RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 C2CD2Q9Y426 696 aa11.89□□□□□ -0.51
SND1-215ENST00000492772 NPHP3-ACAD11A0A0J9YXS1 232 aa11.88□□□□□ -0.51
SND1-215ENST00000492772 OTOL1A6NHN0 477 aaPredicted RBP11.88□□□□□ -0.51
SND1-215ENST00000492772 CYB561D2O14569 222 aa11.88□□□□□ -0.51
SND1-215ENST00000492772 SLC26A4O43511 780 aa11.88□□□□□ -0.51
SND1-215ENST00000492772 FAM13AO94988 1023 aa11.88□□□□□ -0.51
SND1-215ENST00000492772 F11P03951 625 aa11.88□□□□□ -0.51
SND1-215ENST00000492772 CSH1P0DML2 217 aa11.88□□□□□ -0.51
SND1-215ENST00000492772 CSH2P0DML3 217 aa11.88□□□□□ -0.51
SND1-215ENST00000492772 ARSAP15289 507 aa11.88□□□□□ -0.51
SND1-215ENST00000492772 HMGA1P17096 107 aaKnown RBP11.88□□□□□ -0.51
SND1-215ENST00000492772 NOVA1P51513 510 aaKnown RBP11.88□□□□□ -0.51
SND1-215ENST00000492772 SV2CQ496J9 727 aa11.88□□□□□ -0.51
SND1-215ENST00000492772 RILPL1Q5EBL4 403 aa11.88□□□□□ -0.51
SND1-215ENST00000492772 DAB2IPQ5VWQ8 1189 aa11.88□□□□□ -0.51
SND1-215ENST00000492772 TCEAL6Q6IPX3 200 aa11.88□□□□□ -0.51
SND1-215ENST00000492772 UNQ6494/PRO21346Q6UXR6 183 aa11.88□□□□□ -0.51
SND1-215ENST00000492772 TMEM150AQ86TG1 271 aa11.88□□□□□ -0.51
SND1-215ENST00000492772 MON1AQ86VX9 555 aa11.88□□□□□ -0.51
SND1-215ENST00000492772 RPLP0P6Q8NHW5 317 aa11.88□□□□□ -0.51
SND1-215ENST00000492772 CCDC26Q8TAB7 109 aa11.88□□□□□ -0.51
SND1-215ENST00000492772 TCEAL3Q969E4 200 aa11.88□□□□□ -0.51
SND1-215ENST00000492772 ZNF560Q96MR9 790 aa11.88□□□□□ -0.51
SND1-215ENST00000492772 REEP2Q9BRK0 252 aa11.88□□□□□ -0.51
SND1-215ENST00000492772 PARVGQ9HBI0 331 aa11.88□□□□□ -0.51
SND1-215ENST00000492772 UXTQ9UBK9 157 aaPredicted RBP11.88□□□□□ -0.51
SND1-215ENST00000492772 EBF1Q9UH73 591 aa11.88□□□□□ -0.51
SND1-215ENST00000492772 PCDHB5Q9Y5E4 795 aa11.88□□□□□ -0.51
SND1-215ENST00000492772 HELZP42694 1942 aaKnown RBP11.88□□□□□ -0.51
SND1-215ENST00000492772 NUP205Q92621 2012 aa11.87□□□□□ -0.51
SND1-215ENST00000492772 SDK1Q7Z5N4 2213 aa11.87□□□□□ -0.51
SND1-215ENST00000492772 BCLAF3A2AJT9 711 aaKnown RBP11.87□□□□□ -0.51
SND1-215ENST00000492772 VWA3AA6NCI4 1184 aa11.87□□□□□ -0.51
SND1-215ENST00000492772 CAVIN2O95810 425 aa11.87□□□□□ -0.51
SND1-215ENST00000492772 NMT1P30419 496 aaKnown RBP11.87□□□□□ -0.51
SND1-215ENST00000492772 GJA4P35212 333 aa11.87□□□□□ -0.51
SND1-215ENST00000492772 GALK1P51570 392 aa11.87□□□□□ -0.51
SND1-215ENST00000492772 ZNF131P52739 623 aa11.87□□□□□ -0.51
SND1-215ENST00000492772 TSPY1Q01534 308 aa11.87□□□□□ -0.51
SND1-215ENST00000492772 POU5F1Q01860 360 aaKnown RBP11.87□□□□□ -0.51
SND1-215ENST00000492772 CREB5Q02930 508 aa11.87□□□□□ -0.51
SND1-215ENST00000492772 ZNF252P-AS1Q0IIN9 211 aa11.87□□□□□ -0.51
SND1-215ENST00000492772 DMC1Q14565 340 aa11.87□□□□□ -0.51
SND1-215ENST00000492772 MTF1Q14872 753 aa11.87□□□□□ -0.51
SND1-215ENST00000492772 NFE2Q16621 373 aaPredicted RBP11.87□□□□□ -0.51
SND1-215ENST00000492772 ARSHQ5FYA8 562 aa11.87□□□□□ -0.51
SND1-215ENST00000492772 ARL6IP4Q66PJ3 421 aaKnown RBP11.87□□□□□ -0.51
SND1-215ENST00000492772 TXNDC8Q6A555 127 aa11.87□□□□□ -0.51
SND1-215ENST00000492772 SLC39A4Q6P5W5 647 aa11.87□□□□□ -0.51
SND1-215ENST00000492772 GPBP1Q86WP2 473 aa11.87□□□□□ -0.51
SND1-215ENST00000492772 MYCT1Q8N699 235 aa11.87□□□□□ -0.51
SND1-215ENST00000492772 LEO1Q8WVC0 666 aaPredicted RBP11.87□□□□□ -0.51
SND1-215ENST00000492772 CD101Q93033 1021 aa11.87□□□□□ -0.51
SND1-215ENST00000492772 ATP2A3Q93084 1043 aa11.87□□□□□ -0.51
SND1-215ENST00000492772 PLIN2Q99541 437 aa11.87□□□□□ -0.51
SND1-215ENST00000492772 TMEM206Q9H813 350 aa11.87□□□□□ -0.51
SND1-215ENST00000492772 DPP3Q9NY33 737 aa11.87□□□□□ -0.51
SND1-215ENST00000492772 KIF3AQ9Y496 699 aa11.87□□□□□ -0.51
SND1-215ENST00000492772 LNP1A1A4G5 178 aa11.86□□□□□ -0.51
SND1-215ENST00000492772 TMEM8BA6NDV4 472 aa11.86□□□□□ -0.51
SND1-215ENST00000492772 C4orf47A7E2U8 309 aa11.86□□□□□ -0.51
SND1-215ENST00000492772 TRAK2O60296 914 aa11.86□□□□□ -0.51
SND1-215ENST00000492772 TBCAO75347 108 aaKnown RBP11.86□□□□□ -0.51
SND1-215ENST00000492772 KRT18P05783 430 aaKnown RBP11.86□□□□□ -0.51
SND1-215ENST00000492772 GBP1P32455 592 aa11.86□□□□□ -0.51
SND1-215ENST00000492772 PNPLA4P41247 253 aa11.86□□□□□ -0.51
SND1-215ENST00000492772 IFNAR2P48551 515 aa11.86□□□□□ -0.51
SND1-215ENST00000492772 RPL10AP62906 217 aaKnown RBP11.86□□□□□ -0.51
SND1-215ENST00000492772 FAM160A1Q05DH4 1040 aa11.86□□□□□ -0.51
SND1-215ENST00000492772 USP4Q13107 963 aa11.86□□□□□ -0.51
SND1-215ENST00000492772 ZNF77Q15935 545 aa11.86□□□□□ -0.51
SND1-215ENST00000492772 WSCD1Q658N2 575 aa11.86□□□□□ -0.51
SND1-215ENST00000492772 ADALQ6DHV7 355 aa11.86□□□□□ -0.51
SND1-215ENST00000492772 SLFN12LQ6IEE8 588 aa11.86□□□□□ -0.51
SND1-215ENST00000492772 LRRTM3Q86VH5 581 aa11.86□□□□□ -0.51
SND1-215ENST00000492772 NT5DC4Q86YG4 428 aa11.86□□□□□ -0.51
SND1-215ENST00000492772 TSTD1Q8NFU3 115 aa11.86□□□□□ -0.51
SND1-215ENST00000492772 RIN3Q8TB24 985 aa11.86□□□□□ -0.51
SND1-215ENST00000492772 OSCP1Q8WVF1 389 aa11.86□□□□□ -0.51
SND1-215ENST00000492772 CALML4Q96GE6 196 aa11.86□□□□□ -0.51
SND1-215ENST00000492772 TRMT2BQ96GJ1 504 aaKnown RBP11.86□□□□□ -0.51
SND1-215ENST00000492772 AK8Q96MA6 479 aa11.86□□□□□ -0.51
SND1-215ENST00000492772 ECT2Q9H8V3 914 aa11.86□□□□□ -0.51
SND1-215ENST00000492772 FBRSL1Q9HCM7 1045 aaKnown RBP11.86□□□□□ -0.51
SND1-215ENST00000492772 ABCB6Q9NP58 842 aa11.86□□□□□ -0.51
SND1-215ENST00000492772 DUS2Q9NX74 493 aaKnown RBP11.86□□□□□ -0.51
SND1-215ENST00000492772 MAGED2Q9UNF1 606 aaPredicted RBP11.86□□□□□ -0.51
SND1-215ENST00000492772 ATG2BQ96BY7 2078 aa11.86□□□□□ -0.51
SND1-215ENST00000492772 ZZEF1O43149 2961 aa11.86□□□□□ -0.51
SND1-215ENST00000492772 TRAV19A0A0A6YYK7 116 aa11.85□□□□□ -0.51
SND1-215ENST00000492772 KPNA7A9QM74 516 aa11.85□□□□□ -0.51
SND1-215ENST00000492772 DCLK1O15075 740 aa11.85□□□□□ -0.51
SND1-215ENST00000492772 PRPF40AO75400 957 aaKnown RBP11.85□□□□□ -0.51
SND1-215ENST00000492772 NOL4O94818 638 aa11.85□□□□□ -0.51
SND1-215ENST00000492772 IL18RAPO95256 599 aa11.85□□□□□ -0.51
SND1-215ENST00000492772 CKMP06732 381 aa11.85□□□□□ -0.51
SND1-215ENST00000492772 USP17L7P0C7H9 530 aa11.85□□□□□ -0.51
SND1-215ENST00000492772 ACOT2P49753 483 aa11.85□□□□□ -0.51
SND1-215ENST00000492772 CDR1P51861 262 aa11.85□□□□□ -0.51
SND1-215ENST00000492772 DGKEP52429 567 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms