RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 DPYDQ12882 1025 aa13.63□□□□□ -0.23
SEC61A1-206ENST00000491668 STK4Q13043 487 aa13.63□□□□□ -0.23
SEC61A1-206ENST00000491668 FZD5Q13467 585 aa13.63□□□□□ -0.23
SEC61A1-206ENST00000491668 MGAT5BQ3V5L5 792 aa13.63□□□□□ -0.23
SEC61A1-206ENST00000491668 ELOA2Q8IYF1 753 aaPredicted RBP13.63□□□□□ -0.23
SEC61A1-206ENST00000491668 MAML2Q8IZL2 1156 aaPredicted RBP13.63□□□□□ -0.23
SEC61A1-206ENST00000491668 RDH13Q8NBN7 331 aa13.63□□□□□ -0.23
SEC61A1-206ENST00000491668 KIAA0895Q8NCT3 520 aa13.63□□□□□ -0.23
SEC61A1-206ENST00000491668 STKLD1Q8NE28 680 aa13.63□□□□□ -0.23
SEC61A1-206ENST00000491668 PLEKHO2Q8TD55 490 aa13.63□□□□□ -0.23
SEC61A1-206ENST00000491668 GIPC2Q8TF65 315 aa13.63□□□□□ -0.23
SEC61A1-206ENST00000491668 KBTBD7Q8WVZ9 684 aa13.63□□□□□ -0.23
SEC61A1-206ENST00000491668 ZNF516Q92618 1163 aa13.63□□□□□ -0.23
SEC61A1-206ENST00000491668 ACBD6Q9BR61 282 aa13.63□□□□□ -0.23
SEC61A1-206ENST00000491668 IRF2BPLQ9H1B7 796 aa13.63□□□□□ -0.23
SEC61A1-206ENST00000491668 RMND1Q9NWS8 449 aa13.63□□□□□ -0.23
SEC61A1-206ENST00000491668 DDX43Q9NXZ2 648 aaKnown RBP13.63□□□□□ -0.23
SEC61A1-206ENST00000491668 ABI2Q9NYB9 513 aaPredicted RBP13.63□□□□□ -0.23
SEC61A1-206ENST00000491668 NME7Q9Y5B8 376 aa13.63□□□□□ -0.23
SEC61A1-206ENST00000491668 SNX9Q9Y5X1 595 aa13.63□□□□□ -0.23
SEC61A1-206ENST00000491668 UBE4BO95155 1302 aa13.63□□□□□ -0.23
SEC61A1-206ENST00000491668 FAM186AA6NE01 2351 aa13.63□□□□□ -0.23
SEC61A1-206ENST00000491668 EP300Q09472 2414 aaPredicted RBP13.62□□□□□ -0.23
SEC61A1-206ENST00000491668 PTPRZ1P23471 2315 aaPredicted RBP13.62□□□□□ -0.23
SEC61A1-206ENST00000491668 HEPACAM2A8MVW5 462 aa13.62□□□□□ -0.23
SEC61A1-206ENST00000491668 ATP2C2O75185 946 aa13.62□□□□□ -0.23
SEC61A1-206ENST00000491668 CST3P01034 146 aaPredicted RBP13.62□□□□□ -0.23
SEC61A1-206ENST00000491668 GABRR2P28476 465 aa13.62□□□□□ -0.23
SEC61A1-206ENST00000491668 CYP2J2P51589 502 aa13.62□□□□□ -0.23
SEC61A1-206ENST00000491668 CYP24A1Q07973 514 aa13.62□□□□□ -0.23
SEC61A1-206ENST00000491668 PSMD6Q15008 389 aa13.62□□□□□ -0.23
SEC61A1-206ENST00000491668 DUOXA2Q1HG44 320 aa13.62□□□□□ -0.23
SEC61A1-206ENST00000491668 KMT5BQ4FZB7 885 aa13.62□□□□□ -0.23
SEC61A1-206ENST00000491668 TPRG1Q6ZUI0 275 aa13.62□□□□□ -0.23
SEC61A1-206ENST00000491668 ASCL5Q7RTU5 278 aa13.62□□□□□ -0.23
SEC61A1-206ENST00000491668 TRAPPC11Q7Z392 1133 aa13.62□□□□□ -0.23
SEC61A1-206ENST00000491668 FRMD5Q7Z6J6 570 aa13.62□□□□□ -0.23
SEC61A1-206ENST00000491668 WDR49Q8IV35 697 aa13.62□□□□□ -0.23
SEC61A1-206ENST00000491668 ARID3BQ8IVW6 561 aaPredicted RBP13.62□□□□□ -0.23
SEC61A1-206ENST00000491668 C12orf56Q8IXR9 622 aa13.62□□□□□ -0.23
SEC61A1-206ENST00000491668 TMEM86AQ8N2M4 240 aa13.62□□□□□ -0.23
SEC61A1-206ENST00000491668 TOP6BLQ8N6T0 577 aa13.62□□□□□ -0.23
SEC61A1-206ENST00000491668 SPPL2BQ8TCT7 592 aa13.62□□□□□ -0.23
SEC61A1-206ENST00000491668 C2orf15Q8WU43 125 aaKnown RBP13.62□□□□□ -0.23
SEC61A1-206ENST00000491668 ERCC4Q92889 916 aaPredicted RBP13.62□□□□□ -0.23
SEC61A1-206ENST00000491668 HPDLQ96IR7 371 aa13.62□□□□□ -0.23
SEC61A1-206ENST00000491668 SHDQ96IW2 340 aa13.62□□□□□ -0.23
SEC61A1-206ENST00000491668 TRMT61BQ9BVS5 477 aaKnown RBP13.62□□□□□ -0.23
SEC61A1-206ENST00000491668 LTB4R2Q9NPC1 389 aa13.62□□□□□ -0.23
SEC61A1-206ENST00000491668 MIA3Q5JRA6 1907 aa13.62□□□□□ -0.23
SEC61A1-206ENST00000491668 TICRRQ7Z2Z1 1910 aa13.62□□□□□ -0.23
SEC61A1-206ENST00000491668 MYBPHLA2RUH7 354 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 FAM170BA6NMN3 283 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 HUS1O60921 280 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 PRAMEF12O95522 483 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 TMEM191BP0C7N4 346 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 PSMC3P17980 439 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 RFX1P22670 979 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 CYP2F1P24903 491 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 LMO2P25791 158 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 TARSP26639 723 aaKnown RBP13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 GDI1P31150 447 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 SNRPFP62306 86 aaKnown RBP13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 CYP4F8P98187 520 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 FCHO2Q0JRZ9 810 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 SMARCB1Q12824 385 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 PSMD2Q13200 908 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 SURF1Q15526 300 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 KNOP1Q1ED39 458 aaKnown RBP13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 KLHL40Q2TBA0 621 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 INTS6LQ5JSJ4 861 aaKnown RBP13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 CCDC183Q5T5S1 534 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 SDHAF4Q5VUM1 108 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 CAVIN1Q6NZI2 390 aaKnown RBP13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 ITIH5Q86UX2 942 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 MFSD6LQ8IWD5 586 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 DCP1BQ8IZD4 617 aaKnown RBP13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 ADGRF2Q8IZF7 708 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 XXYLT1Q8NBI6 393 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 DNASE1L2Q92874 299 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 CLDN23Q96B33 292 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 CCDC127Q96BQ5 260 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 ANKRD36BP1Q96IX9 119 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 GSDMAQ96QA5 445 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 PI4K2AQ9BTU6 479 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 SLC46A2Q9BY10 475 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 GPR88Q9GZN0 384 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 ATXN3LQ9H3M9 355 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 SLITRK6Q9H5Y7 841 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 BRD9Q9H8M2 597 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 KIAA1586Q9HCI6 787 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 TRPV5Q9NQA5 729 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 DMAC2Q9NW81 257 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 GTF3C4Q9UKN8 822 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 PCDHB5Q9Y5E4 795 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 PCDHA5Q9Y5H7 936 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 DMXL1Q9Y485 3027 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 GPR179Q6PRD1 2367 aa13.61□□□□□ -0.23
SEC61A1-206ENST00000491668 DENND4CQ5VZ89 1909 aa13.6□□□□□ -0.23
SEC61A1-206ENST00000491668 PATJQ8NI35 1801 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms