RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 ADSSL1Q8N142 457 aa20.76■□□□□ 0.91
CD55-209ENST00000488171 SPATA18Q8TC71 538 aa20.76■□□□□ 0.91
CD55-209ENST00000488171 SEMA4AQ9H3S1 761 aa20.76■□□□□ 0.91
CD55-209ENST00000488171 TASP1Q9H6P5 420 aa20.76■□□□□ 0.91
CD55-209ENST00000488171 FBXO4Q9UKT5 387 aa20.76■□□□□ 0.91
CD55-209ENST00000488171 CFAP45Q9UL16 551 aa20.76■□□□□ 0.91
CD55-209ENST00000488171 NDRG2Q9UN36 371 aaKnown RBP20.76■□□□□ 0.91
CD55-209ENST00000488171 CACNA1IQ9P0X4 2223 aa20.76■□□□□ 0.91
CD55-209ENST00000488171 CHADO15335 359 aa20.75■□□□□ 0.91
CD55-209ENST00000488171 LAMTOR5O43504 91 aa20.75■□□□□ 0.91
CD55-209ENST00000488171 PRAMEF12O95522 483 aa20.75■□□□□ 0.91
CD55-209ENST00000488171 TNNC2P02585 160 aa20.75■□□□□ 0.91
CD55-209ENST00000488171 AFMP43652 599 aa20.75■□□□□ 0.91
CD55-209ENST00000488171 MYL7Q01449 175 aa20.75■□□□□ 0.91
CD55-209ENST00000488171 SNRNP35Q16560 246 aaKnown RBP20.75■□□□□ 0.91
CD55-209ENST00000488171 DUOXA2Q1HG44 320 aa20.75■□□□□ 0.91
CD55-209ENST00000488171 WDR49Q8IV35 697 aa20.75■□□□□ 0.91
CD55-209ENST00000488171 YAF2Q8IY57 180 aa20.75■□□□□ 0.91
CD55-209ENST00000488171 ADGRF2Q8IZF7 708 aa20.75■□□□□ 0.91
CD55-209ENST00000488171 STKLD1Q8NE28 680 aa20.75■□□□□ 0.91
CD55-209ENST00000488171 FAM3CQ92520 227 aa20.75■□□□□ 0.91
CD55-209ENST00000488171 HPDLQ96IR7 371 aa20.75■□□□□ 0.91
CD55-209ENST00000488171 OBP2AQ9NY56 170 aa20.75■□□□□ 0.91
CD55-209ENST00000488171 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.74■□□□□ 0.91
CD55-209ENST00000488171 PVALEFA0A1B0GWK0 134 aa20.74■□□□□ 0.91
CD55-209ENST00000488171 CLIC2O15247 247 aa20.74■□□□□ 0.91
CD55-209ENST00000488171 PRPF40AO75400 957 aaKnown RBP20.74■□□□□ 0.91
CD55-209ENST00000488171 LHX1P48742 406 aa20.74■□□□□ 0.91
CD55-209ENST00000488171 MLLT6P55198 1093 aaPredicted RBP20.74■□□□□ 0.91
CD55-209ENST00000488171 NLRP12P59046 1061 aa20.74■□□□□ 0.91
CD55-209ENST00000488171 MYO1EQ12965 1108 aa20.74■□□□□ 0.91
CD55-209ENST00000488171 TAF12Q16514 161 aa20.74■□□□□ 0.91
CD55-209ENST00000488171 BMT2Q1RMZ1 405 aa20.74■□□□□ 0.91
CD55-209ENST00000488171 ZNF528Q3MIS6 628 aa20.74■□□□□ 0.91
CD55-209ENST00000488171 ZC3H14Q6PJT7 736 aaKnown RBP20.74■□□□□ 0.91
CD55-209ENST00000488171 GRAMD1CQ8IYS0 662 aa20.74■□□□□ 0.91
CD55-209ENST00000488171 RDH13Q8NBN7 331 aa20.74■□□□□ 0.91
CD55-209ENST00000488171 SLC46A2Q9BY10 475 aa20.74■□□□□ 0.91
CD55-209ENST00000488171 ABCB6Q9NP58 842 aa20.74■□□□□ 0.91
CD55-209ENST00000488171 SLC39A2Q9NP94 309 aa20.74■□□□□ 0.91
CD55-209ENST00000488171 GTF3C4Q9UKN8 822 aa20.74■□□□□ 0.91
CD55-209ENST00000488171 DENND4CQ5VZ89 1909 aa20.74■□□□□ 0.91
CD55-209ENST00000488171 DPYSL4O14531 572 aa20.73■□□□□ 0.91
CD55-209ENST00000488171 LMNAP02545 664 aaKnown RBP20.73■□□□□ 0.91
CD55-209ENST00000488171 F11P03951 625 aa20.73■□□□□ 0.91
CD55-209ENST00000488171 CYP2F1P24903 491 aa20.73■□□□□ 0.91
CD55-209ENST00000488171 CYP2J2P51589 502 aa20.73■□□□□ 0.91
CD55-209ENST00000488171 SNRPFP62306 86 aaKnown RBP20.73■□□□□ 0.91
CD55-209ENST00000488171 MTAPQ13126 283 aa20.73■□□□□ 0.91
CD55-209ENST00000488171 SDHAF4Q5VUM1 108 aa20.73■□□□□ 0.91
CD55-209ENST00000488171 DPH6Q7L8W6 267 aa20.73■□□□□ 0.91
CD55-209ENST00000488171 CSGALNACT1Q8TDX6 532 aa20.73■□□□□ 0.91
CD55-209ENST00000488171 KBTBD7Q8WVZ9 684 aa20.73■□□□□ 0.91
CD55-209ENST00000488171 ZFYVE19Q96K21 471 aa20.73■□□□□ 0.91
CD55-209ENST00000488171 GCNAQ96QF7 691 aa20.73■□□□□ 0.91
CD55-209ENST00000488171 SERTAD1Q9UHV2 236 aa20.73■□□□□ 0.91
CD55-209ENST00000488171 OBSL1O75147 1896 aa20.73■□□□□ 0.91
CD55-209ENST00000488171 MYBPHLA2RUH7 354 aa20.72■□□□□ 0.91
CD55-209ENST00000488171 ACTN4O43707 911 aaKnown RBP20.72■□□□□ 0.91
CD55-209ENST00000488171 SLFN14P0C7P3 912 aa20.72■□□□□ 0.91
CD55-209ENST00000488171 CCNE1P24864 410 aa20.72■□□□□ 0.91
CD55-209ENST00000488171 PCSK1P29120 753 aa20.72■□□□□ 0.91
CD55-209ENST00000488171 CSTF1Q05048 431 aaKnown RBP20.72■□□□□ 0.91
CD55-209ENST00000488171 CYP24A1Q07973 514 aa20.72■□□□□ 0.91
CD55-209ENST00000488171 PSMD6Q15008 389 aa20.72■□□□□ 0.91
CD55-209ENST00000488171 DDR2Q16832 855 aa20.72■□□□□ 0.91
CD55-209ENST00000488171 TRAPPC11Q7Z392 1133 aa20.72■□□□□ 0.91
CD55-209ENST00000488171 CMTM8Q8IZV2 173 aa20.72■□□□□ 0.91
CD55-209ENST00000488171 XXYLT1Q8NBI6 393 aa20.72■□□□□ 0.91
CD55-209ENST00000488171 SMG9Q9H0W8 520 aaKnown RBP20.72■□□□□ 0.91
CD55-209ENST00000488171 GZF1Q9H116 711 aaPredicted RBP20.72■□□□□ 0.91
CD55-209ENST00000488171 CHRDQ9H2X0 955 aa20.72■□□□□ 0.91
CD55-209ENST00000488171 PRMT8Q9NR22 394 aaPredicted RBP20.72■□□□□ 0.91
CD55-209ENST00000488171 R3HCC1Q9Y3T6 440 aaKnown RBP20.72■□□□□ 0.91
CD55-209ENST00000488171 KIF26AQ9ULI4 1882 aaPredicted RBP20.72■□□□□ 0.91
CD55-209ENST00000488171 SLC38A8A6NNN8 435 aa20.72■□□□□ 0.91
CD55-209ENST00000488171 KLRC4O43908 158 aa20.72■□□□□ 0.91
CD55-209ENST00000488171 ATP2C2O75185 946 aa20.72■□□□□ 0.91
CD55-209ENST00000488171 CSH1P0DML2 217 aa20.72■□□□□ 0.91
CD55-209ENST00000488171 CSH2P0DML3 217 aa20.72■□□□□ 0.91
CD55-209ENST00000488171 DLATP10515 647 aaKnown RBP20.72■□□□□ 0.91
CD55-209ENST00000488171 LMO2P25791 158 aa20.72■□□□□ 0.91
CD55-209ENST00000488171 SOX9P48436 509 aa20.72■□□□□ 0.91
CD55-209ENST00000488171 KNOP1Q1ED39 458 aaKnown RBP20.72■□□□□ 0.91
CD55-209ENST00000488171 CFAP221Q4G0U5 840 aa20.72■□□□□ 0.91
CD55-209ENST00000488171 ARHGAP29Q52LW3 1261 aa20.72■□□□□ 0.91
CD55-209ENST00000488171 FAM171BQ6P995 826 aa20.72■□□□□ 0.91
CD55-209ENST00000488171 HS2ST1Q7LGA3 356 aa20.72■□□□□ 0.91
CD55-209ENST00000488171 C12orf56Q8IXR9 622 aa20.72■□□□□ 0.91
CD55-209ENST00000488171 CEP57L1Q8IYX8 460 aa20.72■□□□□ 0.91
CD55-209ENST00000488171 BPIFB1Q8TDL5 484 aa20.72■□□□□ 0.91
CD55-209ENST00000488171 CHAMP1Q96JM3 812 aa20.72■□□□□ 0.91
CD55-209ENST00000488171 CGRRF1Q99675 332 aa20.72■□□□□ 0.91
CD55-209ENST00000488171 MAGED2Q9UNF1 606 aaPredicted RBP20.72■□□□□ 0.91
CD55-209ENST00000488171 ZDHHC9Q9Y397 364 aa20.72■□□□□ 0.91
CD55-209ENST00000488171 TADA3O75528 432 aa20.71■□□□□ 0.91
CD55-209ENST00000488171 NOL4O94818 638 aa20.71■□□□□ 0.91
CD55-209ENST00000488171 CST3P01034 146 aaPredicted RBP20.71■□□□□ 0.91
CD55-209ENST00000488171 CHRNB1P11230 501 aa20.71■□□□□ 0.91
CD55-209ENST00000488171 TNNI1P19237 187 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms