RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 ARHGAP15Q53QZ3 475 aa20.87■□□□□ 0.93
TNFRSF1B-202ENST00000489921 TXNDC11Q6PKC3 985 aa20.87■□□□□ 0.93
TNFRSF1B-202ENST00000489921 NOC3LQ8WTT2 800 aaKnown RBP20.87■□□□□ 0.93
TNFRSF1B-202ENST00000489921 C7orf25Q9BPX7 421 aa20.87■□□□□ 0.93
TNFRSF1B-202ENST00000489921 PI4K2AQ9BTU6 479 aa20.87■□□□□ 0.93
TNFRSF1B-202ENST00000489921 SMG9Q9H0W8 520 aaKnown RBP20.87■□□□□ 0.93
TNFRSF1B-202ENST00000489921 PCDHGA2Q9Y5H1 932 aa20.87■□□□□ 0.93
TNFRSF1B-202ENST00000489921 MYBPHLA2RUH7 354 aa20.86■□□□□ 0.93
TNFRSF1B-202ENST00000489921 SLC38A8A6NNN8 435 aa20.86■□□□□ 0.93
TNFRSF1B-202ENST00000489921 TULP1O00294 542 aaPredicted RBP20.86■□□□□ 0.93
TNFRSF1B-202ENST00000489921 KIAA0391O15091 583 aaKnown RBP20.86■□□□□ 0.93
TNFRSF1B-202ENST00000489921 EIF3DO15371 548 aaKnown RBP eCLIP20.86■□□□□ 0.93
TNFRSF1B-202ENST00000489921 HUS1O60921 280 aa20.86■□□□□ 0.93
TNFRSF1B-202ENST00000489921 ZSCAN22P10073 491 aaPredicted RBP20.86■□□□□ 0.93
TNFRSF1B-202ENST00000489921 CYP2F1P24903 491 aa20.86■□□□□ 0.93
TNFRSF1B-202ENST00000489921 CDC25CP30307 473 aa20.86■□□□□ 0.93
TNFRSF1B-202ENST00000489921 NLRP12P59046 1061 aa20.86■□□□□ 0.93
TNFRSF1B-202ENST00000489921 PKP1Q13835 747 aa20.86■□□□□ 0.93
TNFRSF1B-202ENST00000489921 INTS6LQ5JSJ4 861 aaKnown RBP20.86■□□□□ 0.93
TNFRSF1B-202ENST00000489921 SDHAF4Q5VUM1 108 aa20.86■□□□□ 0.93
TNFRSF1B-202ENST00000489921 YAF2Q8IY57 180 aa20.86■□□□□ 0.93
TNFRSF1B-202ENST00000489921 TMEM86AQ8N2M4 240 aa20.86■□□□□ 0.93
TNFRSF1B-202ENST00000489921 DCLK2Q8N568 766 aa20.86■□□□□ 0.93
TNFRSF1B-202ENST00000489921 IQUBQ8NA54 791 aa20.86■□□□□ 0.93
TNFRSF1B-202ENST00000489921 CSGALNACT1Q8TDX6 532 aa20.86■□□□□ 0.93
TNFRSF1B-202ENST00000489921 LRRC27Q9C0I9 530 aa20.86■□□□□ 0.93
TNFRSF1B-202ENST00000489921 ZSCAN32Q9NX65 697 aa20.86■□□□□ 0.93
TNFRSF1B-202ENST00000489921 GTSE1Q9NYZ3 720 aa20.86■□□□□ 0.93
TNFRSF1B-202ENST00000489921 HSPBP1Q9NZL4 362 aa20.86■□□□□ 0.93
TNFRSF1B-202ENST00000489921 GTF3C4Q9UKN8 822 aa20.86■□□□□ 0.93
TNFRSF1B-202ENST00000489921 SNX9Q9Y5X1 595 aa20.86■□□□□ 0.93
TNFRSF1B-202ENST00000489921 CACNA1AO00555 2505 aa20.86■□□□□ 0.93
TNFRSF1B-202ENST00000489921 ANAPC1Q9H1A4 1944 aa20.86■□□□□ 0.93
TNFRSF1B-202ENST00000489921 PTPRDP23468 1912 aa20.85■□□□□ 0.93
TNFRSF1B-202ENST00000489921 ZNF233A6NK53 670 aa20.85■□□□□ 0.93
TNFRSF1B-202ENST00000489921 KINO60870 393 aaKnown RBP20.85■□□□□ 0.93
TNFRSF1B-202ENST00000489921 KRT19P08727 400 aa20.85■□□□□ 0.93
TNFRSF1B-202ENST00000489921 ASIC1P78348 528 aa20.85■□□□□ 0.93
TNFRSF1B-202ENST00000489921 TSPY1Q01534 308 aa20.85■□□□□ 0.93
TNFRSF1B-202ENST00000489921 TNK2Q07912 1038 aa20.85■□□□□ 0.93
TNFRSF1B-202ENST00000489921 NFE2Q16621 373 aaPredicted RBP20.85■□□□□ 0.93
TNFRSF1B-202ENST00000489921 DDR2Q16832 855 aa20.85■□□□□ 0.93
TNFRSF1B-202ENST00000489921 FOXD4L6Q3SYB3 417 aaPredicted RBP20.85■□□□□ 0.93
TNFRSF1B-202ENST00000489921 ARHGAP29Q52LW3 1261 aa20.85■□□□□ 0.93
TNFRSF1B-202ENST00000489921 FOXD4L3Q6VB84 417 aaPredicted RBP20.85■□□□□ 0.93
TNFRSF1B-202ENST00000489921 CMTM8Q8IZV2 173 aa20.85■□□□□ 0.93
TNFRSF1B-202ENST00000489921 TOP6BLQ8N6T0 577 aa20.85■□□□□ 0.93
TNFRSF1B-202ENST00000489921 TTC8Q8TAM2 541 aa20.85■□□□□ 0.93
TNFRSF1B-202ENST00000489921 RIN3Q8TB24 985 aa20.85■□□□□ 0.93
TNFRSF1B-202ENST00000489921 SCFD1Q8WVM8 642 aa20.85■□□□□ 0.93
TNFRSF1B-202ENST00000489921 KBTBD7Q8WVZ9 684 aa20.85■□□□□ 0.93
TNFRSF1B-202ENST00000489921 GZF1Q9H116 711 aaPredicted RBP20.85■□□□□ 0.93
TNFRSF1B-202ENST00000489921 C8orf33Q9H7E9 229 aaPredicted RBP20.85■□□□□ 0.93
TNFRSF1B-202ENST00000489921 PCDHA7Q9UN72 937 aa20.85■□□□□ 0.93
TNFRSF1B-202ENST00000489921 CCL26Q9Y258 94 aa20.85■□□□□ 0.93
TNFRSF1B-202ENST00000489921 SPECC1L-ADORA2AF8WAN1 911 aa20.84■□□□□ 0.93
TNFRSF1B-202ENST00000489921 POLR2DO15514 142 aaKnown RBP20.84■□□□□ 0.93
TNFRSF1B-202ENST00000489921 PRPF40AO75400 957 aaKnown RBP20.84■□□□□ 0.93
TNFRSF1B-202ENST00000489921 TADA3O75528 432 aa20.84■□□□□ 0.93
TNFRSF1B-202ENST00000489921 F13A1P00488 732 aa20.84■□□□□ 0.93
TNFRSF1B-202ENST00000489921 TMEM191BP0C7N4 346 aa20.84■□□□□ 0.93
TNFRSF1B-202ENST00000489921 CTHP32929 405 aa20.84■□□□□ 0.93
TNFRSF1B-202ENST00000489921 AMPD3Q01432 767 aa20.84■□□□□ 0.93
TNFRSF1B-202ENST00000489921 FAM26FQ5R3K3 315 aa20.84■□□□□ 0.93
TNFRSF1B-202ENST00000489921 FAM171BQ6P995 826 aa20.84■□□□□ 0.93
TNFRSF1B-202ENST00000489921 SPATA18Q8TC71 538 aa20.84■□□□□ 0.93
TNFRSF1B-202ENST00000489921 BPIFB1Q8TDL5 484 aa20.84■□□□□ 0.93
TNFRSF1B-202ENST00000489921 RUBCNQ92622 972 aa20.84■□□□□ 0.93
TNFRSF1B-202ENST00000489921 MSANTD3Q96H12 275 aa20.84■□□□□ 0.93
TNFRSF1B-202ENST00000489921 ABCB6Q9NP58 842 aa20.84■□□□□ 0.93
TNFRSF1B-202ENST00000489921 AGPAT3Q9NRZ7 376 aa20.84■□□□□ 0.93
TNFRSF1B-202ENST00000489921 RBM12Q9NTZ6 932 aaKnown RBP20.84■□□□□ 0.93
TNFRSF1B-202ENST00000489921 DPYSL4O14531 572 aa20.83■□□□□ 0.93
TNFRSF1B-202ENST00000489921 ATP2C2O75185 946 aa20.83■□□□□ 0.93
TNFRSF1B-202ENST00000489921 CST3P01034 146 aaPredicted RBP20.83■□□□□ 0.93
TNFRSF1B-202ENST00000489921 LMO2P25791 158 aa20.83■□□□□ 0.93
TNFRSF1B-202ENST00000489921 LHX1P48742 406 aa20.83■□□□□ 0.93
TNFRSF1B-202ENST00000489921 KPNA1P52294 538 aaPredicted RBP20.83■□□□□ 0.93
TNFRSF1B-202ENST00000489921 MYL7Q01449 175 aa20.83■□□□□ 0.93
TNFRSF1B-202ENST00000489921 RESP18Q5W5W9 173 aa20.83■□□□□ 0.93
TNFRSF1B-202ENST00000489921 TXNDC8Q6A555 127 aa20.83■□□□□ 0.93
TNFRSF1B-202ENST00000489921 STXBP4Q6ZWJ1 553 aa20.83■□□□□ 0.93
TNFRSF1B-202ENST00000489921 UNC13DQ70J99 1090 aa20.83■□□□□ 0.93
TNFRSF1B-202ENST00000489921 KIAA2013Q8IYS2 634 aa20.83■□□□□ 0.93
TNFRSF1B-202ENST00000489921 ADGRF2Q8IZF7 708 aa20.83■□□□□ 0.93
TNFRSF1B-202ENST00000489921 MAB21L3Q8N8X9 362 aa20.83■□□□□ 0.93
TNFRSF1B-202ENST00000489921 ATRIPQ8WXE1 791 aa20.83■□□□□ 0.93
TNFRSF1B-202ENST00000489921 USP13Q92995 863 aaPredicted RBP20.83■□□□□ 0.93
TNFRSF1B-202ENST00000489921 CHFRQ96EP1 664 aa20.83■□□□□ 0.93
TNFRSF1B-202ENST00000489921 HPDLQ96IR7 371 aa20.83■□□□□ 0.93
TNFRSF1B-202ENST00000489921 ANKRD36BP1Q96IX9 119 aa20.83■□□□□ 0.93
TNFRSF1B-202ENST00000489921 FAM83CQ9BQN1 747 aa20.83■□□□□ 0.93
TNFRSF1B-202ENST00000489921 IER2Q9BTL4 223 aa20.83■□□□□ 0.93
TNFRSF1B-202ENST00000489921 EPC1Q9H2F5 836 aa20.83■□□□□ 0.93
TNFRSF1B-202ENST00000489921 BLZF1Q9H2G9 400 aa20.83■□□□□ 0.93
TNFRSF1B-202ENST00000489921 CEP250Q9BV73 2442 aa20.83■□□□□ 0.92
TNFRSF1B-202ENST00000489921 OTOL1A6NHN0 477 aaPredicted RBP20.82■□□□□ 0.92
TNFRSF1B-202ENST00000489921 CLIC2O15247 247 aa20.82■□□□□ 0.92
TNFRSF1B-202ENST00000489921 NOL4O94818 638 aa20.82■□□□□ 0.92
TNFRSF1B-202ENST00000489921 CSH1P0DML2 217 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms