RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 IL21Q9HBE4 155 aa24.7■■□□□ 1.54
COL9A3-213ENST00000489045 F5P12259 2224 aa24.69■■□□□ 1.54
COL9A3-213ENST00000489045 A0A1B0GVL5 298 aa24.69■■□□□ 1.54
COL9A3-213ENST00000489045 PRR23AA6NEV1 266 aa24.69■■□□□ 1.54
COL9A3-213ENST00000489045 SHISA7A6NL88 538 aa24.69■■□□□ 1.54
COL9A3-213ENST00000489045 ZNF263O14978 683 aa24.69■■□□□ 1.54
COL9A3-213ENST00000489045 HCRTO43612 131 aa24.69■■□□□ 1.54
COL9A3-213ENST00000489045 KLRC4O43908 158 aa24.69■■□□□ 1.54
COL9A3-213ENST00000489045 PRPF40AO75400 957 aaKnown RBP24.69■■□□□ 1.54
COL9A3-213ENST00000489045 DLATP10515 647 aaKnown RBP24.69■■□□□ 1.54
COL9A3-213ENST00000489045 CDC25CP30307 473 aa24.69■■□□□ 1.54
COL9A3-213ENST00000489045 LHX1P48742 406 aa24.69■■□□□ 1.54
COL9A3-213ENST00000489045 CYP24A1Q07973 514 aa24.69■■□□□ 1.54
COL9A3-213ENST00000489045 PSMD6Q15008 389 aa24.69■■□□□ 1.54
COL9A3-213ENST00000489045 ARID3BQ8IVW6 561 aaPredicted RBP24.69■■□□□ 1.54
COL9A3-213ENST00000489045 PAGE5Q96GU1 130 aa24.69■■□□□ 1.54
COL9A3-213ENST00000489045 GCNAQ96QF7 691 aa24.69■■□□□ 1.54
COL9A3-213ENST00000489045 PKMYT1Q99640 499 aa24.69■■□□□ 1.54
COL9A3-213ENST00000489045 CGRRF1Q99675 332 aa24.69■■□□□ 1.54
COL9A3-213ENST00000489045 TRPV5Q9NQA5 729 aa24.69■■□□□ 1.54
COL9A3-213ENST00000489045 PTPRDP23468 1912 aa24.69■■□□□ 1.54
COL9A3-213ENST00000489045 KIF26AQ9ULI4 1882 aaPredicted RBP24.68■■□□□ 1.54
COL9A3-213ENST00000489045 GABRDO14764 452 aa24.68■■□□□ 1.54
COL9A3-213ENST00000489045 TNNI1P19237 187 aa24.68■■□□□ 1.54
COL9A3-213ENST00000489045 CMA1P23946 247 aa24.68■■□□□ 1.54
COL9A3-213ENST00000489045 GPR15P49685 360 aa24.68■■□□□ 1.54
COL9A3-213ENST00000489045 CCDC142Q17RM4 750 aa24.68■■□□□ 1.54
COL9A3-213ENST00000489045 KNOP1Q1ED39 458 aaKnown RBP24.68■■□□□ 1.54
COL9A3-213ENST00000489045 TRAPPC11Q7Z392 1133 aa24.68■■□□□ 1.54
COL9A3-213ENST00000489045 YAF2Q8IY57 180 aa24.68■■□□□ 1.54
COL9A3-213ENST00000489045 STKLD1Q8NE28 680 aa24.68■■□□□ 1.54
COL9A3-213ENST00000489045 NKD2Q969F2 451 aaPredicted RBP24.68■■□□□ 1.54
COL9A3-213ENST00000489045 CCDC127Q96BQ5 260 aa24.68■■□□□ 1.54
COL9A3-213ENST00000489045 FNBP1Q96RU3 617 aa24.68■■□□□ 1.54
COL9A3-213ENST00000489045 NELL2Q99435 816 aa24.68■■□□□ 1.54
COL9A3-213ENST00000489045 EXOC1Q9NV70 894 aa24.68■■□□□ 1.54
COL9A3-213ENST00000489045 CGNQ9P2M7 1197 aaKnown RBP24.68■■□□□ 1.54
COL9A3-213ENST00000489045 GTF3C4Q9UKN8 822 aa24.68■■□□□ 1.54
COL9A3-213ENST00000489045 MRPS17Q9Y2R5 130 aaKnown RBP24.68■■□□□ 1.54
COL9A3-213ENST00000489045 RIF1Q5UIP0 2472 aaKnown RBP24.67■■□□□ 1.54
COL9A3-213ENST00000489045 PCSK1P29120 753 aa24.67■■□□□ 1.54
COL9A3-213ENST00000489045 FCHO2Q0JRZ9 810 aa24.67■■□□□ 1.54
COL9A3-213ENST00000489045 SDHAF4Q5VUM1 108 aa24.67■■□□□ 1.54
COL9A3-213ENST00000489045 DPH6Q7L8W6 267 aa24.67■■□□□ 1.54
COL9A3-213ENST00000489045 LIMS2Q7Z4I7 341 aa24.67■■□□□ 1.54
COL9A3-213ENST00000489045 C12orf56Q8IXR9 622 aa24.67■■□□□ 1.54
COL9A3-213ENST00000489045 KBTBD7Q8WVZ9 684 aa24.67■■□□□ 1.54
COL9A3-213ENST00000489045 TASP1Q9H6P5 420 aa24.67■■□□□ 1.54
COL9A3-213ENST00000489045 ABCB6Q9NP58 842 aa24.67■■□□□ 1.54
COL9A3-213ENST00000489045 SPATA6Q9NWH7 488 aaPredicted RBP24.67■■□□□ 1.54
COL9A3-213ENST00000489045 HPSEQ9Y251 543 aa24.67■■□□□ 1.54
COL9A3-213ENST00000489045 PIAS3Q9Y6X2 628 aa24.67■■□□□ 1.54
COL9A3-213ENST00000489045 GREB1Q4ZG55 1949 aa24.67■■□□□ 1.54
COL9A3-213ENST00000489045 ARNTLO00327 626 aa24.66■■□□□ 1.54
COL9A3-213ENST00000489045 MAN2B1O00754 1011 aa24.66■■□□□ 1.54
COL9A3-213ENST00000489045 DPYSL4O14531 572 aa24.66■■□□□ 1.54
COL9A3-213ENST00000489045 PRAMEF12O95522 483 aa24.66■■□□□ 1.54
COL9A3-213ENST00000489045 HMGA1P17096 107 aaKnown RBP24.66■■□□□ 1.54
COL9A3-213ENST00000489045 CYP2F1P24903 491 aa24.66■■□□□ 1.54
COL9A3-213ENST00000489045 MAGEA9P43362 315 aa24.66■■□□□ 1.54
COL9A3-213ENST00000489045 KIAA0895Q8NCT3 520 aa24.66■■□□□ 1.54
COL9A3-213ENST00000489045 CLDN23Q96B33 292 aa24.66■■□□□ 1.54
COL9A3-213ENST00000489045 USP25Q9UHP3 1055 aa24.66■■□□□ 1.54
COL9A3-213ENST00000489045 NDRG2Q9UN36 371 aaKnown RBP24.66■■□□□ 1.54
COL9A3-213ENST00000489045 FAM186AA6NE01 2351 aa24.65■■□□□ 1.54
COL9A3-213ENST00000489045 CHADO15335 359 aa24.65■■□□□ 1.54
COL9A3-213ENST00000489045 NCAM2O15394 837 aa24.65■■□□□ 1.54
COL9A3-213ENST00000489045 EXOC3O60645 756 aa24.65■■□□□ 1.54
COL9A3-213ENST00000489045 SP9P0CG40 484 aa24.65■■□□□ 1.54
COL9A3-213ENST00000489045 CSH1P0DML2 217 aa24.65■■□□□ 1.54
COL9A3-213ENST00000489045 CSH2P0DML3 217 aa24.65■■□□□ 1.54
COL9A3-213ENST00000489045 WEE1P30291 646 aa24.65■■□□□ 1.54
COL9A3-213ENST00000489045 RPL10AP62906 217 aaKnown RBP24.65■■□□□ 1.54
COL9A3-213ENST00000489045 STK4Q13043 487 aa24.65■■□□□ 1.54
COL9A3-213ENST00000489045 DDR2Q16832 855 aa24.65■■□□□ 1.54
COL9A3-213ENST00000489045 KMT5BQ4FZB7 885 aa24.65■■□□□ 1.54
COL9A3-213ENST00000489045 TMEM150AQ86TG1 271 aa24.65■■□□□ 1.54
COL9A3-213ENST00000489045 SPATA2LQ8IUW3 424 aaPredicted RBP24.65■■□□□ 1.54
COL9A3-213ENST00000489045 MAML2Q8IZL2 1156 aaPredicted RBP24.65■■□□□ 1.54
COL9A3-213ENST00000489045 CSGALNACT1Q8TDX6 532 aa24.65■■□□□ 1.54
COL9A3-213ENST00000489045 LRRC3BQ96PB8 259 aa24.65■■□□□ 1.54
COL9A3-213ENST00000489045 MMS19Q96T76 1030 aa24.65■■□□□ 1.54
COL9A3-213ENST00000489045 SYT15Q9BQS2 421 aa24.65■■□□□ 1.54
COL9A3-213ENST00000489045 GZF1Q9H116 711 aaPredicted RBP24.65■■□□□ 1.54
COL9A3-213ENST00000489045 OBP2AQ9NY56 170 aa24.65■■□□□ 1.54
COL9A3-213ENST00000489045 MAGED2Q9UNF1 606 aaPredicted RBP24.65■■□□□ 1.54
COL9A3-213ENST00000489045 R4GN57 208 aa24.65■■□□□ 1.54
COL9A3-213ENST00000489045 MYBPHLA2RUH7 354 aa24.64■■□□□ 1.54
COL9A3-213ENST00000489045 CST3P01034 146 aaPredicted RBP24.64■■□□□ 1.54
COL9A3-213ENST00000489045 F11P03951 625 aa24.64■■□□□ 1.54
COL9A3-213ENST00000489045 RPS9P46781 194 aaKnown RBP24.64■■□□□ 1.54
COL9A3-213ENST00000489045 NLRP12P59046 1061 aa24.64■■□□□ 1.54
COL9A3-213ENST00000489045 PSMC1P62191 440 aaKnown RBP24.64■■□□□ 1.54
COL9A3-213ENST00000489045 FZD5Q13467 585 aa24.64■■□□□ 1.54
COL9A3-213ENST00000489045 CFAP221Q4G0U5 840 aa24.64■■□□□ 1.54
COL9A3-213ENST00000489045 GOLGA5Q8TBA6 731 aa24.64■■□□□ 1.54
COL9A3-213ENST00000489045 SLC46A2Q9BY10 475 aa24.64■■□□□ 1.54
COL9A3-213ENST00000489045 ANAPC1Q9H1A4 1944 aa24.64■■□□□ 1.53
COL9A3-213ENST00000489045 LAMTOR5O43504 91 aa24.63■■□□□ 1.53
COL9A3-213ENST00000489045 ATP2C2O75185 946 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms