RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 FUBP3Q96I24 572 aaKnown RBP eCLIP11.73□□□□□ -0.53
HDLBP-242ENST00000488013 HNRNPABQ99729 332 aaKnown RBP11.73□□□□□ -0.53
HDLBP-242ENST00000488013 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.73□□□□□ -0.53
HDLBP-242ENST00000488013 ELOVL4Q9GZR5 314 aa11.73□□□□□ -0.53
HDLBP-242ENST00000488013 LMAN2LQ9H0V9 348 aa11.73□□□□□ -0.53
HDLBP-242ENST00000488013 SLC28A3Q9HAS3 691 aa11.73□□□□□ -0.53
HDLBP-242ENST00000488013 ABCB6Q9NP58 842 aa11.73□□□□□ -0.53
HDLBP-242ENST00000488013 HSFX1Q9UBD0 423 aa11.73□□□□□ -0.53
HDLBP-242ENST00000488013 CACNG4Q9UBN1 327 aa11.73□□□□□ -0.53
HDLBP-242ENST00000488013 NOCTQ9UK39 431 aaKnown RBP11.73□□□□□ -0.53
HDLBP-242ENST00000488013 EPN1Q9Y6I3 576 aaPredicted RBP11.73□□□□□ -0.53
HDLBP-242ENST00000488013 EIF3CLB5ME19 914 aaKnown RBP11.72□□□□□ -0.53
HDLBP-242ENST00000488013 I3L4J1 428 aa11.72□□□□□ -0.53
HDLBP-242ENST00000488013 O00370 1275 aa11.72□□□□□ -0.53
HDLBP-242ENST00000488013 CA3P07451 260 aa11.72□□□□□ -0.53
HDLBP-242ENST00000488013 LINC00271P0C7V0 271 aa11.72□□□□□ -0.53
HDLBP-242ENST00000488013 CTSAP10619 480 aa11.72□□□□□ -0.53
HDLBP-242ENST00000488013 EIF4A3P38919 411 aaKnown RBP11.72□□□□□ -0.53
HDLBP-242ENST00000488013 PBX3P40426 434 aa11.72□□□□□ -0.53
HDLBP-242ENST00000488013 RABGGTBP53611 331 aa11.72□□□□□ -0.53
HDLBP-242ENST00000488013 TPGS2Q68CL5 300 aa11.72□□□□□ -0.53
HDLBP-242ENST00000488013 SLC8B1Q6J4K2 584 aa11.72□□□□□ -0.53
HDLBP-242ENST00000488013 FAM171BQ6P995 826 aa11.72□□□□□ -0.53
HDLBP-242ENST00000488013 ACOT1Q86TX2 421 aa11.72□□□□□ -0.53
HDLBP-242ENST00000488013 TMEM173Q86WV6 379 aaPredicted RBP11.72□□□□□ -0.53
HDLBP-242ENST00000488013 ANKRD52Q8NB46 1076 aa11.72□□□□□ -0.53
HDLBP-242ENST00000488013 KLHL23Q8NBE8 558 aa11.72□□□□□ -0.53
HDLBP-242ENST00000488013 STK32AQ8WU08 396 aa11.72□□□□□ -0.53
HDLBP-242ENST00000488013 RIN2Q8WYP3 895 aaPredicted RBP11.72□□□□□ -0.53
HDLBP-242ENST00000488013 ELMO3Q96BJ8 720 aa11.72□□□□□ -0.53
HDLBP-242ENST00000488013 CYFIP2Q96F07 1278 aa11.72□□□□□ -0.53
HDLBP-242ENST00000488013 TRIM11Q96F44 468 aa11.72□□□□□ -0.53
HDLBP-242ENST00000488013 CEP295NLQ96MC4 621 aa11.72□□□□□ -0.53
HDLBP-242ENST00000488013 EIF3CQ99613 913 aaKnown RBP11.72□□□□□ -0.53
HDLBP-242ENST00000488013 EMILIN2Q9BXX0 1053 aa11.72□□□□□ -0.53
HDLBP-242ENST00000488013 UBXN6Q9BZV1 441 aa11.72□□□□□ -0.53
HDLBP-242ENST00000488013 ZCWPW1Q9H0M4 648 aa11.72□□□□□ -0.53
HDLBP-242ENST00000488013 FNIP2Q9P278 1114 aa11.72□□□□□ -0.53
HDLBP-242ENST00000488013 ARHGAP20Q9P2F6 1191 aa11.72□□□□□ -0.53
HDLBP-242ENST00000488013 HCSTQ9UBK5 93 aa11.72□□□□□ -0.53
HDLBP-242ENST00000488013 MTRRQ9UBK8 725 aa11.72□□□□□ -0.53
HDLBP-242ENST00000488013 TIMM13Q9Y5L4 95 aaPredicted RBP11.72□□□□□ -0.53
HDLBP-242ENST00000488013 IRAK3Q9Y616 596 aa11.72□□□□□ -0.53
HDLBP-242ENST00000488013 RALGAPA2Q2PPJ7 1873 aa11.72□□□□□ -0.53
HDLBP-242ENST00000488013 LTBP2Q14767 1821 aa11.72□□□□□ -0.53
HDLBP-242ENST00000488013 LCHNA4D1U4 455 aa11.71□□□□□ -0.53
HDLBP-242ENST00000488013 F8W810 466 aa11.71□□□□□ -0.53
HDLBP-242ENST00000488013 RBAK-RBAKDNI3L0D1 243 aa11.71□□□□□ -0.53
HDLBP-242ENST00000488013 TBC1D4O60343 1298 aa11.71□□□□□ -0.53
HDLBP-242ENST00000488013 NDUFA10O95299 355 aa11.71□□□□□ -0.53
HDLBP-242ENST00000488013 LCA5LO95447 670 aa11.71□□□□□ -0.53
HDLBP-242ENST00000488013 LMO2P25791 158 aa11.71□□□□□ -0.53
HDLBP-242ENST00000488013 NSFP46459 744 aaKnown RBP11.71□□□□□ -0.53
HDLBP-242ENST00000488013 KIF11P52732 1056 aa11.71□□□□□ -0.53
HDLBP-242ENST00000488013 BCAT1P54687 386 aa11.71□□□□□ -0.53
HDLBP-242ENST00000488013 GPR17Q13304 367 aa11.71□□□□□ -0.53
HDLBP-242ENST00000488013 SMC1AQ14683 1233 aaKnown RBP11.71□□□□□ -0.53
HDLBP-242ENST00000488013 PSMD5Q16401 504 aa11.71□□□□□ -0.53
HDLBP-242ENST00000488013 CFAP221Q4G0U5 840 aa11.71□□□□□ -0.53
HDLBP-242ENST00000488013 RTP2Q5QGT7 225 aa11.71□□□□□ -0.53
HDLBP-242ENST00000488013 KIAA0319Q5VV43 1072 aa11.71□□□□□ -0.53
HDLBP-242ENST00000488013 PPP2R2DQ66LE6 453 aa11.71□□□□□ -0.53
HDLBP-242ENST00000488013 ELMSAN1Q6PJG2 1045 aa11.71□□□□□ -0.53
HDLBP-242ENST00000488013 VSTM1Q6UX27 236 aa11.71□□□□□ -0.53
HDLBP-242ENST00000488013 RTL10Q7L3V2 364 aa11.71□□□□□ -0.53
HDLBP-242ENST00000488013 ZNF571Q7Z3V5 609 aaPredicted RBP11.71□□□□□ -0.53
HDLBP-242ENST00000488013 NOP9Q86U38 636 aaKnown RBP11.71□□□□□ -0.53
HDLBP-242ENST00000488013 OSTM1Q86WC4 334 aa11.71□□□□□ -0.53
HDLBP-242ENST00000488013 SPATA2LQ8IUW3 424 aaPredicted RBP11.71□□□□□ -0.53
HDLBP-242ENST00000488013 TMEM130Q8N3G9 435 aa11.71□□□□□ -0.53
HDLBP-242ENST00000488013 FBXO22Q8NEZ5 403 aa11.71□□□□□ -0.53
HDLBP-242ENST00000488013 LNX1Q8TBB1 728 aaPredicted RBP11.71□□□□□ -0.53
HDLBP-242ENST00000488013 DDX1Q92499 740 aaKnown RBP11.71□□□□□ -0.53
HDLBP-242ENST00000488013 SMARCD1Q96GM5 515 aa11.71□□□□□ -0.53
HDLBP-242ENST00000488013 VCPIP1Q96JH7 1222 aa11.71□□□□□ -0.53
HDLBP-242ENST00000488013 CALR3Q96L12 384 aaKnown RBP11.71□□□□□ -0.53
HDLBP-242ENST00000488013 TWNKQ96RR1 684 aa11.71□□□□□ -0.53
HDLBP-242ENST00000488013 SYT11Q9BT88 431 aa11.71□□□□□ -0.53
HDLBP-242ENST00000488013 PBX4Q9BYU1 374 aa11.71□□□□□ -0.53
HDLBP-242ENST00000488013 PRO3102Q9H379 93 aa11.71□□□□□ -0.53
HDLBP-242ENST00000488013 RXFP1Q9HBX9 757 aa11.71□□□□□ -0.53
HDLBP-242ENST00000488013 CYLDQ9NQC7 956 aa11.71□□□□□ -0.53
HDLBP-242ENST00000488013 SEPT11Q9NVA2 429 aaKnown RBP11.71□□□□□ -0.53
HDLBP-242ENST00000488013 ADAMTS1Q9UHI8 967 aa11.71□□□□□ -0.53
HDLBP-242ENST00000488013 DPP7Q9UHL4 492 aa11.71□□□□□ -0.53
HDLBP-242ENST00000488013 METRNQ9UJH8 293 aa11.71□□□□□ -0.53
HDLBP-242ENST00000488013 INTUQ9ULD6 942 aa11.71□□□□□ -0.53
HDLBP-242ENST00000488013 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.71□□□□□ -0.53
HDLBP-242ENST00000488013 SCN5AQ14524 2016 aa11.7□□□□□ -0.54
HDLBP-242ENST00000488013 TMEM265A0A087WTH1 108 aa11.7□□□□□ -0.54
HDLBP-242ENST00000488013 H3BNC9 293 aa11.7□□□□□ -0.54
HDLBP-242ENST00000488013 STK25O00506 426 aa11.7□□□□□ -0.54
HDLBP-242ENST00000488013 ZSCAN12O43309 604 aa11.7□□□□□ -0.54
HDLBP-242ENST00000488013 ADH1AP07327 375 aa11.7□□□□□ -0.54
HDLBP-242ENST00000488013 CCDC175P0C221 793 aa11.7□□□□□ -0.54
HDLBP-242ENST00000488013 FAM200BP0CF97 657 aa11.7□□□□□ -0.54
HDLBP-242ENST00000488013 PNMA6AP0CW24 399 aaPredicted RBP11.7□□□□□ -0.54
HDLBP-242ENST00000488013 MYBL1P10243 752 aa11.7□□□□□ -0.54
HDLBP-242ENST00000488013 C7P10643 843 aa11.7□□□□□ -0.54
HDLBP-242ENST00000488013 IGFBP6P24592 240 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms