RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 KPNA5O15131 536 aa3.57□□□□□ -1.84
R3HDM1-219ENST00000488035 FRS3O43559 492 aa3.57□□□□□ -1.84
R3HDM1-219ENST00000488035 RBMXL2O75526 392 aaKnown RBP3.57□□□□□ -1.84
R3HDM1-219ENST00000488035 UNC5CO95185 931 aa3.57□□□□□ -1.84
R3HDM1-219ENST00000488035 KIF20AO95235 890 aa3.57□□□□□ -1.84
R3HDM1-219ENST00000488035 NBPF7P0C2Y1 421 aaPredicted RBP3.57□□□□□ -1.84
R3HDM1-219ENST00000488035 SPATA31D3P0C874 917 aa3.57□□□□□ -1.84
R3HDM1-219ENST00000488035 CKBP12277 381 aa3.57□□□□□ -1.84
R3HDM1-219ENST00000488035 BRAFP15056 766 aa3.57□□□□□ -1.84
R3HDM1-219ENST00000488035 PHKG2P15735 406 aa3.57□□□□□ -1.84
R3HDM1-219ENST00000488035 HOXB6P17509 224 aaKnown RBP3.57□□□□□ -1.84
R3HDM1-219ENST00000488035 EN2P19622 333 aaPredicted RBP3.57□□□□□ -1.84
R3HDM1-219ENST00000488035 DDX6P26196 483 aaKnown RBP eCLIP3.57□□□□□ -1.84
R3HDM1-219ENST00000488035 MGAT1P26572 445 aa3.57□□□□□ -1.84
R3HDM1-219ENST00000488035 PRIM2P49643 509 aa3.57□□□□□ -1.84
R3HDM1-219ENST00000488035 TOB1P50616 345 aaPredicted RBP3.57□□□□□ -1.84
R3HDM1-219ENST00000488035 ALDH5A1P51649 535 aaPredicted RBP3.57□□□□□ -1.84
R3HDM1-219ENST00000488035 HSD11B2P80365 405 aa3.57□□□□□ -1.84
R3HDM1-219ENST00000488035 MC2RQ01718 297 aa3.57□□□□□ -1.84
R3HDM1-219ENST00000488035 OCA2Q04671 838 aa3.57□□□□□ -1.84
R3HDM1-219ENST00000488035 CNGA2Q16280 664 aa3.57□□□□□ -1.84
R3HDM1-219ENST00000488035 LONRF1Q17RB8 773 aa3.57□□□□□ -1.84
R3HDM1-219ENST00000488035 TSHZ3Q63HK5 1081 aa3.57□□□□□ -1.84
R3HDM1-219ENST00000488035 ARMC6Q6NXE6 501 aa3.57□□□□□ -1.84
R3HDM1-219ENST00000488035 SPATA31D4Q6ZUB0 917 aa3.57□□□□□ -1.84
R3HDM1-219ENST00000488035 SKAP1Q86WV1 359 aa3.57□□□□□ -1.84
R3HDM1-219ENST00000488035 PDSS2Q86YH6 399 aa3.57□□□□□ -1.84
R3HDM1-219ENST00000488035 RHOT2Q8IXI1 618 aa3.57□□□□□ -1.84
R3HDM1-219ENST00000488035 Q8N9P0 234 aaPredicted RBP3.57□□□□□ -1.84
R3HDM1-219ENST00000488035 CPEB3Q8NE35 698 aaKnown RBP3.57□□□□□ -1.84
R3HDM1-219ENST00000488035 OR56A1Q8NGH5 318 aa3.57□□□□□ -1.84
R3HDM1-219ENST00000488035 C1QTNF7Q9BXJ2 289 aa3.57□□□□□ -1.84
R3HDM1-219ENST00000488035 DPH1Q9BZG8 443 aa3.57□□□□□ -1.84
R3HDM1-219ENST00000488035 KIAA1586Q9HCI6 787 aa3.57□□□□□ -1.84
R3HDM1-219ENST00000488035 GNL3LQ9NVN8 582 aaKnown RBP3.57□□□□□ -1.84
R3HDM1-219ENST00000488035 RLIMQ9NVW2 624 aa3.57□□□□□ -1.84
R3HDM1-219ENST00000488035 PIH1D1Q9NWS0 290 aaKnown RBP3.57□□□□□ -1.84
R3HDM1-219ENST00000488035 COL20A1Q9P218 1284 aa3.57□□□□□ -1.84
R3HDM1-219ENST00000488035 CFAP97Q9P2B7 532 aa3.57□□□□□ -1.84
R3HDM1-219ENST00000488035 COL3A1P02461 1466 aaPredicted RBP3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 BTN3A1O00481 513 aa3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 PLIN1O60240 522 aa3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 MGEA5O60502 916 aa3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 VPS4BO75351 444 aa3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 PIM1P11309 404 aaPredicted RBP3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 CHRM3P20309 590 aa3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 FGFR4P22455 802 aa3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 TM4SF4P48230 202 aa3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 KCNJ5P48544 419 aa3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 ZNF81P51508 661 aa3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 CASP5P51878 434 aa3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 CTBP1Q13363 440 aa3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 PICALMQ13492 652 aa3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 HABP2Q14520 560 aaPredicted RBP3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 XRRA1Q6P2D8 792 aa3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 PPP1R32Q7Z5V6 425 aa3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 USP37Q86T82 979 aa3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 MICU3Q86XE3 530 aa3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 LIX1LQ8IVB5 337 aa3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 CFAP52Q8N1V2 620 aa3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 FAM46DQ8NEK8 389 aa3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 FBXO41Q8TF61 875 aa3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 ZNF384Q8TF68 577 aa3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 NUP133Q8WUM0 1156 aa3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 KBTBD7Q8WVZ9 684 aa3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 PMM1Q92871 262 aa3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 PHKBQ93100 1093 aa3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 SCAMP4Q969E2 229 aa3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 STRBPQ96SI9 672 aaKnown RBP3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 MPHOSPH6Q99547 160 aaKnown RBP3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 KRTAP2-2Q9BYT5 123 aa3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 LRRC27Q9C0I9 530 aa3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 NUP62CLQ9H1M0 184 aa3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 AS3MTQ9HBK9 375 aa3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 CNNM1Q9NRU3 951 aa3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 SACM1LQ9NTJ5 587 aa3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 ETAA1Q9NY74 926 aa3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 RNF181Q9P0P0 153 aa3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 CTTNBP2NLQ9P2B4 639 aa3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 TBC1D30Q9Y2I9 924 aa3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 MAP3K2Q9Y2U5 619 aa3.56□□□□□ -1.84
R3HDM1-219ENST00000488035 MAST3O60307 1309 aa3.55□□□□□ -1.84
R3HDM1-219ENST00000488035 A0A1B0GTW7 788 aa3.55□□□□□ -1.84
R3HDM1-219ENST00000488035 MARCH11A6NNE9 402 aa3.55□□□□□ -1.84
R3HDM1-219ENST00000488035 RHPN2P1A8MT19 583 aa3.55□□□□□ -1.84
R3HDM1-219ENST00000488035 NCK2O43639 380 aa3.55□□□□□ -1.84
R3HDM1-219ENST00000488035 GRPP07492 148 aa3.55□□□□□ -1.84
R3HDM1-219ENST00000488035 EGR2P11161 476 aaPredicted RBP3.55□□□□□ -1.84
R3HDM1-219ENST00000488035 FDXRP22570 491 aa3.55□□□□□ -1.84
R3HDM1-219ENST00000488035 PLA2G5P39877 138 aa3.55□□□□□ -1.84
R3HDM1-219ENST00000488035 MPLP40238 635 aa3.55□□□□□ -1.84
R3HDM1-219ENST00000488035 SLC11A2P49281 568 aa3.55□□□□□ -1.84
R3HDM1-219ENST00000488035 UCP3P55916 312 aa3.55□□□□□ -1.84
R3HDM1-219ENST00000488035 RPS16P62249 146 aaKnown RBP3.55□□□□□ -1.84
R3HDM1-219ENST00000488035 HTRA4P83105 476 aaPredicted RBP3.55□□□□□ -1.84
R3HDM1-219ENST00000488035 ZNF543Q08ER8 600 aa3.55□□□□□ -1.84
R3HDM1-219ENST00000488035 SLC13A2Q13183 592 aa3.55□□□□□ -1.84
R3HDM1-219ENST00000488035 KLHDC7AQ5VTJ3 777 aa3.55□□□□□ -1.84
R3HDM1-219ENST00000488035 B3GNTL1Q67FW5 361 aaPredicted RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms