RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 L1RE1Q9UN81 338 aa17.76■□□□□ 0.43
PDLIM2-217ENST00000491330 MAGED2Q9UNF1 606 aaPredicted RBP17.76■□□□□ 0.43
PDLIM2-217ENST00000491330 CLIC2O15247 247 aa17.75■□□□□ 0.43
PDLIM2-217ENST00000491330 P4HA1P13674 534 aa17.75■□□□□ 0.43
PDLIM2-217ENST00000491330 ANXA13P27216 316 aa17.75■□□□□ 0.43
PDLIM2-217ENST00000491330 WEE1P30291 646 aa17.75■□□□□ 0.43
PDLIM2-217ENST00000491330 SYKP43405 635 aa17.75■□□□□ 0.43
PDLIM2-217ENST00000491330 RPS9P46781 194 aaKnown RBP17.75■□□□□ 0.43
PDLIM2-217ENST00000491330 PDE6CP51160 858 aa17.75■□□□□ 0.43
PDLIM2-217ENST00000491330 LRRC32Q14392 662 aa17.75■□□□□ 0.43
PDLIM2-217ENST00000491330 VITQ6UXI7 678 aa17.75■□□□□ 0.43
PDLIM2-217ENST00000491330 TRAPPC11Q7Z392 1133 aa17.75■□□□□ 0.43
PDLIM2-217ENST00000491330 FRMD5Q7Z6J6 570 aa17.75■□□□□ 0.43
PDLIM2-217ENST00000491330 TMC8Q8IU68 726 aa17.75■□□□□ 0.43
PDLIM2-217ENST00000491330 CELF5Q8N6W0 485 aaKnown RBP17.75■□□□□ 0.43
PDLIM2-217ENST00000491330 ATRIPQ8WXE1 791 aa17.75■□□□□ 0.43
PDLIM2-217ENST00000491330 SYAP1Q96A49 352 aaPredicted RBP17.75■□□□□ 0.43
PDLIM2-217ENST00000491330 CEP295NLQ96MC4 621 aa17.75■□□□□ 0.43
PDLIM2-217ENST00000491330 ZSWIM3Q96MP5 696 aa17.75■□□□□ 0.43
PDLIM2-217ENST00000491330 CGRRF1Q99675 332 aa17.75■□□□□ 0.43
PDLIM2-217ENST00000491330 FGFBP2Q9BYJ0 223 aa17.75■□□□□ 0.43
PDLIM2-217ENST00000491330 DNAJC25Q9H1X3 360 aa17.75■□□□□ 0.43
PDLIM2-217ENST00000491330 CRISPLD1Q9H336 500 aa17.75■□□□□ 0.43
PDLIM2-217ENST00000491330 MAGEC2Q9UBF1 373 aaPredicted RBP17.75■□□□□ 0.43
PDLIM2-217ENST00000491330 FBXO4Q9UKT5 387 aa17.75■□□□□ 0.43
PDLIM2-217ENST00000491330 FRMD4BQ9Y2L6 1034 aa17.75■□□□□ 0.43
PDLIM2-217ENST00000491330 ZDHHC9Q9Y397 364 aa17.75■□□□□ 0.43
PDLIM2-217ENST00000491330 PIAS3Q9Y6X2 628 aa17.75■□□□□ 0.43
PDLIM2-217ENST00000491330 FAM237AA0A1B0GTK4 181 aa17.74■□□□□ 0.43
PDLIM2-217ENST00000491330 A0A1W2PQ27 194 aa17.74■□□□□ 0.43
PDLIM2-217ENST00000491330 A0A1W2PQ64 194 aa17.74■□□□□ 0.43
PDLIM2-217ENST00000491330 A0A1W2PQD8 194 aa17.74■□□□□ 0.43
PDLIM2-217ENST00000491330 CALUO43852 315 aaPredicted RBP17.74■□□□□ 0.43
PDLIM2-217ENST00000491330 SOAT2O75908 522 aa17.74■□□□□ 0.43
PDLIM2-217ENST00000491330 FCARP24071 287 aa17.74■□□□□ 0.43
PDLIM2-217ENST00000491330 ATICP31939 592 aa17.74■□□□□ 0.43
PDLIM2-217ENST00000491330 NRLP54845 237 aa17.74■□□□□ 0.43
PDLIM2-217ENST00000491330 BIRC3Q13489 604 aa17.74■□□□□ 0.43
PDLIM2-217ENST00000491330 CUL4BQ13620 913 aa17.74■□□□□ 0.43
PDLIM2-217ENST00000491330 BMT2Q1RMZ1 405 aa17.74■□□□□ 0.43
PDLIM2-217ENST00000491330 CFAP221Q4G0U5 840 aa17.74■□□□□ 0.43
PDLIM2-217ENST00000491330 LMBRD2Q68DH5 695 aaPredicted RBP17.74■□□□□ 0.43
PDLIM2-217ENST00000491330 SCN4BQ8IWT1 228 aa17.74■□□□□ 0.43
PDLIM2-217ENST00000491330 C12orf56Q8IXR9 622 aa17.74■□□□□ 0.43
PDLIM2-217ENST00000491330 BPIFB1Q8TDL5 484 aa17.74■□□□□ 0.43
PDLIM2-217ENST00000491330 SCFD1Q8WVM8 642 aa17.74■□□□□ 0.43
PDLIM2-217ENST00000491330 PAGE5Q96GU1 130 aa17.74■□□□□ 0.43
PDLIM2-217ENST00000491330 PHOX2BQ99453 314 aa17.74■□□□□ 0.43
PDLIM2-217ENST00000491330 LPIN3Q9BQK8 851 aa17.74■□□□□ 0.43
PDLIM2-217ENST00000491330 LRRC3Q9BY71 257 aa17.74■□□□□ 0.43
PDLIM2-217ENST00000491330 KIF9Q9HAQ2 790 aa17.74■□□□□ 0.43
PDLIM2-217ENST00000491330 GTF3C4Q9UKN8 822 aa17.74■□□□□ 0.43
PDLIM2-217ENST00000491330 NDRG2Q9UN36 371 aaKnown RBP17.74■□□□□ 0.43
PDLIM2-217ENST00000491330 PIEZO1Q92508 2521 aa17.73■□□□□ 0.43
PDLIM2-217ENST00000491330 KINO60870 393 aaKnown RBP17.73■□□□□ 0.43
PDLIM2-217ENST00000491330 MOSPD3O75425 235 aa17.73■□□□□ 0.43
PDLIM2-217ENST00000491330 VNN2O95498 520 aa17.73■□□□□ 0.43
PDLIM2-217ENST00000491330 LMNAP02545 664 aaKnown RBP17.73■□□□□ 0.43
PDLIM2-217ENST00000491330 PFKFB1P16118 471 aa17.73■□□□□ 0.43
PDLIM2-217ENST00000491330 GNL1P36915 607 aaPredicted RBP17.73■□□□□ 0.43
PDLIM2-217ENST00000491330 CYP24A1Q07973 514 aa17.73■□□□□ 0.43
PDLIM2-217ENST00000491330 SOWAHAQ2M3V2 549 aa17.73■□□□□ 0.43
PDLIM2-217ENST00000491330 ZNF528Q3MIS6 628 aa17.73■□□□□ 0.43
PDLIM2-217ENST00000491330 WDR72Q3MJ13 1102 aa17.73■□□□□ 0.43
PDLIM2-217ENST00000491330 VSTM1Q6UX27 236 aa17.73■□□□□ 0.43
PDLIM2-217ENST00000491330 GAREM2Q75VX8 874 aa17.73■□□□□ 0.43
PDLIM2-217ENST00000491330 LRRTM3Q86VH5 581 aa17.73■□□□□ 0.43
PDLIM2-217ENST00000491330 TTC9BQ8N6N2 239 aa17.73■□□□□ 0.43
PDLIM2-217ENST00000491330 ZSWIM2Q8NEG5 633 aa17.73■□□□□ 0.43
PDLIM2-217ENST00000491330 OR6B3Q8NGW1 331 aa17.73■□□□□ 0.43
PDLIM2-217ENST00000491330 SECISBP2LQ93073 1101 aaKnown RBP17.73■□□□□ 0.43
PDLIM2-217ENST00000491330 SYT15Q9BQS2 421 aa17.73■□□□□ 0.43
PDLIM2-217ENST00000491330 ANK1P16157 1881 aa17.72■□□□□ 0.43
PDLIM2-217ENST00000491330 A0A1B0GVL5 298 aa17.72■□□□□ 0.43
PDLIM2-217ENST00000491330 TRIM66O15016 1216 aa17.72■□□□□ 0.43
PDLIM2-217ENST00000491330 TGFB1I1O43294 461 aa17.72■□□□□ 0.43
PDLIM2-217ENST00000491330 ATF6P18850 670 aa17.72■□□□□ 0.43
PDLIM2-217ENST00000491330 CD72P21854 359 aa17.72■□□□□ 0.43
PDLIM2-217ENST00000491330 ACAT1P24752 427 aaKnown RBP17.72■□□□□ 0.43
PDLIM2-217ENST00000491330 RPL13P26373 211 aaKnown RBP17.72■□□□□ 0.43
PDLIM2-217ENST00000491330 GRIK1P39086 918 aa17.72■□□□□ 0.43
PDLIM2-217ENST00000491330 MAGEA11P43364 429 aa17.72■□□□□ 0.43
PDLIM2-217ENST00000491330 CSTF1Q05048 431 aaKnown RBP17.72■□□□□ 0.43
PDLIM2-217ENST00000491330 FCHO2Q0JRZ9 810 aa17.72■□□□□ 0.43
PDLIM2-217ENST00000491330 RALGPS2Q86X27 583 aaPredicted RBP17.72■□□□□ 0.43
PDLIM2-217ENST00000491330 CMTM8Q8IZV2 173 aa17.72■□□□□ 0.43
PDLIM2-217ENST00000491330 GLIS3Q8NEA6 775 aa17.72■□□□□ 0.43
PDLIM2-217ENST00000491330 OR5B17Q8NGF7 314 aa17.72■□□□□ 0.43
PDLIM2-217ENST00000491330 CLDN23Q96B33 292 aa17.72■□□□□ 0.43
PDLIM2-217ENST00000491330 HINFPQ9BQA5 517 aa17.72■□□□□ 0.43
PDLIM2-217ENST00000491330 FAM126AQ9BYI3 521 aaPredicted RBP17.72■□□□□ 0.43
PDLIM2-217ENST00000491330 DLGAP2Q9P1A6 1054 aa17.72■□□□□ 0.43
PDLIM2-217ENST00000491330 SIX4Q9UIU6 781 aa17.72■□□□□ 0.43
PDLIM2-217ENST00000491330 HPSEQ9Y251 543 aa17.72■□□□□ 0.43
PDLIM2-217ENST00000491330 ATP8B3O60423 1300 aa17.72■□□□□ 0.43
PDLIM2-217ENST00000491330 PRR23AA6NEV1 266 aa17.71■□□□□ 0.43
PDLIM2-217ENST00000491330 PDXKO00764 312 aa17.71■□□□□ 0.43
PDLIM2-217ENST00000491330 GABRDO14764 452 aa17.71■□□□□ 0.43
PDLIM2-217ENST00000491330 PDGFRBP09619 1106 aa17.71■□□□□ 0.43
PDLIM2-217ENST00000491330 SP9P0CG40 484 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms