RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 RHOT2Q8IXI1 618 aa3.62□□□□□ -1.83
HMGB1P30-201ENST00000492455 SLC44A3Q8N4M1 653 aa3.62□□□□□ -1.83
HMGB1P30-201ENST00000492455 FITM2Q8N6M3 262 aa3.62□□□□□ -1.83
HMGB1P30-201ENST00000492455 Q8NA96 180 aa3.62□□□□□ -1.83
HMGB1P30-201ENST00000492455 PDPRQ8NCN5 879 aa3.62□□□□□ -1.83
HMGB1P30-201ENST00000492455 CPEB3Q8NE35 698 aaKnown RBP3.62□□□□□ -1.83
HMGB1P30-201ENST00000492455 TBC1D15Q8TC07 691 aa3.62□□□□□ -1.83
HMGB1P30-201ENST00000492455 PARD3BQ8TEW8 1205 aa3.62□□□□□ -1.83
HMGB1P30-201ENST00000492455 PHKBQ93100 1093 aa3.62□□□□□ -1.83
HMGB1P30-201ENST00000492455 PHACTR3Q96KR7 559 aa3.62□□□□□ -1.83
HMGB1P30-201ENST00000492455 ZNF778Q96MU6 729 aa3.62□□□□□ -1.83
HMGB1P30-201ENST00000492455 TINAGL1Q9GZM7 467 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P30-201ENST00000492455 BTBD1Q9H0C5 482 aa3.62□□□□□ -1.83
HMGB1P30-201ENST00000492455 BRD9Q9H8M2 597 aa3.62□□□□□ -1.83
HMGB1P30-201ENST00000492455 SARS2Q9NP81 518 aaKnown RBP3.62□□□□□ -1.83
HMGB1P30-201ENST00000492455 PIH1D1Q9NWS0 290 aaKnown RBP3.62□□□□□ -1.83
HMGB1P30-201ENST00000492455 ETAA1Q9NY74 926 aa3.62□□□□□ -1.83
HMGB1P30-201ENST00000492455 POGKQ9P215 609 aa3.62□□□□□ -1.83
HMGB1P30-201ENST00000492455 COL20A1Q9P218 1284 aa3.62□□□□□ -1.83
HMGB1P30-201ENST00000492455 TPCN1Q9ULQ1 816 aa3.62□□□□□ -1.83
HMGB1P30-201ENST00000492455 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P30-201ENST00000492455 UNC119BA6NIH7 251 aa3.61□□□□□ -1.83
HMGB1P30-201ENST00000492455 MARCH11A6NNE9 402 aa3.61□□□□□ -1.83
HMGB1P30-201ENST00000492455 ISM1B1AKI9 464 aa3.61□□□□□ -1.83
HMGB1P30-201ENST00000492455 ANXA1P04083 346 aa3.61□□□□□ -1.83
HMGB1P30-201ENST00000492455 CKBP12277 381 aa3.61□□□□□ -1.83
HMGB1P30-201ENST00000492455 MGAT1P26572 445 aa3.61□□□□□ -1.83
HMGB1P30-201ENST00000492455 CASP5P51878 434 aa3.61□□□□□ -1.83
HMGB1P30-201ENST00000492455 ZNF135P52742 658 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P30-201ENST00000492455 SUMO3P55854 103 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P30-201ENST00000492455 RNASE9P60153 205 aaKnown RBP3.61□□□□□ -1.83
HMGB1P30-201ENST00000492455 HTRA4P83105 476 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P30-201ENST00000492455 CNGA2Q16280 664 aa3.61□□□□□ -1.83
HMGB1P30-201ENST00000492455 TMPRSS9Q7Z410 1059 aa3.61□□□□□ -1.83
HMGB1P30-201ENST00000492455 RNF152Q8N8N0 203 aa3.61□□□□□ -1.83
HMGB1P30-201ENST00000492455 OR56A1Q8NGH5 318 aa3.61□□□□□ -1.83
HMGB1P30-201ENST00000492455 SPATA3Q8NHX4 192 aa3.61□□□□□ -1.83
HMGB1P30-201ENST00000492455 NUP133Q8WUM0 1156 aa3.61□□□□□ -1.83
HMGB1P30-201ENST00000492455 PMM1Q92871 262 aa3.61□□□□□ -1.83
HMGB1P30-201ENST00000492455 SCAMP4Q969E2 229 aa3.61□□□□□ -1.83
HMGB1P30-201ENST00000492455 MARS2Q96GW9 593 aaKnown RBP3.61□□□□□ -1.83
HMGB1P30-201ENST00000492455 MSLNLQ96KJ4 702 aa3.61□□□□□ -1.83
HMGB1P30-201ENST00000492455 TBCBQ99426 244 aa3.61□□□□□ -1.83
HMGB1P30-201ENST00000492455 ZSWIM1Q9BR11 485 aa3.61□□□□□ -1.83
HMGB1P30-201ENST00000492455 GNL3LQ9NVN8 582 aaKnown RBP3.61□□□□□ -1.83
HMGB1P30-201ENST00000492455 CTTNBP2NLQ9P2B4 639 aa3.61□□□□□ -1.83
HMGB1P30-201ENST00000492455 CFAP97Q9P2B7 532 aa3.61□□□□□ -1.83
HMGB1P30-201ENST00000492455 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.61□□□□□ -1.83
HMGB1P30-201ENST00000492455 AATKQ6ZMQ8 1374 aa3.61□□□□□ -1.83
HMGB1P30-201ENST00000492455 A0A087WWL8 130 aa3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 TRIM43BA6NCK2 446 aa3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 TMEM233B4DJY2 109 aa3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 KPNA5O15131 536 aa3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 PLIN1O60240 522 aa3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 MGEA5O60502 916 aa3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 PEX14O75381 377 aa3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 UNC5CO95185 931 aa3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 KIF20AO95235 890 aa3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 GNAI3P08754 354 aa3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 NBPF7P0C2Y1 421 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 ITGAMP11215 1152 aa3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 PIM1P11309 404 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 TSHRP16473 764 aa3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 FGFR4P22455 802 aa3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 GNAI1P63096 354 aa3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 OCA2Q04671 838 aa3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 ZNF543Q08ER8 600 aa3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 CTBP1Q13363 440 aa3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 HABP2Q14520 560 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 LONRF1Q17RB8 773 aa3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 C3orf38Q5JPI3 329 aa3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 TSHZ3Q63HK5 1081 aa3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 B3GNTL1Q67FW5 361 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 PPP4R4Q6NUP7 873 aa3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 ARMC6Q6NXE6 501 aa3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 CFAP52Q8N1V2 620 aa3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 PCSK9Q8NBP7 692 aaKnown RBP3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 SLC17A8Q8NDX2 589 aa3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 WASF1Q92558 559 aa3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 TRIM43Q96BQ3 446 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 IMPG2Q9BZV3 1241 aa3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 LRRC27Q9C0I9 530 aa3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 NUP62CLQ9H1M0 184 aa3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 SEMA4GQ9NTN9 838 aa3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 DKK2Q9UBU2 259 aa3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 CORO2BQ9UQ03 480 aa3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 USP15Q9Y4E8 981 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 CNTNAP2Q9UHC6 1331 aa3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 COL3A1P02461 1466 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P30-201ENST00000492455 A0A1B0GTW7 788 aa3.59□□□□□ -1.83
HMGB1P30-201ENST00000492455 M0QYG6 137 aa3.59□□□□□ -1.83
HMGB1P30-201ENST00000492455 BTN3A1O00481 513 aa3.59□□□□□ -1.83
HMGB1P30-201ENST00000492455 DCLK1O15075 740 aa3.59□□□□□ -1.83
HMGB1P30-201ENST00000492455 SUN1O94901 812 aa3.59□□□□□ -1.83
HMGB1P30-201ENST00000492455 IL1R1P14778 569 aa3.59□□□□□ -1.83
HMGB1P30-201ENST00000492455 BRAFP15056 766 aa3.59□□□□□ -1.83
HMGB1P30-201ENST00000492455 HTR3AP46098 478 aa3.59□□□□□ -1.83
HMGB1P30-201ENST00000492455 SLC11A2P49281 568 aa3.59□□□□□ -1.83
HMGB1P30-201ENST00000492455 UCP3P55916 312 aa3.59□□□□□ -1.83
HMGB1P30-201ENST00000492455 RPS16P62249 146 aaKnown RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms