RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 ARHGAP15Q53QZ3 475 aa7.98□□□□□ -1.13
COL9A1-209ENST00000489861 ARHGAP40Q5TG30 622 aa7.98□□□□□ -1.13
COL9A1-209ENST00000489861 ERICH6BQ5W0A0 696 aa7.98□□□□□ -1.13
COL9A1-209ENST00000489861 LMBRD2Q68DH5 695 aaPredicted RBP7.98□□□□□ -1.13
COL9A1-209ENST00000489861 EXOC8Q8IYI6 725 aa7.98□□□□□ -1.13
COL9A1-209ENST00000489861 TTC9BQ8N6N2 239 aa7.98□□□□□ -1.13
COL9A1-209ENST00000489861 ASAP3Q8TDY4 903 aa7.98□□□□□ -1.13
COL9A1-209ENST00000489861 BAP1Q92560 729 aa7.98□□□□□ -1.13
COL9A1-209ENST00000489861 CEP170P1Q96L14 293 aa7.98□□□□□ -1.13
COL9A1-209ENST00000489861 PGLYRP2Q96PD5 576 aa7.98□□□□□ -1.13
COL9A1-209ENST00000489861 RNF26Q9BY78 433 aaPredicted RBP7.98□□□□□ -1.13
COL9A1-209ENST00000489861 MAFFQ9ULX9 164 aa7.98□□□□□ -1.13
COL9A1-209ENST00000489861 FNDC3AQ9Y2H6 1198 aaKnown RBP7.98□□□□□ -1.13
COL9A1-209ENST00000489861 SLC27A5Q9Y2P5 690 aa7.98□□□□□ -1.13
COL9A1-209ENST00000489861 PAXBP1Q9Y5B6 917 aa7.98□□□□□ -1.13
COL9A1-209ENST00000489861 AK5Q9Y6K8 562 aa7.98□□□□□ -1.13
COL9A1-209ENST00000489861 TP53BP1Q12888 1972 aaPredicted RBP7.98□□□□□ -1.13
COL9A1-209ENST00000489861 EML1O00423 815 aa7.97□□□□□ -1.13
COL9A1-209ENST00000489861 SYN3O14994 580 aa7.97□□□□□ -1.13
COL9A1-209ENST00000489861 ALDH1A2O94788 518 aa7.97□□□□□ -1.13
COL9A1-209ENST00000489861 OR4Q2P0C623 313 aa7.97□□□□□ -1.13
COL9A1-209ENST00000489861 CPB1P15086 417 aa7.97□□□□□ -1.13
COL9A1-209ENST00000489861 XBP1P17861 261 aa7.97□□□□□ -1.13
COL9A1-209ENST00000489861 MAOBP27338 520 aa7.97□□□□□ -1.13
COL9A1-209ENST00000489861 RFC5P40937 340 aa7.97□□□□□ -1.13
COL9A1-209ENST00000489861 OPRD1P41143 372 aa7.97□□□□□ -1.13
COL9A1-209ENST00000489861 POU5F1BQ06416 359 aa7.97□□□□□ -1.13
COL9A1-209ENST00000489861 MESP2Q0VG99 397 aa7.97□□□□□ -1.13
COL9A1-209ENST00000489861 RTP5Q14D33 572 aa7.97□□□□□ -1.13
COL9A1-209ENST00000489861 PFKFB3Q16875 520 aaPredicted RBP7.97□□□□□ -1.13
COL9A1-209ENST00000489861 HIST2H2BCQ6DN03 193 aa7.97□□□□□ -1.13
COL9A1-209ENST00000489861 NOSTRINQ8IVI9 506 aa7.97□□□□□ -1.13
COL9A1-209ENST00000489861 CMTM8Q8IZV2 173 aa7.97□□□□□ -1.13
COL9A1-209ENST00000489861 ALLCQ8N6M5 410 aa7.97□□□□□ -1.13
COL9A1-209ENST00000489861 TRIML1Q8N9V2 468 aa7.97□□□□□ -1.13
COL9A1-209ENST00000489861 IL17RCQ8NAC3 791 aa7.97□□□□□ -1.13
COL9A1-209ENST00000489861 TXNDC5Q8NBS9 432 aaKnown RBP7.97□□□□□ -1.13
COL9A1-209ENST00000489861 RHBDD1Q8TEB9 315 aa7.97□□□□□ -1.13
COL9A1-209ENST00000489861 TCP11Q8WWU5 503 aa7.97□□□□□ -1.13
COL9A1-209ENST00000489861 FGF11Q92914 225 aa7.97□□□□□ -1.13
COL9A1-209ENST00000489861 PSMG2Q969U7 264 aa7.97□□□□□ -1.13
COL9A1-209ENST00000489861 HSPA12BQ96MM6 686 aa7.97□□□□□ -1.13
COL9A1-209ENST00000489861 NAP1L4Q99733 375 aaKnown RBP7.97□□□□□ -1.13
COL9A1-209ENST00000489861 CDC6Q99741 560 aa7.97□□□□□ -1.13
COL9A1-209ENST00000489861 ZMYND12Q9H0C1 365 aa7.97□□□□□ -1.13
COL9A1-209ENST00000489861 ZDHHC4Q9NPG8 344 aa7.97□□□□□ -1.13
COL9A1-209ENST00000489861 SH3GLB2Q9NR46 395 aa7.97□□□□□ -1.13
COL9A1-209ENST00000489861 TM7SF3Q9NS93 570 aa7.97□□□□□ -1.13
COL9A1-209ENST00000489861 BCCIPQ9P287 314 aaKnown RBP eCLIP7.97□□□□□ -1.13
COL9A1-209ENST00000489861 USP20Q9Y2K6 914 aa7.97□□□□□ -1.13
COL9A1-209ENST00000489861 GDAQ9Y2T3 454 aa7.97□□□□□ -1.13
COL9A1-209ENST00000489861 V9GY48 417 aaPredicted RBP7.97□□□□□ -1.13
COL9A1-209ENST00000489861 F8P00451 2351 aa7.97□□□□□ -1.13
COL9A1-209ENST00000489861 NAV3Q8IVL0 2385 aa7.96□□□□□ -1.13
COL9A1-209ENST00000489861 IGHV1OR15-9A0A0B4J2B8 117 aa7.96□□□□□ -1.14
COL9A1-209ENST00000489861 CPLX1O14810 134 aa7.96□□□□□ -1.14
COL9A1-209ENST00000489861 PRPF3O43395 683 aaKnown RBP7.96□□□□□ -1.14
COL9A1-209ENST00000489861 ADAM23O75077 832 aa7.96□□□□□ -1.14
COL9A1-209ENST00000489861 CILPO75339 1184 aa7.96□□□□□ -1.14
COL9A1-209ENST00000489861 KLF8O95600 359 aaPredicted RBP7.96□□□□□ -1.14
COL9A1-209ENST00000489861 ZNF883P0CG24 379 aa7.96□□□□□ -1.14
COL9A1-209ENST00000489861 CR2P20023 1033 aa7.96□□□□□ -1.14
COL9A1-209ENST00000489861 RIPPLY3P57055 190 aa7.96□□□□□ -1.14
COL9A1-209ENST00000489861 BNC1Q01954 994 aa7.96□□□□□ -1.14
COL9A1-209ENST00000489861 CYP4A11Q02928 519 aa7.96□□□□□ -1.14
COL9A1-209ENST00000489861 BYSLQ13895 437 aaKnown RBP7.96□□□□□ -1.14
COL9A1-209ENST00000489861 UBAP2LQ14157 1087 aaKnown RBP7.96□□□□□ -1.14
COL9A1-209ENST00000489861 MXD4Q14582 209 aaPredicted RBP7.96□□□□□ -1.14
COL9A1-209ENST00000489861 PDGFRLQ15198 375 aa7.96□□□□□ -1.14
COL9A1-209ENST00000489861 GAB4Q2WGN9 574 aa7.96□□□□□ -1.14
COL9A1-209ENST00000489861 PREPLQ4J6C6 727 aaPredicted RBP7.96□□□□□ -1.14
COL9A1-209ENST00000489861 EMC10Q5UCC4 262 aa7.96□□□□□ -1.14
COL9A1-209ENST00000489861 GALNT17Q6IS24 598 aa7.96□□□□□ -1.14
COL9A1-209ENST00000489861 ZNF280DQ6N043 979 aa7.96□□□□□ -1.14
COL9A1-209ENST00000489861 ZNF574Q6ZN55 896 aaPredicted RBP7.96□□□□□ -1.14
COL9A1-209ENST00000489861 TMEM150AQ86TG1 271 aa7.96□□□□□ -1.14
COL9A1-209ENST00000489861 TMPRSS12Q86WS5 348 aa7.96□□□□□ -1.14
COL9A1-209ENST00000489861 ERICH1Q86X53 443 aa7.96□□□□□ -1.14
COL9A1-209ENST00000489861 PGBD3Q8N328 593 aa7.96□□□□□ -1.14
COL9A1-209ENST00000489861 FBXL16Q8N461 479 aa7.96□□□□□ -1.14
COL9A1-209ENST00000489861 CPA6Q8N4T0 437 aa7.96□□□□□ -1.14
COL9A1-209ENST00000489861 TMEM176AQ96HP8 235 aa7.96□□□□□ -1.14
COL9A1-209ENST00000489861 UROC1Q96N76 676 aa7.96□□□□□ -1.14
COL9A1-209ENST00000489861 LPIN3Q9BQK8 851 aa7.96□□□□□ -1.14
COL9A1-209ENST00000489861 PDZD7Q9H5P4 517 aa7.96□□□□□ -1.14
COL9A1-209ENST00000489861 GAREM1Q9H706 876 aa7.96□□□□□ -1.14
COL9A1-209ENST00000489861 TDP1Q9NUW8 608 aa7.96□□□□□ -1.14
COL9A1-209ENST00000489861 DAXXQ9UER7 740 aaPredicted RBP7.96□□□□□ -1.14
COL9A1-209ENST00000489861 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.96□□□□□ -1.14
COL9A1-209ENST00000489861 TCRBV21S2A2A0A5A6 115 aa7.95□□□□□ -1.14
COL9A1-209ENST00000489861 PODXLO00592 558 aa7.95□□□□□ -1.14
COL9A1-209ENST00000489861 TRIM66O15016 1216 aa7.95□□□□□ -1.14
COL9A1-209ENST00000489861 TNFSF14O43557 240 aa7.95□□□□□ -1.14
COL9A1-209ENST00000489861 BRINP1O60477 761 aa7.95□□□□□ -1.14
COL9A1-209ENST00000489861 CDKL5O76039 1030 aa7.95□□□□□ -1.14
COL9A1-209ENST00000489861 EDN1P05305 212 aa7.95□□□□□ -1.14
COL9A1-209ENST00000489861 MYF5P13349 255 aa7.95□□□□□ -1.14
COL9A1-209ENST00000489861 POU3F2P20265 443 aaPredicted RBP7.95□□□□□ -1.14
COL9A1-209ENST00000489861 GLRA2P23416 452 aa7.95□□□□□ -1.14
COL9A1-209ENST00000489861 TIE1P35590 1138 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms