RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 FAM237AA0A1B0GTK4 181 aa9.76□□□□□ -0.85
HDAC6-232ENST00000489053 A8MXQ7 604 aa9.76□□□□□ -0.85
HDAC6-232ENST00000489053 MAN2B1O00754 1011 aa9.76□□□□□ -0.85
HDAC6-232ENST00000489053 KLRC4O43908 158 aa9.76□□□□□ -0.85
HDAC6-232ENST00000489053 RHOBTB3O94955 611 aa9.76□□□□□ -0.85
HDAC6-232ENST00000489053 EPB41P11171 864 aaKnown RBP9.76□□□□□ -0.85
HDAC6-232ENST00000489053 PSMC3P17980 439 aa9.76□□□□□ -0.85
HDAC6-232ENST00000489053 NR2F2P24468 414 aa9.76□□□□□ -0.85
HDAC6-232ENST00000489053 GRIK1P39086 918 aa9.76□□□□□ -0.85
HDAC6-232ENST00000489053 ANP32AP39687 249 aaKnown RBP9.76□□□□□ -0.85
HDAC6-232ENST00000489053 PIK3CAP42336 1068 aa9.76□□□□□ -0.85
HDAC6-232ENST00000489053 EPHA5P54756 1037 aa9.76□□□□□ -0.85
HDAC6-232ENST00000489053 PSMC1P62191 440 aaKnown RBP9.76□□□□□ -0.85
HDAC6-232ENST00000489053 NHLH1Q02575 133 aa9.76□□□□□ -0.85
HDAC6-232ENST00000489053 FAM160A1Q05DH4 1040 aa9.76□□□□□ -0.85
HDAC6-232ENST00000489053 NCOA4Q13772 614 aa9.76□□□□□ -0.85
HDAC6-232ENST00000489053 KCNB1Q14721 858 aa9.76□□□□□ -0.85
HDAC6-232ENST00000489053 SLC44A4Q53GD3 710 aa9.76□□□□□ -0.85
HDAC6-232ENST00000489053 IER5LQ5T953 404 aa9.76□□□□□ -0.85
HDAC6-232ENST00000489053 PHLDB3Q6NSJ2 640 aa9.76□□□□□ -0.85
HDAC6-232ENST00000489053 CC2D1AQ6P1N0 951 aaPredicted RBP9.76□□□□□ -0.85
HDAC6-232ENST00000489053 ZNF852Q6ZMS4 543 aa9.76□□□□□ -0.85
HDAC6-232ENST00000489053 TPRG1Q6ZUI0 275 aa9.76□□□□□ -0.85
HDAC6-232ENST00000489053 INTS8Q75QN2 995 aaKnown RBP9.76□□□□□ -0.85
HDAC6-232ENST00000489053 TTC9BQ8N6N2 239 aa9.76□□□□□ -0.85
HDAC6-232ENST00000489053 TMEM105Q8N8V8 129 aa9.76□□□□□ -0.85
HDAC6-232ENST00000489053 SHKBP1Q8TBC3 707 aa9.76□□□□□ -0.85
HDAC6-232ENST00000489053 DNASE1L2Q92874 299 aa9.76□□□□□ -0.85
HDAC6-232ENST00000489053 SMARCE1Q969G3 411 aa9.76□□□□□ -0.85
HDAC6-232ENST00000489053 BORCS6Q96GS4 357 aa9.76□□□□□ -0.85
HDAC6-232ENST00000489053 FUBP3Q96I24 572 aaKnown RBP eCLIP9.76□□□□□ -0.85
HDAC6-232ENST00000489053 MED10Q9BTT4 135 aa9.76□□□□□ -0.85
HDAC6-232ENST00000489053 CRISPLD1Q9H336 500 aa9.76□□□□□ -0.85
HDAC6-232ENST00000489053 GOLPH3LQ9H4A5 285 aa9.76□□□□□ -0.85
HDAC6-232ENST00000489053 TRPC7Q9HCX4 862 aa9.76□□□□□ -0.85
HDAC6-232ENST00000489053 PTPRJQ12913 1337 aa9.76□□□□□ -0.85
HDAC6-232ENST00000489053 VWA8A3KMH1 1905 aa9.76□□□□□ -0.85
HDAC6-232ENST00000489053 MYH15Q9Y2K3 1946 aa9.76□□□□□ -0.85
HDAC6-232ENST00000489053 DENND4AQ7Z401 1863 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 KRBA1A5PL33 1030 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 LRRIQ3A6PVS8 624 aaPredicted RBP9.75□□□□□ -0.85
HDAC6-232ENST00000489053 HEPACAM2A8MVW5 462 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 H0Y858 1186 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 TRIM66O15016 1216 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 CETN3O15182 167 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 STX10O60499 249 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 VNN2O95498 520 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 PRR29P0C7W0 189 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 ATF6P18850 670 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 WARSP23381 471 aaKnown RBP9.75□□□□□ -0.85
HDAC6-232ENST00000489053 CYP2F1P24903 491 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 DDX6P26196 483 aaKnown RBP eCLIP9.75□□□□□ -0.85
HDAC6-232ENST00000489053 PSMC2P35998 433 aaKnown RBP9.75□□□□□ -0.85
HDAC6-232ENST00000489053 VIPR2P41587 438 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 CCR2P41597 374 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 CASP4P49662 377 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 PDE6CP51160 858 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 KPNA1P52294 538 aaPredicted RBP9.75□□□□□ -0.85
HDAC6-232ENST00000489053 MYL6P60660 151 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 CYP4F8P98187 520 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 DPYDQ12882 1025 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 ADAM9Q13443 819 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 DDR2Q16832 855 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 SOWAHAQ2M3V2 549 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 SGSM1Q2NKQ1 1148 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 MDH1BQ5I0G3 518 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 CWF19L1Q69YN2 538 aaKnown RBP9.75□□□□□ -0.85
HDAC6-232ENST00000489053 VSTM1Q6UX27 236 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 SCARA5Q6ZMJ2 495 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 LRRTM3Q86VH5 581 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 SLC9A9Q8IVB4 645 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 MFSD6LQ8IWD5 586 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 CCDC105Q8IYK2 499 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 FAM186BQ8IYM0 893 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 GUF1Q8N442 669 aaKnown RBP9.75□□□□□ -0.85
HDAC6-232ENST00000489053 DTWD2Q8NBA8 298 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 PRSS33Q8NF86 280 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 MYLPFQ96A32 169 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 TNIP3Q96KP6 325 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 ZSWIM3Q96MP5 696 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 NELL2Q99435 816 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 DNAJC25Q9H1X3 360 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 TASP1Q9H6P5 420 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 MMRN2Q9H8L6 949 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 C2orf16Q68DN1 1984 aa9.75□□□□□ -0.85
HDAC6-232ENST00000489053 CACNA1HO95180 2353 aa9.74□□□□□ -0.85
HDAC6-232ENST00000489053 KANSL1LA0AUZ9 987 aa9.74□□□□□ -0.85
HDAC6-232ENST00000489053 FAM170BA6NMN3 283 aa9.74□□□□□ -0.85
HDAC6-232ENST00000489053 SLC38A8A6NNN8 435 aa9.74□□□□□ -0.85
HDAC6-232ENST00000489053 IKBKBO14920 756 aa9.74□□□□□ -0.85
HDAC6-232ENST00000489053 TACC1O75410 805 aa9.74□□□□□ -0.85
HDAC6-232ENST00000489053 CKMP06732 381 aa9.74□□□□□ -0.85
HDAC6-232ENST00000489053 DCNP07585 359 aaKnown RBP9.74□□□□□ -0.85
HDAC6-232ENST00000489053 FAM163BP0C2L3 166 aa9.74□□□□□ -0.85
HDAC6-232ENST00000489053 BDNFP23560 247 aa9.74□□□□□ -0.85
HDAC6-232ENST00000489053 MAGEA11P43364 429 aa9.74□□□□□ -0.85
HDAC6-232ENST00000489053 VAMP7P51809 220 aa9.74□□□□□ -0.85
HDAC6-232ENST00000489053 PLCB2Q00722 1185 aa9.74□□□□□ -0.85
HDAC6-232ENST00000489053 PNOCQ13519 176 aa9.74□□□□□ -0.85
HDAC6-232ENST00000489053 PPP2R5DQ14738 602 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms