RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 EBF3Q9H4W6 596 aa11.87□□□□□ -0.51
SNRNP200-207ENST00000493271 TMEM206Q9H813 350 aa11.87□□□□□ -0.51
SNRNP200-207ENST00000493271 ABCB6Q9NP58 842 aa11.87□□□□□ -0.51
SNRNP200-207ENST00000493271 RXFP3Q9NSD7 469 aa11.87□□□□□ -0.51
SNRNP200-207ENST00000493271 ABI2Q9NYB9 513 aaPredicted RBP11.87□□□□□ -0.51
SNRNP200-207ENST00000493271 TSC2P49815 1807 aa11.87□□□□□ -0.51
SNRNP200-207ENST00000493271 SPAG17Q6Q759 2223 aa11.87□□□□□ -0.51
SNRNP200-207ENST00000493271 MYH11P35749 1972 aa11.87□□□□□ -0.51
SNRNP200-207ENST00000493271 TMEM8BA6NDV4 472 aa11.86□□□□□ -0.51
SNRNP200-207ENST00000493271 FAM13AO94988 1023 aa11.86□□□□□ -0.51
SNRNP200-207ENST00000493271 EGFP01133 1207 aa11.86□□□□□ -0.51
SNRNP200-207ENST00000493271 NFICP08651 508 aa11.86□□□□□ -0.51
SNRNP200-207ENST00000493271 HMGA1P17096 107 aaKnown RBP11.86□□□□□ -0.51
SNRNP200-207ENST00000493271 GJA4P35212 333 aa11.86□□□□□ -0.51
SNRNP200-207ENST00000493271 PXNP49023 591 aaPredicted RBP11.86□□□□□ -0.51
SNRNP200-207ENST00000493271 PDE6CP51160 858 aa11.86□□□□□ -0.51
SNRNP200-207ENST00000493271 GALK1P51570 392 aa11.86□□□□□ -0.51
SNRNP200-207ENST00000493271 GUCY2FP51841 1108 aa11.86□□□□□ -0.51
SNRNP200-207ENST00000493271 RPL10AP62906 217 aaKnown RBP11.86□□□□□ -0.51
SNRNP200-207ENST00000493271 GTF2BQ00403 316 aa11.86□□□□□ -0.51
SNRNP200-207ENST00000493271 NR1H3Q13133 447 aa11.86□□□□□ -0.51
SNRNP200-207ENST00000493271 MTF1Q14872 753 aa11.86□□□□□ -0.51
SNRNP200-207ENST00000493271 CCDC6Q16204 474 aa11.86□□□□□ -0.51
SNRNP200-207ENST00000493271 ARSHQ5FYA8 562 aa11.86□□□□□ -0.51
SNRNP200-207ENST00000493271 MYCT1Q8N699 235 aa11.86□□□□□ -0.51
SNRNP200-207ENST00000493271 SPATA18Q8TC71 538 aa11.86□□□□□ -0.51
SNRNP200-207ENST00000493271 GIPC2Q8TF65 315 aa11.86□□□□□ -0.51
SNRNP200-207ENST00000493271 CALML4Q96GE6 196 aa11.86□□□□□ -0.51
SNRNP200-207ENST00000493271 MYRFLQ96LU7 910 aa11.86□□□□□ -0.51
SNRNP200-207ENST00000493271 REEP2Q9BRK0 252 aa11.86□□□□□ -0.51
SNRNP200-207ENST00000493271 PYM1Q9BRP8 204 aaKnown RBP11.86□□□□□ -0.51
SNRNP200-207ENST00000493271 ST6GALNAC4Q9H4F1 302 aa11.86□□□□□ -0.51
SNRNP200-207ENST00000493271 ECT2Q9H8V3 914 aa11.86□□□□□ -0.51
SNRNP200-207ENST00000493271 DPP3Q9NY33 737 aa11.86□□□□□ -0.51
SNRNP200-207ENST00000493271 CEP295Q9C0D2 2601 aa11.86□□□□□ -0.51
SNRNP200-207ENST00000493271 BCLAF3A2AJT9 711 aaKnown RBP11.85□□□□□ -0.51
SNRNP200-207ENST00000493271 VWA3AA6NCI4 1184 aa11.85□□□□□ -0.51
SNRNP200-207ENST00000493271 KPNA7A9QM74 516 aa11.85□□□□□ -0.51
SNRNP200-207ENST00000493271 TBCAO75347 108 aaKnown RBP11.85□□□□□ -0.51
SNRNP200-207ENST00000493271 IL18RAPO95256 599 aa11.85□□□□□ -0.51
SNRNP200-207ENST00000493271 CAVIN2O95810 425 aa11.85□□□□□ -0.51
SNRNP200-207ENST00000493271 USP17L7P0C7H9 530 aa11.85□□□□□ -0.51
SNRNP200-207ENST00000493271 TCF3P15923 654 aa11.85□□□□□ -0.51
SNRNP200-207ENST00000493271 PFKLP17858 780 aa11.85□□□□□ -0.51
SNRNP200-207ENST00000493271 CSRP1P21291 193 aaKnown RBP11.85□□□□□ -0.51
SNRNP200-207ENST00000493271 UBA7P41226 1012 aa11.85□□□□□ -0.51
SNRNP200-207ENST00000493271 NOVA1P51513 510 aaKnown RBP11.85□□□□□ -0.51
SNRNP200-207ENST00000493271 CREB5Q02930 508 aa11.85□□□□□ -0.51
SNRNP200-207ENST00000493271 DMC1Q14565 340 aa11.85□□□□□ -0.51
SNRNP200-207ENST00000493271 POSTNQ15063 836 aa11.85□□□□□ -0.51
SNRNP200-207ENST00000493271 USP39Q53GS9 565 aaKnown RBP11.85□□□□□ -0.51
SNRNP200-207ENST00000493271 TRIM68Q6AZZ1 485 aa11.85□□□□□ -0.51
SNRNP200-207ENST00000493271 ADALQ6DHV7 355 aa11.85□□□□□ -0.51
SNRNP200-207ENST00000493271 PSAPL1Q6NUJ1 521 aa11.85□□□□□ -0.51
SNRNP200-207ENST00000493271 TMEM150AQ86TG1 271 aa11.85□□□□□ -0.51
SNRNP200-207ENST00000493271 GPBP1Q86WP2 473 aa11.85□□□□□ -0.51
SNRNP200-207ENST00000493271 TMEM86AQ8N2M4 240 aa11.85□□□□□ -0.51
SNRNP200-207ENST00000493271 KIAA1958Q8N8K9 716 aa11.85□□□□□ -0.51
SNRNP200-207ENST00000493271 FSIP1Q8NA03 581 aa11.85□□□□□ -0.51
SNRNP200-207ENST00000493271 RPLP0P6Q8NHW5 317 aa11.85□□□□□ -0.51
SNRNP200-207ENST00000493271 OSCP1Q8WVF1 389 aa11.85□□□□□ -0.51
SNRNP200-207ENST00000493271 CD101Q93033 1021 aa11.85□□□□□ -0.51
SNRNP200-207ENST00000493271 HVCN1Q96D96 273 aa11.85□□□□□ -0.51
SNRNP200-207ENST00000493271 CHFRQ96EP1 664 aa11.85□□□□□ -0.51
SNRNP200-207ENST00000493271 CEP295NLQ96MC4 621 aa11.85□□□□□ -0.51
SNRNP200-207ENST00000493271 HHIPQ96QV1 700 aa11.85□□□□□ -0.51
SNRNP200-207ENST00000493271 ACBD6Q9BR61 282 aa11.85□□□□□ -0.51
SNRNP200-207ENST00000493271 SMG9Q9H0W8 520 aaKnown RBP11.85□□□□□ -0.51
SNRNP200-207ENST00000493271 CCL26Q9Y258 94 aa11.85□□□□□ -0.51
SNRNP200-207ENST00000493271 STYXL1Q9Y6J8 313 aa11.85□□□□□ -0.51
SNRNP200-207ENST00000493271 TRAV19A0A0A6YYK7 116 aa11.84□□□□□ -0.51
SNRNP200-207ENST00000493271 OTOL1A6NHN0 477 aaPredicted RBP11.84□□□□□ -0.51
SNRNP200-207ENST00000493271 KHNYNO15037 678 aaKnown RBP11.84□□□□□ -0.51
SNRNP200-207ENST00000493271 PRPF40AO75400 957 aaKnown RBP11.84□□□□□ -0.51
SNRNP200-207ENST00000493271 NOL4O94818 638 aa11.84□□□□□ -0.51
SNRNP200-207ENST00000493271 KRT18P05783 430 aaKnown RBP11.84□□□□□ -0.51
SNRNP200-207ENST00000493271 CEACAM1P13688 526 aa11.84□□□□□ -0.51
SNRNP200-207ENST00000493271 DPP6P42658 865 aa11.84□□□□□ -0.51
SNRNP200-207ENST00000493271 IFNAR2P48551 515 aa11.84□□□□□ -0.51
SNRNP200-207ENST00000493271 WSCD1Q658N2 575 aa11.84□□□□□ -0.51
SNRNP200-207ENST00000493271 TXNDC8Q6A555 127 aa11.84□□□□□ -0.51
SNRNP200-207ENST00000493271 UNQ6494/PRO21346Q6UXR6 183 aa11.84□□□□□ -0.51
SNRNP200-207ENST00000493271 LRRTM3Q86VH5 581 aa11.84□□□□□ -0.51
SNRNP200-207ENST00000493271 TMEM130Q8N3G9 435 aa11.84□□□□□ -0.51
SNRNP200-207ENST00000493271 KDF1Q8NAX2 398 aaPredicted RBP11.84□□□□□ -0.51
SNRNP200-207ENST00000493271 TSTD1Q8NFU3 115 aa11.84□□□□□ -0.51
SNRNP200-207ENST00000493271 FUBP3Q96I24 572 aaKnown RBP eCLIP11.84□□□□□ -0.51
SNRNP200-207ENST00000493271 DUS2Q9NX74 493 aaKnown RBP11.84□□□□□ -0.51
SNRNP200-207ENST00000493271 AGO2Q9UKV8 859 aaKnown RBP11.84□□□□□ -0.51
SNRNP200-207ENST00000493271 NPHP3-ACAD11A0A0J9YXS1 232 aa11.83□□□□□ -0.52
SNRNP200-207ENST00000493271 LNP1A1A4G5 178 aa11.83□□□□□ -0.52
SNRNP200-207ENST00000493271 NFATC1O95644 943 aa11.83□□□□□ -0.52
SNRNP200-207ENST00000493271 BMP15O95972 392 aa11.83□□□□□ -0.52
SNRNP200-207ENST00000493271 CKMP06732 381 aa11.83□□□□□ -0.52
SNRNP200-207ENST00000493271 ARSAP15289 507 aa11.83□□□□□ -0.52
SNRNP200-207ENST00000493271 NMT1P30419 496 aaKnown RBP11.83□□□□□ -0.52
SNRNP200-207ENST00000493271 HOXC13P31276 330 aa11.83□□□□□ -0.52
SNRNP200-207ENST00000493271 GBP1P32455 592 aa11.83□□□□□ -0.52
SNRNP200-207ENST00000493271 ACOT2P49753 483 aa11.83□□□□□ -0.52
SNRNP200-207ENST00000493271 MYL7Q01449 175 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms