RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 TNNC1P63316 161 aa19.01■□□□□ 0.63
ITGB1-215ENST00000488494 CYP4F8P98187 520 aa19.01■□□□□ 0.63
ITGB1-215ENST00000488494 TRPC3Q13507 836 aa19.01■□□□□ 0.63
ITGB1-215ENST00000488494 TDRD10Q5VZ19 366 aaKnown RBP19.01■□□□□ 0.63
ITGB1-215ENST00000488494 PHLDB3Q6NSJ2 640 aa19.01■□□□□ 0.63
ITGB1-215ENST00000488494 VITQ6UXI7 678 aa19.01■□□□□ 0.63
ITGB1-215ENST00000488494 DPH6Q7L8W6 267 aa19.01■□□□□ 0.63
ITGB1-215ENST00000488494 CCDC105Q8IYK2 499 aa19.01■□□□□ 0.63
ITGB1-215ENST00000488494 GPR88Q9GZN0 384 aa19.01■□□□□ 0.63
ITGB1-215ENST00000488494 TRPV4Q9HBA0 871 aa19.01■□□□□ 0.63
ITGB1-215ENST00000488494 FAM86C1Q9NVL1 165 aa19.01■□□□□ 0.63
ITGB1-215ENST00000488494 GOLGA6L4A6NEF3 574 aa19■□□□□ 0.63
ITGB1-215ENST00000488494 CALUO43852 315 aaPredicted RBP19■□□□□ 0.63
ITGB1-215ENST00000488494 ATP2C2O75185 946 aa19■□□□□ 0.63
ITGB1-215ENST00000488494 KIF20AO95235 890 aa19■□□□□ 0.63
ITGB1-215ENST00000488494 CST3P01034 146 aaPredicted RBP19■□□□□ 0.63
ITGB1-215ENST00000488494 WARSP23381 471 aaKnown RBP19■□□□□ 0.63
ITGB1-215ENST00000488494 CYP2F1P24903 491 aa19■□□□□ 0.63
ITGB1-215ENST00000488494 CDC25CP30307 473 aa19■□□□□ 0.63
ITGB1-215ENST00000488494 MYL6P60660 151 aa19■□□□□ 0.63
ITGB1-215ENST00000488494 KCNB1Q14721 858 aa19■□□□□ 0.63
ITGB1-215ENST00000488494 ARHGAP15Q53QZ3 475 aa19■□□□□ 0.63
ITGB1-215ENST00000488494 GPR158Q5T848 1215 aa19■□□□□ 0.63
ITGB1-215ENST00000488494 SDHAF4Q5VUM1 108 aa19■□□□□ 0.63
ITGB1-215ENST00000488494 CEP135Q66GS9 1140 aa19■□□□□ 0.63
ITGB1-215ENST00000488494 SPATA2LQ8IUW3 424 aaPredicted RBP19■□□□□ 0.63
ITGB1-215ENST00000488494 FMR1NBQ8N0W7 255 aaPredicted RBP19■□□□□ 0.63
ITGB1-215ENST00000488494 PARD3BQ8TEW8 1205 aa19■□□□□ 0.63
ITGB1-215ENST00000488494 TMEM174Q8WUU8 243 aa19■□□□□ 0.63
ITGB1-215ENST00000488494 MYLPFQ96A32 169 aa19■□□□□ 0.63
ITGB1-215ENST00000488494 RSPRY1Q96DX4 576 aa19■□□□□ 0.63
ITGB1-215ENST00000488494 CCDC34Q96HJ3 373 aa19■□□□□ 0.63
ITGB1-215ENST00000488494 SHDQ96IW2 340 aa19■□□□□ 0.63
ITGB1-215ENST00000488494 MRPL45Q9BRJ2 306 aaKnown RBP19■□□□□ 0.63
ITGB1-215ENST00000488494 MKNK1Q9BUB5 465 aa19■□□□□ 0.63
ITGB1-215ENST00000488494 IL21Q9HBE4 155 aa19■□□□□ 0.63
ITGB1-215ENST00000488494 NUP210Q8TEM1 1887 aaPredicted RBP18.99■□□□□ 0.63
ITGB1-215ENST00000488494 MYBPHLA2RUH7 354 aa18.99■□□□□ 0.63
ITGB1-215ENST00000488494 H0Y858 1186 aa18.99■□□□□ 0.63
ITGB1-215ENST00000488494 LMO2P25791 158 aa18.99■□□□□ 0.63
ITGB1-215ENST00000488494 STARD6P59095 220 aa18.99■□□□□ 0.63
ITGB1-215ENST00000488494 DLG4P78352 724 aa18.99■□□□□ 0.63
ITGB1-215ENST00000488494 PRKCQQ04759 706 aa18.99■□□□□ 0.63
ITGB1-215ENST00000488494 PNOCQ13519 176 aa18.99■□□□□ 0.63
ITGB1-215ENST00000488494 WDR72Q3MJ13 1102 aa18.99■□□□□ 0.63
ITGB1-215ENST00000488494 CFAP221Q4G0U5 840 aa18.99■□□□□ 0.63
ITGB1-215ENST00000488494 SLC44A4Q53GD3 710 aa18.99■□□□□ 0.63
ITGB1-215ENST00000488494 TPRG1Q6ZUI0 275 aa18.99■□□□□ 0.63
ITGB1-215ENST00000488494 PJA1Q8NG27 643 aa18.99■□□□□ 0.63
ITGB1-215ENST00000488494 DEPDC1BQ8WUY9 529 aa18.99■□□□□ 0.63
ITGB1-215ENST00000488494 DNASE1L2Q92874 299 aa18.99■□□□□ 0.63
ITGB1-215ENST00000488494 SYAP1Q96A49 352 aaPredicted RBP18.99■□□□□ 0.63
ITGB1-215ENST00000488494 PHOX2BQ99453 314 aa18.99■□□□□ 0.63
ITGB1-215ENST00000488494 TRMT61BQ9BVS5 477 aaKnown RBP18.99■□□□□ 0.63
ITGB1-215ENST00000488494 XYLT2Q9H1B5 865 aa18.99■□□□□ 0.63
ITGB1-215ENST00000488494 SNX25Q9H3E2 840 aa18.99■□□□□ 0.63
ITGB1-215ENST00000488494 BRD9Q9H8M2 597 aa18.99■□□□□ 0.63
ITGB1-215ENST00000488494 CRTAC1Q9NQ79 661 aa18.99■□□□□ 0.63
ITGB1-215ENST00000488494 NXF1Q9UBU9 619 aaKnown RBP18.99■□□□□ 0.63
ITGB1-215ENST00000488494 CDH9Q9ULB4 789 aa18.99■□□□□ 0.63
ITGB1-215ENST00000488494 TRAF3IP3Q9Y228 551 aa18.99■□□□□ 0.63
ITGB1-215ENST00000488494 FRMD4BQ9Y2L6 1034 aa18.99■□□□□ 0.63
ITGB1-215ENST00000488494 HEPACAM2A8MVW5 462 aa18.98■□□□□ 0.63
ITGB1-215ENST00000488494 PRAMEF12O95522 483 aa18.98■□□□□ 0.63
ITGB1-215ENST00000488494 STAU1O95793 577 aaKnown RBP18.98■□□□□ 0.63
ITGB1-215ENST00000488494 DCNP07585 359 aaKnown RBP18.98■□□□□ 0.63
ITGB1-215ENST00000488494 PDGFRBP09619 1106 aa18.98■□□□□ 0.63
ITGB1-215ENST00000488494 HMGA1P17096 107 aaKnown RBP18.98■□□□□ 0.63
ITGB1-215ENST00000488494 PSMC3P17980 439 aa18.98■□□□□ 0.63
ITGB1-215ENST00000488494 NR2F2P24468 414 aa18.98■□□□□ 0.63
ITGB1-215ENST00000488494 GDI1P31150 447 aa18.98■□□□□ 0.63
ITGB1-215ENST00000488494 HOXD11P31277 338 aaPredicted RBP18.98■□□□□ 0.63
ITGB1-215ENST00000488494 ATICP31939 592 aa18.98■□□□□ 0.63
ITGB1-215ENST00000488494 AP3M2P53677 418 aa18.98■□□□□ 0.63
ITGB1-215ENST00000488494 RPL10AP62906 217 aaKnown RBP18.98■□□□□ 0.63
ITGB1-215ENST00000488494 CLDN10P78369 228 aa18.98■□□□□ 0.63
ITGB1-215ENST00000488494 FAM160A1Q05DH4 1040 aa18.98■□□□□ 0.63
ITGB1-215ENST00000488494 NCOA4Q13772 614 aa18.98■□□□□ 0.63
ITGB1-215ENST00000488494 DDR2Q16832 855 aa18.98■□□□□ 0.63
ITGB1-215ENST00000488494 ZNF699Q32M78 642 aa18.98■□□□□ 0.63
ITGB1-215ENST00000488494 SCARA5Q6ZMJ2 495 aa18.98■□□□□ 0.63
ITGB1-215ENST00000488494 GPIHBP1Q8IV16 184 aa18.98■□□□□ 0.63
ITGB1-215ENST00000488494 SMYD4Q8IYR2 804 aaPredicted RBP18.98■□□□□ 0.63
ITGB1-215ENST00000488494 GUF1Q8N442 669 aaKnown RBP18.98■□□□□ 0.63
ITGB1-215ENST00000488494 DTWD2Q8NBA8 298 aa18.98■□□□□ 0.63
ITGB1-215ENST00000488494 FUBP3Q96I24 572 aaKnown RBP eCLIP18.98■□□□□ 0.63
ITGB1-215ENST00000488494 SMYD3Q9H7B4 428 aa18.98■□□□□ 0.63
ITGB1-215ENST00000488494 HEBP1Q9NRV9 189 aa18.98■□□□□ 0.63
ITGB1-215ENST00000488494 MAGED2Q9UNF1 606 aaPredicted RBP18.98■□□□□ 0.63
ITGB1-215ENST00000488494 SIT1Q9Y3P8 196 aa18.98■□□□□ 0.63
ITGB1-215ENST00000488494 NME7Q9Y5B8 376 aa18.98■□□□□ 0.63
ITGB1-215ENST00000488494 PIEZO1Q92508 2521 aa18.98■□□□□ 0.63
ITGB1-215ENST00000488494 CACNA1HO95180 2353 aa18.97■□□□□ 0.63
ITGB1-215ENST00000488494 TACC1O75410 805 aa18.97■□□□□ 0.63
ITGB1-215ENST00000488494 CSH1P0DML2 217 aa18.97■□□□□ 0.63
ITGB1-215ENST00000488494 CSH2P0DML3 217 aa18.97■□□□□ 0.63
ITGB1-215ENST00000488494 NLRP12P59046 1061 aa18.97■□□□□ 0.63
ITGB1-215ENST00000488494 CYP27A1Q02318 531 aa18.97■□□□□ 0.63
ITGB1-215ENST00000488494 UBXN2BQ14CS0 331 aa18.97■□□□□ 0.63
ITGB1-215ENST00000488494 MDH1BQ5I0G3 518 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms