RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 FRMD4BQ9Y2L6 1034 aa18.73■□□□□ 0.59
ATG3-205ENST00000488910 PI15O43692 258 aa18.72■□□□□ 0.59
ATG3-205ENST00000488910 PHACTR2O75167 634 aa18.72■□□□□ 0.59
ATG3-205ENST00000488910 TACC1O75410 805 aa18.72■□□□□ 0.59
ATG3-205ENST00000488910 ACAT1P24752 427 aaKnown RBP18.72■□□□□ 0.59
ATG3-205ENST00000488910 GABRR2P28476 465 aa18.72■□□□□ 0.59
ATG3-205ENST00000488910 CDC25CP30307 473 aa18.72■□□□□ 0.59
ATG3-205ENST00000488910 RPL10AP62906 217 aaKnown RBP18.72■□□□□ 0.59
ATG3-205ENST00000488910 MAPRE1Q15691 268 aaKnown RBP18.72■□□□□ 0.59
ATG3-205ENST00000488910 WDR72Q3MJ13 1102 aa18.72■□□□□ 0.59
ATG3-205ENST00000488910 ARHGAP15Q53QZ3 475 aa18.72■□□□□ 0.59
ATG3-205ENST00000488910 PLEKHO2Q8TD55 490 aa18.72■□□□□ 0.59
ATG3-205ENST00000488910 TMC2Q8TDI7 906 aa18.72■□□□□ 0.59
ATG3-205ENST00000488910 DEPDC1BQ8WUY9 529 aa18.72■□□□□ 0.59
ATG3-205ENST00000488910 KBTBD7Q8WVZ9 684 aa18.72■□□□□ 0.59
ATG3-205ENST00000488910 SYAP1Q96A49 352 aaPredicted RBP18.72■□□□□ 0.59
ATG3-205ENST00000488910 PI4K2AQ9BTU6 479 aa18.72■□□□□ 0.59
ATG3-205ENST00000488910 TRMT61BQ9BVS5 477 aaKnown RBP18.72■□□□□ 0.59
ATG3-205ENST00000488910 ATXN3LQ9H3M9 355 aa18.72■□□□□ 0.59
ATG3-205ENST00000488910 ZNF334Q9HCZ1 680 aaPredicted RBP18.72■□□□□ 0.59
ATG3-205ENST00000488910 ZMYM5Q9UJ78 669 aa18.72■□□□□ 0.59
ATG3-205ENST00000488910 MAPK13O15264 365 aa18.71■□□□□ 0.59
ATG3-205ENST00000488910 PSMC3P17980 439 aa18.71■□□□□ 0.59
ATG3-205ENST00000488910 RPL13P26373 211 aaKnown RBP18.71■□□□□ 0.59
ATG3-205ENST00000488910 WEE1P30291 646 aa18.71■□□□□ 0.59
ATG3-205ENST00000488910 GNL1P36915 607 aaPredicted RBP18.71■□□□□ 0.59
ATG3-205ENST00000488910 CASP4P49662 377 aa18.71■□□□□ 0.59
ATG3-205ENST00000488910 CDR1P51861 262 aa18.71■□□□□ 0.59
ATG3-205ENST00000488910 TNNC1P63316 161 aa18.71■□□□□ 0.59
ATG3-205ENST00000488910 MLF2Q15773 248 aaPredicted RBP18.71■□□□□ 0.59
ATG3-205ENST00000488910 CFAP221Q4G0U5 840 aa18.71■□□□□ 0.59
ATG3-205ENST00000488910 C4orf50Q6ZRC1 276 aa18.71■□□□□ 0.59
ATG3-205ENST00000488910 SPATA2LQ8IUW3 424 aaPredicted RBP18.71■□□□□ 0.59
ATG3-205ENST00000488910 ENGASEQ8NFI3 743 aa18.71■□□□□ 0.59
ATG3-205ENST00000488910 GIPC2Q8TF65 315 aa18.71■□□□□ 0.59
ATG3-205ENST00000488910 GCNAQ96QF7 691 aa18.71■□□□□ 0.59
ATG3-205ENST00000488910 SNX25Q9H3E2 840 aa18.71■□□□□ 0.59
ATG3-205ENST00000488910 VRTNQ9H8Y1 702 aa18.71■□□□□ 0.59
ATG3-205ENST00000488910 MYBPHLA2RUH7 354 aa18.7■□□□□ 0.58
ATG3-205ENST00000488910 LRRIQ3A6PVS8 624 aaPredicted RBP18.7■□□□□ 0.58
ATG3-205ENST00000488910 IKBKBO14920 756 aa18.7■□□□□ 0.58
ATG3-205ENST00000488910 C4BPAP04003 597 aaKnown RBP18.7■□□□□ 0.58
ATG3-205ENST00000488910 CSH1P0DML2 217 aa18.7■□□□□ 0.58
ATG3-205ENST00000488910 CSH2P0DML3 217 aa18.7■□□□□ 0.58
ATG3-205ENST00000488910 CYP2F1P24903 491 aa18.7■□□□□ 0.58
ATG3-205ENST00000488910 LMO2P25791 158 aa18.7■□□□□ 0.58
ATG3-205ENST00000488910 MYL6P60660 151 aa18.7■□□□□ 0.58
ATG3-205ENST00000488910 FAM160A1Q05DH4 1040 aa18.7■□□□□ 0.58
ATG3-205ENST00000488910 BIRC3Q13489 604 aa18.7■□□□□ 0.58
ATG3-205ENST00000488910 SNW1Q13573 536 aaKnown RBP18.7■□□□□ 0.58
ATG3-205ENST00000488910 TDRD10Q5VZ19 366 aaKnown RBP18.7■□□□□ 0.58
ATG3-205ENST00000488910 CEP135Q66GS9 1140 aa18.7■□□□□ 0.58
ATG3-205ENST00000488910 MFSD6LQ8IWD5 586 aa18.7■□□□□ 0.58
ATG3-205ENST00000488910 DNASE1L2Q92874 299 aa18.7■□□□□ 0.58
ATG3-205ENST00000488910 IRF7Q92985 503 aa18.7■□□□□ 0.58
ATG3-205ENST00000488910 SYT15Q9BQS2 421 aa18.7■□□□□ 0.58
ATG3-205ENST00000488910 DDX23Q9BUQ8 820 aaKnown RBP18.7■□□□□ 0.58
ATG3-205ENST00000488910 XYLT2Q9H1B5 865 aa18.7■□□□□ 0.58
ATG3-205ENST00000488910 IL21Q9HBE4 155 aa18.7■□□□□ 0.58
ATG3-205ENST00000488910 TRPV5Q9NQA5 729 aa18.7■□□□□ 0.58
ATG3-205ENST00000488910 RMND1Q9NWS8 449 aa18.7■□□□□ 0.58
ATG3-205ENST00000488910 HOOK1Q9UJC3 728 aaKnown RBP18.7■□□□□ 0.58
ATG3-205ENST00000488910 SIT1Q9Y3P8 196 aa18.7■□□□□ 0.58
ATG3-205ENST00000488910 SOBPA7XYQ1 873 aa18.69■□□□□ 0.58
ATG3-205ENST00000488910 PDGFRBP09619 1106 aa18.69■□□□□ 0.58
ATG3-205ENST00000488910 HMGA1P17096 107 aaKnown RBP18.69■□□□□ 0.58
ATG3-205ENST00000488910 VIPR2P41587 438 aa18.69■□□□□ 0.58
ATG3-205ENST00000488910 MAGEA11P43364 429 aa18.69■□□□□ 0.58
ATG3-205ENST00000488910 ENPEPQ07075 957 aa18.69■□□□□ 0.58
ATG3-205ENST00000488910 NCOA4Q13772 614 aa18.69■□□□□ 0.58
ATG3-205ENST00000488910 GPR158Q5T848 1215 aa18.69■□□□□ 0.58
ATG3-205ENST00000488910 VITQ6UXI7 678 aa18.69■□□□□ 0.58
ATG3-205ENST00000488910 ARID3BQ8IVW6 561 aaPredicted RBP18.69■□□□□ 0.58
ATG3-205ENST00000488910 CCDC105Q8IYK2 499 aa18.69■□□□□ 0.58
ATG3-205ENST00000488910 CEP295NLQ96MC4 621 aa18.69■□□□□ 0.58
ATG3-205ENST00000488910 TIGD1Q96MW7 591 aa18.69■□□□□ 0.58
ATG3-205ENST00000488910 GSDMAQ96QA5 445 aa18.69■□□□□ 0.58
ATG3-205ENST00000488910 MKNK1Q9BUB5 465 aa18.69■□□□□ 0.58
ATG3-205ENST00000488910 GTPBP4Q9BZE4 634 aaKnown RBP18.69■□□□□ 0.58
ATG3-205ENST00000488910 TASP1Q9H6P5 420 aa18.69■□□□□ 0.58
ATG3-205ENST00000488910 BRD9Q9H8M2 597 aa18.69■□□□□ 0.58
ATG3-205ENST00000488910 OBP2AQ9NY56 170 aa18.69■□□□□ 0.58
ATG3-205ENST00000488910 MAGEC2Q9UBF1 373 aaPredicted RBP18.69■□□□□ 0.58
ATG3-205ENST00000488910 MAPK8IP1Q9UQF2 711 aa18.69■□□□□ 0.58
ATG3-205ENST00000488910 KANSL1LA0AUZ9 987 aa18.68■□□□□ 0.58
ATG3-205ENST00000488910 HEPACAM2A8MVW5 462 aa18.68■□□□□ 0.58
ATG3-205ENST00000488910 HCRTO43612 131 aa18.68■□□□□ 0.58
ATG3-205ENST00000488910 ATP2C2O75185 946 aa18.68■□□□□ 0.58
ATG3-205ENST00000488910 SMC2O95347 1197 aa18.68■□□□□ 0.58
ATG3-205ENST00000488910 NR2F2P24468 414 aa18.68■□□□□ 0.58
ATG3-205ENST00000488910 DDX6P26196 483 aaKnown RBP eCLIP18.68■□□□□ 0.58
ATG3-205ENST00000488910 PNOCQ13519 176 aa18.68■□□□□ 0.58
ATG3-205ENST00000488910 GRM2Q14416 872 aa18.68■□□□□ 0.58
ATG3-205ENST00000488910 DDR2Q16832 855 aa18.68■□□□□ 0.58
ATG3-205ENST00000488910 SGSM1Q2NKQ1 1148 aa18.68■□□□□ 0.58
ATG3-205ENST00000488910 ZACNQ401N2 412 aa18.68■□□□□ 0.58
ATG3-205ENST00000488910 VSTM1Q6UX27 236 aa18.68■□□□□ 0.58
ATG3-205ENST00000488910 ELOA2Q8IYF1 753 aaPredicted RBP18.68■□□□□ 0.58
ATG3-205ENST00000488910 DTWD2Q8NBA8 298 aa18.68■□□□□ 0.58
ATG3-205ENST00000488910 OR6B3Q8NGW1 331 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms