RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 GRAMD1CQ8IYS0 662 aa20.49■□□□□ 0.87
CLIP2-206ENST00000487091 ADGRF2Q8IZF7 708 aa20.49■□□□□ 0.87
CLIP2-206ENST00000487091 GIPC2Q8TF65 315 aa20.49■□□□□ 0.87
CLIP2-206ENST00000487091 CLDN23Q96B33 292 aa20.49■□□□□ 0.87
CLIP2-206ENST00000487091 SPATA32Q96LK8 384 aa20.49■□□□□ 0.87
CLIP2-206ENST00000487091 FNBP1Q96RU3 617 aa20.49■□□□□ 0.87
CLIP2-206ENST00000487091 PKMYT1Q99640 499 aa20.49■□□□□ 0.87
CLIP2-206ENST00000487091 TASP1Q9H6P5 420 aa20.49■□□□□ 0.87
CLIP2-206ENST00000487091 OBP2AQ9NY56 170 aa20.49■□□□□ 0.87
CLIP2-206ENST00000487091 ZMYM5Q9UJ78 669 aa20.49■□□□□ 0.87
CLIP2-206ENST00000487091 HPSEQ9Y251 543 aa20.49■□□□□ 0.87
CLIP2-206ENST00000487091 PTPRZ1P23471 2315 aaPredicted RBP20.48■□□□□ 0.87
CLIP2-206ENST00000487091 A0A1B0GVL5 298 aa20.48■□□□□ 0.87
CLIP2-206ENST00000487091 SHISA7A6NL88 538 aa20.48■□□□□ 0.87
CLIP2-206ENST00000487091 CHADO15335 359 aa20.48■□□□□ 0.87
CLIP2-206ENST00000487091 MYL1P05976 194 aa20.48■□□□□ 0.87
CLIP2-206ENST00000487091 PFKFB1P16118 471 aa20.48■□□□□ 0.87
CLIP2-206ENST00000487091 ACAT1P24752 427 aaKnown RBP20.48■□□□□ 0.87
CLIP2-206ENST00000487091 CDR1P51861 262 aa20.48■□□□□ 0.87
CLIP2-206ENST00000487091 MLLT6P55198 1093 aaPredicted RBP20.48■□□□□ 0.87
CLIP2-206ENST00000487091 PSMD2Q13200 908 aa20.48■□□□□ 0.87
CLIP2-206ENST00000487091 TRAPPC11Q7Z392 1133 aa20.48■□□□□ 0.87
CLIP2-206ENST00000487091 OSTM1Q86WC4 334 aa20.48■□□□□ 0.87
CLIP2-206ENST00000487091 GOLGA5Q8TBA6 731 aa20.48■□□□□ 0.87
CLIP2-206ENST00000487091 NKD2Q969F2 451 aaPredicted RBP20.48■□□□□ 0.87
CLIP2-206ENST00000487091 GCNAQ96QF7 691 aa20.48■□□□□ 0.87
CLIP2-206ENST00000487091 CGRRF1Q99675 332 aa20.48■□□□□ 0.87
CLIP2-206ENST00000487091 PI4K2AQ9BTU6 479 aa20.48■□□□□ 0.87
CLIP2-206ENST00000487091 GTF3C4Q9UKN8 822 aa20.48■□□□□ 0.87
CLIP2-206ENST00000487091 ATP6V1DQ9Y5K8 247 aa20.48■□□□□ 0.87
CLIP2-206ENST00000487091 RIF1Q5UIP0 2472 aaKnown RBP20.48■□□□□ 0.87
CLIP2-206ENST00000487091 NCANO14594 1321 aa20.48■□□□□ 0.87
CLIP2-206ENST00000487091 COL4A3Q01955 1670 aa20.48■□□□□ 0.87
CLIP2-206ENST00000487091 NUP210Q8TEM1 1887 aaPredicted RBP20.47■□□□□ 0.87
CLIP2-206ENST00000487091 ARNTLO00327 626 aa20.47■□□□□ 0.87
CLIP2-206ENST00000487091 CSH1P0DML2 217 aa20.47■□□□□ 0.87
CLIP2-206ENST00000487091 CSH2P0DML3 217 aa20.47■□□□□ 0.87
CLIP2-206ENST00000487091 DLATP10515 647 aaKnown RBP20.47■□□□□ 0.87
CLIP2-206ENST00000487091 HMGA1P17096 107 aaKnown RBP20.47■□□□□ 0.87
CLIP2-206ENST00000487091 TNNI1P19237 187 aa20.47■□□□□ 0.87
CLIP2-206ENST00000487091 TARSP26639 723 aaKnown RBP20.47■□□□□ 0.87
CLIP2-206ENST00000487091 RPS9P46781 194 aaKnown RBP20.47■□□□□ 0.87
CLIP2-206ENST00000487091 RPL10AP62906 217 aaKnown RBP20.47■□□□□ 0.87
CLIP2-206ENST00000487091 FCHO2Q0JRZ9 810 aa20.47■□□□□ 0.87
CLIP2-206ENST00000487091 CFAP221Q4G0U5 840 aa20.47■□□□□ 0.87
CLIP2-206ENST00000487091 YAF2Q8IY57 180 aa20.47■□□□□ 0.87
CLIP2-206ENST00000487091 RSPRY1Q96DX4 576 aa20.47■□□□□ 0.87
CLIP2-206ENST00000487091 FUBP3Q96I24 572 aaKnown RBP eCLIP20.47■□□□□ 0.87
CLIP2-206ENST00000487091 SEMA4AQ9H3S1 761 aa20.47■□□□□ 0.87
CLIP2-206ENST00000487091 EXOC1Q9NV70 894 aa20.47■□□□□ 0.87
CLIP2-206ENST00000487091 VPS13AQ96RL7 3174 aa20.47■□□□□ 0.87
CLIP2-206ENST00000487091 DENND4CQ5VZ89 1909 aa20.47■□□□□ 0.87
CLIP2-206ENST00000487091 FAM237AA0A1B0GTK4 181 aa20.46■□□□□ 0.87
CLIP2-206ENST00000487091 PRR23AA6NEV1 266 aa20.46■□□□□ 0.87
CLIP2-206ENST00000487091 DPYSL4O14531 572 aa20.46■□□□□ 0.87
CLIP2-206ENST00000487091 CST3P01034 146 aaPredicted RBP20.46■□□□□ 0.87
CLIP2-206ENST00000487091 FAM163BP0C2L3 166 aa20.46■□□□□ 0.87
CLIP2-206ENST00000487091 STK4Q13043 487 aa20.46■□□□□ 0.87
CLIP2-206ENST00000487091 FAM171BQ6P995 826 aa20.46■□□□□ 0.87
CLIP2-206ENST00000487091 ASCL5Q7RTU5 278 aa20.46■□□□□ 0.87
CLIP2-206ENST00000487091 TMEM174Q8WUU8 243 aa20.46■□□□□ 0.87
CLIP2-206ENST00000487091 KBTBD7Q8WVZ9 684 aa20.46■□□□□ 0.87
CLIP2-206ENST00000487091 CCDC127Q96BQ5 260 aa20.46■□□□□ 0.87
CLIP2-206ENST00000487091 MSANTD3Q96H12 275 aa20.46■□□□□ 0.87
CLIP2-206ENST00000487091 SCAND2PQ9GZW5 306 aaPredicted RBP20.46■□□□□ 0.87
CLIP2-206ENST00000487091 CDH9Q9ULB4 789 aa20.46■□□□□ 0.87
CLIP2-206ENST00000487091 TICRRQ7Z2Z1 1910 aa20.46■□□□□ 0.87
CLIP2-206ENST00000487091 COL4A2P08572 1712 aa20.46■□□□□ 0.87
CLIP2-206ENST00000487091 FAM186AA6NE01 2351 aa20.46■□□□□ 0.87
CLIP2-206ENST00000487091 SOBPA7XYQ1 873 aa20.45■□□□□ 0.86
CLIP2-206ENST00000487091 EXOC3O60645 756 aa20.45■□□□□ 0.86
CLIP2-206ENST00000487091 F11P03951 625 aa20.45■□□□□ 0.86
CLIP2-206ENST00000487091 SP9P0CG40 484 aa20.45■□□□□ 0.86
CLIP2-206ENST00000487091 WARSP23381 471 aaKnown RBP20.45■□□□□ 0.86
CLIP2-206ENST00000487091 CYP2F1P24903 491 aa20.45■□□□□ 0.86
CLIP2-206ENST00000487091 DDX6P26196 483 aaKnown RBP eCLIP20.45■□□□□ 0.86
CLIP2-206ENST00000487091 SYKP43405 635 aa20.45■□□□□ 0.86
CLIP2-206ENST00000487091 NLRP12P59046 1061 aa20.45■□□□□ 0.86
CLIP2-206ENST00000487091 CYP4F8P98187 520 aa20.45■□□□□ 0.86
CLIP2-206ENST00000487091 FZD5Q13467 585 aa20.45■□□□□ 0.86
CLIP2-206ENST00000487091 KMT5BQ4FZB7 885 aa20.45■□□□□ 0.86
CLIP2-206ENST00000487091 SPATA2LQ8IUW3 424 aaPredicted RBP20.45■□□□□ 0.86
CLIP2-206ENST00000487091 SLC9A9Q8IVB4 645 aa20.45■□□□□ 0.86
CLIP2-206ENST00000487091 ZNF687Q8N1G0 1237 aa20.45■□□□□ 0.86
CLIP2-206ENST00000487091 KIAA0895Q8NCT3 520 aa20.45■□□□□ 0.86
CLIP2-206ENST00000487091 CSGALNACT1Q8TDX6 532 aa20.45■□□□□ 0.86
CLIP2-206ENST00000487091 FAM3CQ92520 227 aa20.45■□□□□ 0.86
CLIP2-206ENST00000487091 SLC46A2Q9BY10 475 aa20.45■□□□□ 0.86
CLIP2-206ENST00000487091 GZF1Q9H116 711 aaPredicted RBP20.45■□□□□ 0.86
CLIP2-206ENST00000487091 DMAC2Q9NW81 257 aa20.45■□□□□ 0.86
CLIP2-206ENST00000487091 SPATA6Q9NWH7 488 aaPredicted RBP20.45■□□□□ 0.86
CLIP2-206ENST00000487091 PIAS3Q9Y6X2 628 aa20.45■□□□□ 0.86
CLIP2-206ENST00000487091 MYO15AQ9UKN7 3530 aa20.44■□□□□ 0.86
CLIP2-206ENST00000487091 MYBPHLA2RUH7 354 aa20.44■□□□□ 0.86
CLIP2-206ENST00000487091 STAU1O95793 577 aaKnown RBP20.44■□□□□ 0.86
CLIP2-206ENST00000487091 MAGEA11P43364 429 aa20.44■□□□□ 0.86
CLIP2-206ENST00000487091 GPR15P49685 360 aa20.44■□□□□ 0.86
CLIP2-206ENST00000487091 MAPRE1Q15691 268 aaKnown RBP20.44■□□□□ 0.86
CLIP2-206ENST00000487091 DDR2Q16832 855 aa20.44■□□□□ 0.86
CLIP2-206ENST00000487091 ARHGAP29Q52LW3 1261 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms