RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 CCL16O15467 120 aa15.62■□□□□ 0.09
LIMS3-205ENST00000487150 MAGEA11P43364 429 aa15.62■□□□□ 0.09
LIMS3-205ENST00000487150 TYRO3Q06418 890 aa15.62■□□□□ 0.09
LIMS3-205ENST00000487150 INCA1Q0VD86 236 aa15.62■□□□□ 0.09
LIMS3-205ENST00000487150 TWF1Q12792 350 aa15.62■□□□□ 0.09
LIMS3-205ENST00000487150 KCNH2Q12809 1159 aa15.62■□□□□ 0.09
LIMS3-205ENST00000487150 MAN2A1Q16706 1144 aa15.62■□□□□ 0.09
LIMS3-205ENST00000487150 PABPC1LQ4VXU2 614 aaKnown RBP15.62■□□□□ 0.09
LIMS3-205ENST00000487150 CYP4A22Q5TCH4 519 aa15.62■□□□□ 0.09
LIMS3-205ENST00000487150 FAM171BQ6P995 826 aa15.62■□□□□ 0.09
LIMS3-205ENST00000487150 ATAD1Q8NBU5 361 aa15.62■□□□□ 0.09
LIMS3-205ENST00000487150 B3GALNT2Q8NCR0 500 aa15.62■□□□□ 0.09
LIMS3-205ENST00000487150 MYCBPAPQ8TBZ2 947 aa15.62■□□□□ 0.09
LIMS3-205ENST00000487150 NT5C1BQ96P26 610 aa15.62■□□□□ 0.09
LIMS3-205ENST00000487150 MRPL45Q9BRJ2 306 aaKnown RBP15.62■□□□□ 0.09
LIMS3-205ENST00000487150 POMKQ9H5K3 350 aa15.62■□□□□ 0.09
LIMS3-205ENST00000487150 ASAH2Q9NR71 780 aa15.62■□□□□ 0.09
LIMS3-205ENST00000487150 NFE2L3Q9Y4A8 694 aa15.62■□□□□ 0.09
LIMS3-205ENST00000487150 UNC80Q8N2C7 3258 aa15.62■□□□□ 0.09
LIMS3-205ENST00000487150 GTPBP10A4D1E9 387 aaKnown RBP15.61■□□□□ 0.09
LIMS3-205ENST00000487150 SEC24AO95486 1093 aa15.61■□□□□ 0.09
LIMS3-205ENST00000487150 CAVIN2O95810 425 aa15.61■□□□□ 0.09
LIMS3-205ENST00000487150 HAPLN1P10915 354 aaPredicted RBP15.61■□□□□ 0.09
LIMS3-205ENST00000487150 PTPN2P17706 415 aa15.61■□□□□ 0.09
LIMS3-205ENST00000487150 FSHRP23945 695 aa15.61■□□□□ 0.09
LIMS3-205ENST00000487150 ACAT1P24752 427 aaKnown RBP15.61■□□□□ 0.09
LIMS3-205ENST00000487150 SSTR3P32745 418 aaPredicted RBP15.61■□□□□ 0.09
LIMS3-205ENST00000487150 TAF12Q16514 161 aa15.61■□□□□ 0.09
LIMS3-205ENST00000487150 PDZD4Q76G19 769 aaPredicted RBP15.61■□□□□ 0.09
LIMS3-205ENST00000487150 OSTM1Q86WC4 334 aa15.61■□□□□ 0.09
LIMS3-205ENST00000487150 CREBRFQ8IUR6 639 aa15.61■□□□□ 0.09
LIMS3-205ENST00000487150 GCNAQ96QF7 691 aa15.61■□□□□ 0.09
LIMS3-205ENST00000487150 TMEM209Q96SK2 561 aa15.61■□□□□ 0.09
LIMS3-205ENST00000487150 PKMYT1Q99640 499 aa15.61■□□□□ 0.09
LIMS3-205ENST00000487150 PI4K2AQ9BTU6 479 aa15.61■□□□□ 0.09
LIMS3-205ENST00000487150 NT5C1AQ9BXI3 368 aa15.61■□□□□ 0.09
LIMS3-205ENST00000487150 TSC2P49815 1807 aa15.61■□□□□ 0.09
LIMS3-205ENST00000487150 TRIM66O15016 1216 aa15.6■□□□□ 0.09
LIMS3-205ENST00000487150 MICAL2O94851 1124 aa15.6■□□□□ 0.09
LIMS3-205ENST00000487150 PDGFRBP09619 1106 aa15.6■□□□□ 0.09
LIMS3-205ENST00000487150 PTPN1P18031 435 aaKnown RBP15.6■□□□□ 0.09
LIMS3-205ENST00000487150 ANXA13P27216 316 aa15.6■□□□□ 0.09
LIMS3-205ENST00000487150 PSMC1P62191 440 aaKnown RBP15.6■□□□□ 0.09
LIMS3-205ENST00000487150 CUL2Q13617 745 aa15.6■□□□□ 0.09
LIMS3-205ENST00000487150 SCARA3Q6AZY7 606 aa15.6■□□□□ 0.09
LIMS3-205ENST00000487150 SPOPLQ6IQ16 392 aa15.6■□□□□ 0.09
LIMS3-205ENST00000487150 ENOSF1Q7L5Y1 443 aa15.6■□□□□ 0.09
LIMS3-205ENST00000487150 GRASPQ7Z6J2 395 aaPredicted RBP15.6■□□□□ 0.09
LIMS3-205ENST00000487150 GJD3Q8N144 294 aa15.6■□□□□ 0.09
LIMS3-205ENST00000487150 FAM200AQ8TCP9 573 aa15.6■□□□□ 0.09
LIMS3-205ENST00000487150 SEMA4DQ92854 862 aa15.6■□□□□ 0.09
LIMS3-205ENST00000487150 PSMG2Q969U7 264 aa15.6■□□□□ 0.09
LIMS3-205ENST00000487150 MYLPFQ96A32 169 aa15.6■□□□□ 0.09
LIMS3-205ENST00000487150 BPIFA3Q9BQP9 254 aa15.6■□□□□ 0.09
LIMS3-205ENST00000487150 APOBEC3GQ9HC16 384 aaKnown RBP15.6■□□□□ 0.09
LIMS3-205ENST00000487150 GCNT4Q9P109 453 aa15.6■□□□□ 0.09
LIMS3-205ENST00000487150 UXTQ9UBK9 157 aaPredicted RBP15.6■□□□□ 0.09
LIMS3-205ENST00000487150 ZMYM5Q9UJ78 669 aa15.6■□□□□ 0.09
LIMS3-205ENST00000487150 GTF3C4Q9UKN8 822 aa15.6■□□□□ 0.09
LIMS3-205ENST00000487150 SCN1AP35498 2009 aa15.6■□□□□ 0.09
LIMS3-205ENST00000487150 C19orf67A6NJJ6 358 aa15.59■□□□□ 0.09
LIMS3-205ENST00000487150 KCNJ18B7U540 433 aa15.59■□□□□ 0.09
LIMS3-205ENST00000487150 LOC730098B7Z3J9 87 aa15.59■□□□□ 0.09
LIMS3-205ENST00000487150 CILPO75339 1184 aa15.59■□□□□ 0.09
LIMS3-205ENST00000487150 RHOP08100 348 aa15.59■□□□□ 0.09
LIMS3-205ENST00000487150 WEE2P0C1S8 567 aa15.59■□□□□ 0.09
LIMS3-205ENST00000487150 CSH1P0DML2 217 aa15.59■□□□□ 0.09
LIMS3-205ENST00000487150 CSH2P0DML3 217 aa15.59■□□□□ 0.09
LIMS3-205ENST00000487150 LMO2P25791 158 aa15.59■□□□□ 0.09
LIMS3-205ENST00000487150 NDST1P52848 882 aa15.59■□□□□ 0.09
LIMS3-205ENST00000487150 CYP27A1Q02318 531 aa15.59■□□□□ 0.09
LIMS3-205ENST00000487150 GCNT1Q02742 428 aa15.59■□□□□ 0.09
LIMS3-205ENST00000487150 KCNJ12Q14500 433 aa15.59■□□□□ 0.09
LIMS3-205ENST00000487150 MDH1BQ5I0G3 518 aa15.59■□□□□ 0.09
LIMS3-205ENST00000487150 GBP6Q6ZN66 633 aa15.59■□□□□ 0.09
LIMS3-205ENST00000487150 LRRTM3Q86VH5 581 aa15.59■□□□□ 0.09
LIMS3-205ENST00000487150 ZDHHC14Q8IZN3 488 aa15.59■□□□□ 0.09
LIMS3-205ENST00000487150 NXPE3Q969Y0 559 aa15.59■□□□□ 0.09
LIMS3-205ENST00000487150 JAKMIP2Q96AA8 810 aa15.59■□□□□ 0.09
LIMS3-205ENST00000487150 PCED1BQ96HM7 432 aa15.59■□□□□ 0.09
LIMS3-205ENST00000487150 RPGRIP1Q96KN7 1286 aa15.59■□□□□ 0.09
LIMS3-205ENST00000487150 MED15Q96RN5 788 aa15.59■□□□□ 0.09
LIMS3-205ENST00000487150 TUBGCP2Q9BSJ2 902 aa15.59■□□□□ 0.09
LIMS3-205ENST00000487150 MRPS23Q9Y3D9 190 aaKnown RBP15.59■□□□□ 0.09
LIMS3-205ENST00000487150 REV3LO60673 3130 aa15.59■□□□□ 0.09
LIMS3-205ENST00000487150 MYBPHLA2RUH7 354 aa15.58■□□□□ 0.08
LIMS3-205ENST00000487150 SMTNL1A8MU46 457 aa15.58■□□□□ 0.08
LIMS3-205ENST00000487150 VNN2O95498 520 aa15.58■□□□□ 0.08
LIMS3-205ENST00000487150 CDC25CP30307 473 aa15.58■□□□□ 0.08
LIMS3-205ENST00000487150 GBP2P32456 591 aaPredicted RBP15.58■□□□□ 0.08
LIMS3-205ENST00000487150 RAP1GAPP47736 663 aa15.58■□□□□ 0.08
LIMS3-205ENST00000487150 EPHA5P54756 1037 aa15.58■□□□□ 0.08
LIMS3-205ENST00000487150 CDH8P55286 799 aa15.58■□□□□ 0.08
LIMS3-205ENST00000487150 TPM4P67936 248 aa15.58■□□□□ 0.08
LIMS3-205ENST00000487150 EXOC3L4Q17RC7 722 aa15.58■□□□□ 0.08
LIMS3-205ENST00000487150 TCP11X2Q5H9J9 407 aa15.58■□□□□ 0.08
LIMS3-205ENST00000487150 GET4Q7L5D6 327 aaPredicted RBP15.58■□□□□ 0.08
LIMS3-205ENST00000487150 CRYBG2Q8N1P7 616 aa15.58■□□□□ 0.08
LIMS3-205ENST00000487150 PPM1KQ8N3J5 372 aa15.58■□□□□ 0.08
LIMS3-205ENST00000487150 SMARCD1Q96GM5 515 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms