RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 TUBGCP4Q9UGJ1 667 aa6.41□□□□□ -1.38
COL4A3-206ENST00000487633 ICE1Q9Y2F5 2266 aa6.41□□□□□ -1.38
COL4A3-206ENST00000487633 ARID1BQ8NFD5 2236 aaPredicted RBP6.4□□□□□ -1.38
COL4A3-206ENST00000487633 LRRIQ4A6NIV6 560 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 M0R2N6 131 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 TERTO14746 1132 aaKnown RBP6.4□□□□□ -1.38
COL4A3-206ENST00000487633 TRIM24O15164 1050 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 CILPO75339 1184 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 SLITRK3O94933 977 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 IGHDP01880 384 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 P4HBP07237 508 aaKnown RBP6.4□□□□□ -1.38
COL4A3-206ENST00000487633 MYF5P13349 255 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 HMGA1P17096 107 aaKnown RBP6.4□□□□□ -1.38
COL4A3-206ENST00000487633 ADSSP30520 456 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 MCM5P33992 734 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 EPHB3P54753 998 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 POU5F1BQ06416 359 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 KCNH2Q12809 1159 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 PPP2R5CQ13362 524 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 MTF1Q14872 753 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 ZNF77Q15935 545 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 RTN1Q16799 776 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 CCDC142Q17RM4 750 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 KCNT1Q5JUK3 1230 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 KIAA1614Q5VZ46 1190 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 CDCA2Q69YH5 1023 aaPredicted RBP6.4□□□□□ -1.38
COL4A3-206ENST00000487633 ZNF280DQ6N043 979 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 LAYNQ6UX15 382 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 USP49Q70CQ1 688 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 PRICKLE2Q7Z3G6 844 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 C11orf74Q86VG3 221 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 LRRTM3Q86VH5 581 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 ERICH1Q86X53 443 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 C4orf19Q8IY42 314 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 EFCAB13Q8IY85 973 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 HACE1Q8IYU2 909 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 OR10T2Q8NGX3 314 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 RHBDD1Q8TEB9 315 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 PIGOQ8TEQ8 1089 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 WHAMMQ8TF30 809 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 TMEM87BQ96K49 555 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 ACOX2Q99424 681 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 NFKBIZQ9BYH8 718 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 GAREM1Q9H706 876 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 TM7SF3Q9NS93 570 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 CALCOCO1Q9P1Z2 691 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 BCCIPQ9P287 314 aaKnown RBP eCLIP6.4□□□□□ -1.38
COL4A3-206ENST00000487633 NXF1Q9UBU9 619 aaKnown RBP6.4□□□□□ -1.38
COL4A3-206ENST00000487633 CYP8B1Q9UNU6 501 aa6.4□□□□□ -1.38
COL4A3-206ENST00000487633 PLXNA2O75051 1894 aa6.4□□□□□ -1.39
COL4A3-206ENST00000487633 NOTCH2Q04721 2471 aa6.4□□□□□ -1.39
COL4A3-206ENST00000487633 COL27A1Q8IZC6 1860 aaPredicted RBP6.39□□□□□ -1.39
COL4A3-206ENST00000487633 FBN2P35556 2912 aa6.39□□□□□ -1.39
COL4A3-206ENST00000487633 CYP3A7-CYP3A51PA0A087WV96 503 aa6.39□□□□□ -1.39
COL4A3-206ENST00000487633 GOLGA8AA7E2F4 631 aa6.39□□□□□ -1.39
COL4A3-206ENST00000487633 GOLGA8BA8MQT2 603 aa6.39□□□□□ -1.39
COL4A3-206ENST00000487633 H7C4K7 107 aa6.39□□□□□ -1.39
COL4A3-206ENST00000487633 ABLIM1O14639 778 aa6.39□□□□□ -1.39
COL4A3-206ENST00000487633 SLC27A2O14975 620 aa6.39□□□□□ -1.39
COL4A3-206ENST00000487633 USO1O60763 962 aaKnown RBP6.39□□□□□ -1.39
COL4A3-206ENST00000487633 HLA-EP13747 358 aa6.39□□□□□ -1.39
COL4A3-206ENST00000487633 CPA1P15085 419 aa6.39□□□□□ -1.39
COL4A3-206ENST00000487633 CYP3A7P24462 503 aa6.39□□□□□ -1.39
COL4A3-206ENST00000487633 CHMLP26374 656 aa6.39□□□□□ -1.39
COL4A3-206ENST00000487633 MCM4P33991 863 aa6.39□□□□□ -1.39
COL4A3-206ENST00000487633 USP11P51784 963 aa6.39□□□□□ -1.39
COL4A3-206ENST00000487633 NLRP12P59046 1061 aa6.39□□□□□ -1.39
COL4A3-206ENST00000487633 EXOSC10Q01780 885 aaKnown RBP6.39□□□□□ -1.39
COL4A3-206ENST00000487633 SCRN1Q12765 414 aa6.39□□□□□ -1.39
COL4A3-206ENST00000487633 TARDBPQ13148 414 aaKnown RBP eCLIP6.39□□□□□ -1.39
COL4A3-206ENST00000487633 DNAJC3Q13217 504 aa6.39□□□□□ -1.39
COL4A3-206ENST00000487633 GPR17Q13304 367 aa6.39□□□□□ -1.39
COL4A3-206ENST00000487633 MXD4Q14582 209 aaPredicted RBP6.39□□□□□ -1.39
COL4A3-206ENST00000487633 PCBP1Q15365 356 aaKnown RBP eCLIP6.39□□□□□ -1.39
COL4A3-206ENST00000487633 FAM187BQ17R55 369 aa6.39□□□□□ -1.39
COL4A3-206ENST00000487633 KIF26BQ2KJY2 2108 aa6.39□□□□□ -1.39
COL4A3-206ENST00000487633 HLA-BQ31612 363 aa6.39□□□□□ -1.39
COL4A3-206ENST00000487633 ADCK5Q3MIX3 580 aa6.39□□□□□ -1.39
COL4A3-206ENST00000487633 LRRC69Q6ZNQ3 347 aa6.39□□□□□ -1.39
COL4A3-206ENST00000487633 TPH2Q8IWU9 490 aa6.39□□□□□ -1.39
COL4A3-206ENST00000487633 PGBD3Q8N328 593 aa6.39□□□□□ -1.39
COL4A3-206ENST00000487633 PHTF2Q8N3S3 785 aa6.39□□□□□ -1.39
COL4A3-206ENST00000487633 ZCCHC9Q8N567 271 aaKnown RBP6.39□□□□□ -1.39
COL4A3-206ENST00000487633 EXD3Q8N9H8 876 aa6.39□□□□□ -1.39
COL4A3-206ENST00000487633 SNIP1Q8TAD8 396 aaKnown RBP6.39□□□□□ -1.39
COL4A3-206ENST00000487633 CEP76Q8TAP6 659 aa6.39□□□□□ -1.39
COL4A3-206ENST00000487633 OSCP1Q8WVF1 389 aa6.39□□□□□ -1.39
COL4A3-206ENST00000487633 AIFM3Q96NN9 605 aa6.39□□□□□ -1.39
COL4A3-206ENST00000487633 SEPT5Q99719 369 aaPredicted RBP6.39□□□□□ -1.39
COL4A3-206ENST00000487633 C6orf50Q9HD87 102 aa6.39□□□□□ -1.39
COL4A3-206ENST00000487633 KCNMB3Q9NPA1 279 aa6.39□□□□□ -1.39
COL4A3-206ENST00000487633 TDP1Q9NUW8 608 aa6.39□□□□□ -1.39
COL4A3-206ENST00000487633 TMLHEQ9NVH6 421 aa6.39□□□□□ -1.39
COL4A3-206ENST00000487633 THG1LQ9NWX6 298 aaKnown RBP6.39□□□□□ -1.39
COL4A3-206ENST00000487633 DUS2Q9NX74 493 aaKnown RBP6.39□□□□□ -1.39
COL4A3-206ENST00000487633 TPCN1Q9ULQ1 816 aa6.39□□□□□ -1.39
COL4A3-206ENST00000487633 CREBBPQ92793 2442 aa6.39□□□□□ -1.39
COL4A3-206ENST00000487633 MYH10P35580 1976 aa6.38□□□□□ -1.39
COL4A3-206ENST00000487633 CKAP5Q14008 2032 aa6.38□□□□□ -1.39
COL4A3-206ENST00000487633 DOCK9Q9BZ29 2069 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms