16851 508 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 ANKRD20A4Q4UJ75 823 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 ANKRD20A8PQ5CZ79 823 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 ANKRD20A2Q5SQ80 823 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 ANKRD20A1Q5TYW2 823 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 TDRD10Q5VZ19 366 aaKnown RBP12.2□□□□□ -0.46
COL25A1-204ENST00000494183 VSIG10LQ86VR7 867 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 WDR49Q8IV35 697 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 LRRC43Q8N309 656 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 ZNF507Q8TCN5 953 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 DDX27Q96GQ7 796 aaKnown RBP12.2□□□□□ -0.46
COL25A1-204ENST00000494183 ZNF197O14709 1029 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 TLR2O60603 784 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 NDUFS3O75489 264 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 ANP32DO95626 131 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 AKAP5P24588 427 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 COILP38432 576 aaPredicted RBP12.2□□□□□ -0.46
COL25A1-204ENST00000494183 HSPA9P38646 679 aaKnown RBP12.2□□□□□ -0.46
COL25A1-204ENST00000494183 ZNF200P98182 395 aaPredicted RBP12.2□□□□□ -0.46
COL25A1-204ENST00000494183 USP50Q70EL3 339 aaPredicted RBP12.2□□□□□ -0.46
COL25A1-204ENST00000494183 NIPA1Q7RTP0 329 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 TLK2Q86UE8 772 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 NLRP14Q86W24 1093 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 DDIASQ8IXT1 998 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 ADGRF2Q8IZF7 708 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 ZBTB45Q96K62 511 aaPredicted RBP12.2□□□□□ -0.46
COL25A1-204ENST00000494183 SPATA17Q96L03 361 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 TRIM33Q9UPN9 1127 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 TRAF3IP3Q9Y228 551 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 ADCY3O60266 1144 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 POMCP01189 267 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 PTGER2P43116 358 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 MOB2Q70IA6 237 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 DEFB128Q7Z7B8 93 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 NCLNQ969V3 563 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 PBXIP1Q96AQ6 731 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 CYP4F11Q9HBI6 524 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 ETNK1Q9HBU6 452 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 VTA1Q9NP79 307 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 SMIM24O75264 130 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 PPP1R37O75864 691 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 AGTP01019 485 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 AKT1P31749 480 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 KRT80Q6KB66 452 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 KRT82Q9NSB4 513 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 L3MBTL1Q9Y468 752 aa12.2□□□□□ -0.46
COL25A1-204ENST00000494183 TCP11X1B4DZS4 312 aa12.19□□□□□ -0.46
COL25A1-204ENST00000494183 CKMP06732 381 aa12.19□□□□□ -0.46
COL25A1-204ENST00000494183 AKR1A1P14550 325 aa12.19□□□□□ -0.46
COL25A1-204ENST00000494183 STIP1P31948 543 aaKnown RBP12.19□□□□□ -0.46
COL25A1-204ENST00000494183 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.19□□□□□ -0.46
COL25A1-204ENST00000494183 CTXN3Q4LDR2 81 aa12.19□□□□□ -0.46
COL25A1-204ENST00000494183 NYAP1Q6ZVC0 841 aa12.19□□□□□ -0.46
COL25A1-204ENST00000494183 CCDC33Q8N5R6 958 aa12.19□□□□□ -0.46
COL25A1-204ENST00000494183 KRT35Q92764 455 aa12.19□□□□□ -0.46
COL25A1-204ENST00000494183 FBXO32Q969P5 355 aa12.19□□□□□ -0.46
COL25A1-204ENST00000494183 SLC35C1Q96A29 364 aa12.19□□□□□ -0.46
COL25A1-204ENST00000494183 ZNF669Q96BR6 464 aaPredicted RBP12.19□□□□□ -0.46
COL25A1-204ENST00000494183 TMEM176AQ96HP8 235 aa12.19□□□□□ -0.46
COL25A1-204ENST00000494183 CCDC138Q96M89 665 aa12.19□□□□□ -0.46
COL25A1-204ENST00000494183 PURBQ96QR8 312 aaKnown RBP12.19□□□□□ -0.46
COL25A1-204ENST00000494183 C20orf96Q9NUD7 363 aaPredicted RBP12.19□□□□□ -0.46
COL25A1-204ENST00000494183 PSMD3O43242 534 aa12.19□□□□□ -0.46
COL25A1-204ENST00000494183 KCNA2P16389 499 aa12.19□□□□□ -0.46
COL25A1-204ENST00000494183 SARSP49591 514 aaKnown RBP12.19□□□□□ -0.46
COL25A1-204ENST00000494183 BCAT1P54687 386 aa12.19□□□□□ -0.46
COL25A1-204ENST00000494183 KCNA1Q09470 495 aa12.19□□□□□ -0.46
COL25A1-204ENST00000494183 ACVR2BQ13705 512 aa12.19□□□□□ -0.46
COL25A1-204ENST00000494183 CAPRIN1Q14444 709 aaKnown RBP12.19□□□□□ -0.46
COL25A1-204ENST00000494183 SLC29A2Q14542 456 aa12.19□□□□□ -0.46
COL25A1-204ENST00000494183 PGBD3Q8N328 593 aa12.19□□□□□ -0.46
COL25A1-204ENST00000494183 GIPC2Q8TF65 315 aa12.19□□□□□ -0.46
COL25A1-204ENST00000494183 N4BP2L2Q92802 583 aaPredicted RBP12.19□□□□□ -0.46
COL25A1-204ENST00000494183 RANBP17Q9H2T7 1088 aaKnown RBP12.19□□□□□ -0.46
COL25A1-204ENST00000494183 AAASQ9NRG9 546 aa12.19□□□□□ -0.46
COL25A1-204ENST00000494183 GPATCH2LQ9NWQ4 482 aa12.19□□□□□ -0.46
COL25A1-204ENST00000494183 ARHGEF38Q9NXL2 777 aa12.19□□□□□ -0.46
COL25A1-204ENST00000494183 ACKR2O00590 384 aa12.19□□□□□ -0.46
COL25A1-204ENST00000494183 MEIS2O14770 477 aa12.19□□□□□ -0.46
COL25A1-204ENST00000494183 MTSS1O43312 755 aa12.19□□□□□ -0.46
COL25A1-204ENST00000494183 LRG1P02750 347 aa12.19□□□□□ -0.46
COL25A1-204ENST00000494183 POLBP06746 335 aa12.19□□□□□ -0.46
COL25A1-204ENST00000494183 DMTNQ08495 405 aa12.19□□□□□ -0.46
COL25A1-204ENST00000494183 CRY2Q49AN0 593 aa12.19□□□□□ -0.46
COL25A1-204ENST00000494183 FAM172AQ8WUF8 416 aa12.19□□□□□ -0.46
COL25A1-204ENST00000494183 SPIRE2Q8WWL2 714 aa12.19□□□□□ -0.46
COL25A1-204ENST00000494183 SEPT8Q92599 483 aa12.19□□□□□ -0.46
COL25A1-204ENST00000494183 DUSP9Q99956 384 aaKnown RBP12.19□□□□□ -0.46
COL25A1-204ENST00000494183 XPNPEP3Q9NQH7 507 aa12.19□□□□□ -0.46
COL25A1-204ENST00000494183 CPSF2Q9P2I0 782 aaKnown RBP12.19□□□□□ -0.46
COL25A1-204ENST00000494183 KIF20BQ96Q89 1820 aa12.19□□□□□ -0.46
COL25A1-204ENST00000494183 GTPBP10A4D1E9 387 aaKnown RBP12.18□□□□□ -0.46
COL25A1-204ENST00000494183 TMEM247A6NEH6 219 aa12.18□□□□□ -0.46
COL25A1-204ENST00000494183 ZNF263O14978 683 aa12.18□□□□□ -0.46
COL25A1-204ENST00000494183 CENPCQ03188 943 aa12.18□□□□□ -0.46
COL25A1-204ENST00000494183 PDAP1Q13442 181 aaKnown RBP12.18□□□□□ -0.46
COL25A1-204ENST00000494183 TMEM119Q4V9L6 283 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms