RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 C12orf29Q8N999 325 aa13.13□□□□□ -0.31
HMGN1-220ENST00000492280 GRK7Q8WTQ7 553 aa13.13□□□□□ -0.31
HMGN1-220ENST00000492280 ANKRD36BP1Q96IX9 119 aa13.13□□□□□ -0.31
HMGN1-220ENST00000492280 PAIP2Q9BPZ3 127 aaKnown RBP13.13□□□□□ -0.31
HMGN1-220ENST00000492280 ELOVL4Q9GZR5 314 aa13.13□□□□□ -0.31
HMGN1-220ENST00000492280 CNOT10Q9H9A5 744 aaKnown RBP13.13□□□□□ -0.31
HMGN1-220ENST00000492280 IFT122Q9HBG6 1241 aa13.13□□□□□ -0.31
HMGN1-220ENST00000492280 AGTPBP1Q9UPW5 1226 aa13.13□□□□□ -0.31
HMGN1-220ENST00000492280 hCG_1818297A0A087WSY0 165 aa13.13□□□□□ -0.31
HMGN1-220ENST00000492280 TCP11X1B4DZS4 312 aa13.13□□□□□ -0.31
HMGN1-220ENST00000492280 M0QYV0 167 aa13.13□□□□□ -0.31
HMGN1-220ENST00000492280 ACKR2O00590 384 aa13.13□□□□□ -0.31
HMGN1-220ENST00000492280 STAG3L1P0CL83 205 aa13.13□□□□□ -0.31
HMGN1-220ENST00000492280 POLR2BP30876 1174 aaKnown RBP13.13□□□□□ -0.31
HMGN1-220ENST00000492280 ADCYAP1R1P41586 468 aa13.13□□□□□ -0.31
HMGN1-220ENST00000492280 RGS7P49802 495 aa13.13□□□□□ -0.31
HMGN1-220ENST00000492280 MOGSQ13724 837 aa13.13□□□□□ -0.31
HMGN1-220ENST00000492280 MXD4Q14582 209 aaPredicted RBP13.13□□□□□ -0.31
HMGN1-220ENST00000492280 SPDYCQ5MJ68 293 aa13.13□□□□□ -0.31
HMGN1-220ENST00000492280 ANKRD22Q5VYY1 191 aa13.13□□□□□ -0.31
HMGN1-220ENST00000492280 CCDC62Q6P9F0 684 aa13.13□□□□□ -0.31
HMGN1-220ENST00000492280 TRMT10CQ7L0Y3 403 aaKnown RBP13.13□□□□□ -0.31
HMGN1-220ENST00000492280 ARMCX2Q7L311 632 aa13.13□□□□□ -0.31
HMGN1-220ENST00000492280 RUNDC3BQ96NL0 473 aa13.13□□□□□ -0.31
HMGN1-220ENST00000492280 RPF1Q9H9Y2 349 aaKnown RBP13.13□□□□□ -0.31
HMGN1-220ENST00000492280 PTPRHQ9HD43 1115 aa13.13□□□□□ -0.31
HMGN1-220ENST00000492280 ADARB2Q9NS39 739 aaKnown RBP13.13□□□□□ -0.31
HMGN1-220ENST00000492280 IGKV6-21A0A0C4DH24 114 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 CITO14578 2027 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 C22orf31O95567 290 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 CALB1P05937 261 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 TGFB3P10600 412 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 KRT3P12035 628 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 BRAFP15056 766 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 GBP1P32455 592 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 RAD23BP54727 409 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 MMRN1Q13201 1228 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 ZNF667Q5HYK9 610 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 NPNTQ6UXI9 565 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 ERO1BQ86YB8 467 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 ZBED8Q8IZ13 594 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 ACTL9Q8TC94 416 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 AFG1LQ8WV93 481 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 SPOCK2Q92563 424 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 FAM167AQ96KS9 214 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 HAUS2Q9NVX0 235 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 PPEF2O14830 753 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 PROZP22891 400 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 CDKN2BP42772 138 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 MAGEA4P43358 317 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 OTUD4Q01804 1114 aaKnown RBP13.12□□□□□ -0.31
HMGN1-220ENST00000492280 AMHR2Q16671 573 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 C15orf59Q2T9L4 293 aaPredicted RBP13.12□□□□□ -0.31
HMGN1-220ENST00000492280 FAM133BQ5BKY9 247 aaKnown RBP13.12□□□□□ -0.31
HMGN1-220ENST00000492280 GLRA4Q5JXX5 417 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 PPP1R15BQ5SWA1 713 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 TSHZ1Q6ZSZ6 1077 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 MICALCLQ6ZW33 695 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 C4orf33Q8N1A6 199 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 CCDC89Q8N998 374 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 SLC4A11Q8NBS3 891 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 VCPIP1Q96JH7 1222 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 FZD8Q9H461 694 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 VPS37BQ9H9H4 285 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 ABCF3Q9NUQ8 709 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 GPATCH2LQ9NWQ4 482 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 NAALADL1Q9UQQ1 740 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 HES2Q9Y543 173 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 MYO18AQ92614 2054 aaKnown RBP13.12□□□□□ -0.31
HMGN1-220ENST00000492280 DOCK3Q8IZD9 2030 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 TCRBV7S3A2A0A539 114 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 C5orf60A6NFR6 353 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 CST8O60676 142 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 LGR5O75473 907 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 LGALS2P05162 132 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 ARF4P18085 180 aaPredicted RBP13.12□□□□□ -0.31
HMGN1-220ENST00000492280 GCLCP48506 637 aaPredicted RBP13.12□□□□□ -0.31
HMGN1-220ENST00000492280 MAP1SQ66K74 1059 aaPredicted RBP13.12□□□□□ -0.31
HMGN1-220ENST00000492280 HIBCHQ6NVY1 386 aaPredicted RBP13.12□□□□□ -0.31
HMGN1-220ENST00000492280 FAM47EQ6ZV65 393 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 C3orf20Q8ND61 904 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 TCP11Q8WWU5 503 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 CALN1Q9BXU9 219 aa13.12□□□□□ -0.31
HMGN1-220ENST00000492280 C12orf65Q9H3J6 166 aaKnown RBP13.12□□□□□ -0.31
HMGN1-220ENST00000492280 ANKRD20A8PQ5CZ79 823 aa13.11□□□□□ -0.31
HMGN1-220ENST00000492280 TNFAIP8L3Q5GJ75 292 aa13.11□□□□□ -0.31
HMGN1-220ENST00000492280 NUGGCQ68CJ6 796 aa13.11□□□□□ -0.31
HMGN1-220ENST00000492280 ANKRD13AQ8IZ07 590 aa13.11□□□□□ -0.31
HMGN1-220ENST00000492280 MAIP1Q8WWC4 291 aa13.11□□□□□ -0.31
HMGN1-220ENST00000492280 RBM41Q96IZ5 413 aaKnown RBP13.11□□□□□ -0.31
HMGN1-220ENST00000492280 KCNG1Q9UIX4 513 aa13.11□□□□□ -0.31
HMGN1-220ENST00000492280 CEP83Q9Y592 693 aa13.11□□□□□ -0.31
HMGN1-220ENST00000492280 DICER1Q9UPY3 1922 aaKnown RBP13.11□□□□□ -0.31
HMGN1-220ENST00000492280 EXOC1LA0A1B0GW35 172 aa13.11□□□□□ -0.31
HMGN1-220ENST00000492280 SPDYE5A6NIY4 337 aa13.11□□□□□ -0.31
HMGN1-220ENST00000492280 MICAL2O94851 1124 aa13.11□□□□□ -0.31
HMGN1-220ENST00000492280 CYP3A5P20815 502 aa13.11□□□□□ -0.31
HMGN1-220ENST00000492280 ABCD1P33897 745 aa13.11□□□□□ -0.31
HMGN1-220ENST00000492280 SLC25A11Q02978 314 aaKnown RBP13.11□□□□□ -0.31
HMGN1-220ENST00000492280 MSS51Q4VC12 460 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms